RNA–Protein interactions for RNA: ENST00000278947.5

SCN2B-201, Transcript of sodium voltage-gated channel beta subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN2B, Length 5,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2B-201ENST00000278947 DCAF8L2P0C7V8 631 aa23.48■■□□□ 1.35
SCN2B-201ENST00000278947 NISCHQ9Y2I1 1504 aa23.22■■□□□ 1.31
SCN2B-201ENST00000278947 SUPT5HO00267 1087 aaKnown RBP21.64■■□□□ 1.05
SCN2B-201ENST00000278947 SHROOM4Q9ULL8 1493 aa21.53■■□□□ 1.04
SCN2B-201ENST00000278947 PELP1Q8IZL8 1130 aaKnown RBP21.36■■□□□ 1.01
SCN2B-201ENST00000278947 FAM9AQ8IZU1 332 aaPredicted RBP21.16■□□□□ 0.98
SCN2B-201ENST00000278947 APLP2Q06481 763 aa20.8■□□□□ 0.92
SCN2B-201ENST00000278947 MYT1Q01538 1121 aa20.79■□□□□ 0.92
SCN2B-201ENST00000278947 EHMT2Q96KQ7 1210 aa20.65■□□□□ 0.9
SCN2B-201ENST00000278947 ERICH6Q7L0X2 663 aa20.61■□□□□ 0.89
SCN2B-201ENST00000278947 ABCC9O60706 1549 aa20.34■□□□□ 0.85
SCN2B-201ENST00000278947 CCER1Q8TC90 406 aaPredicted RBP20.33■□□□□ 0.85
SCN2B-201ENST00000278947 CENPBP07199 599 aaPredicted RBP20.31■□□□□ 0.84
SCN2B-201ENST00000278947 TRIM41Q8WV44 630 aa20.3■□□□□ 0.84
SCN2B-201ENST00000278947 ATP1B4Q9UN42 357 aaPredicted RBP20.17■□□□□ 0.82
SCN2B-201ENST00000278947 RANGAP1P46060 587 aaPredicted RBP20.12■□□□□ 0.81
SCN2B-201ENST00000278947 UBTFP17480 764 aaKnown RBP20.07■□□□□ 0.8
SCN2B-201ENST00000278947 PCGF6Q9BYE7 350 aa20.01■□□□□ 0.79
SCN2B-201ENST00000278947 PABPN1Q86U42 306 aaKnown RBP eCLIP19.95■□□□□ 0.78
SCN2B-201ENST00000278947 TTBK1Q5TCY1 1321 aaPredicted RBP19.87■□□□□ 0.77
SCN2B-201ENST00000278947 ZEB1P37275 1124 aaPredicted RBP19.82■□□□□ 0.76
SCN2B-201ENST00000278947 NEFLP07196 543 aa19.76■□□□□ 0.75
SCN2B-201ENST00000278947 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.72■□□□□ 0.75
SCN2B-201ENST00000278947 HNRNPUL2Q1KMD3 747 aaKnown RBP19.72■□□□□ 0.75
SCN2B-201ENST00000278947 YTHDC1Q96MU7 727 aaKnown RBP19.71■□□□□ 0.75
SCN2B-201ENST00000278947 MYT1LQ9UL68 1186 aa19.71■□□□□ 0.75
SCN2B-201ENST00000278947 CCDC180Q9P1Z9 1646 aa19.52■□□□□ 0.72
SCN2B-201ENST00000278947 DAXXQ9UER7 740 aaPredicted RBP19.36■□□□□ 0.69
SCN2B-201ENST00000278947 SCRIBQ14160 1630 aa19.3■□□□□ 0.68
SCN2B-201ENST00000278947 FBLN2P98095 1184 aa19.3■□□□□ 0.68
SCN2B-201ENST00000278947 RB1CC1Q8TDY2 1594 aa19.29■□□□□ 0.68
SCN2B-201ENST00000278947 ZCCHC6Q5VYS8 1495 aaKnown RBP19.17■□□□□ 0.66
SCN2B-201ENST00000278947 RTL5Q5HYW3 569 aaPredicted RBP19.17■□□□□ 0.66
SCN2B-201ENST00000278947 ITGAEP38570 1179 aa19.15■□□□□ 0.66
SCN2B-201ENST00000278947 HRCP23327 699 aa19.11■□□□□ 0.65
SCN2B-201ENST00000278947 CHIC1Q5VXU3 224 aa19.11■□□□□ 0.65
SCN2B-201ENST00000278947 PPARGC1BQ86YN6 1023 aaKnown RBP19.04■□□□□ 0.64
SCN2B-201ENST00000278947 NACADO15069 1562 aa19.04■□□□□ 0.64
SCN2B-201ENST00000278947 TRIM26Q12899 539 aaPredicted RBP18.97■□□□□ 0.63
SCN2B-201ENST00000278947 NPM1P06748 294 aaKnown RBP eCLIP18.92■□□□□ 0.62
SCN2B-201ENST00000278947 FAM50AQ14320 339 aaKnown RBP18.91■□□□□ 0.62
SCN2B-201ENST00000278947 ZNF316A6NFI3 1004 aaPredicted RBP18.9■□□□□ 0.62
SCN2B-201ENST00000278947 CDK11AQ9UQ88 783 aaPredicted RBP18.87■□□□□ 0.61
SCN2B-201ENST00000278947 LOC105371045A0A1W2PR82 267 aa18.86■□□□□ 0.61
SCN2B-201ENST00000278947 POLR3GLQ9BT43 218 aa18.85■□□□□ 0.61
SCN2B-201ENST00000278947 TRIM52Q96A61 297 aa18.82■□□□□ 0.6
SCN2B-201ENST00000278947 SLC4A1APQ9BWU0 796 aaKnown RBP18.78■□□□□ 0.6
SCN2B-201ENST00000278947 ESF1Q9H501 851 aaKnown RBP18.76■□□□□ 0.59
SCN2B-201ENST00000278947 CSRNP3Q8WYN3 585 aa18.75■□□□□ 0.59
SCN2B-201ENST00000278947 GTF3C3Q9Y5Q9 886 aa18.69■□□□□ 0.58
SCN2B-201ENST00000278947 CHMP7Q8WUX9 453 aaPredicted RBP18.67■□□□□ 0.58
SCN2B-201ENST00000278947 P3H3Q8IVL6 736 aa18.67■□□□□ 0.58
SCN2B-201ENST00000278947 CLSPNQ9HAW4 1339 aa18.64■□□□□ 0.57
SCN2B-201ENST00000278947 EIF5BO60841 1220 aaKnown RBP18.63■□□□□ 0.57
SCN2B-201ENST00000278947 BCANQ96GW7 911 aa18.63■□□□□ 0.57
SCN2B-201ENST00000278947 BAZ1BQ9UIG0 1483 aaKnown RBP18.63■□□□□ 0.57
SCN2B-201ENST00000278947 DIEXFQ68CQ4 756 aaKnown RBP18.62■□□□□ 0.57
SCN2B-201ENST00000278947 ERCC6Q03468 1493 aa18.61■□□□□ 0.57
SCN2B-201ENST00000278947 ARID3CA6NKF2 412 aa18.61■□□□□ 0.57
SCN2B-201ENST00000278947 ZNF777Q9ULD5 760 aaPredicted RBP18.58■□□□□ 0.57
SCN2B-201ENST00000278947 CNGB1Q14028 1251 aaPredicted RBP18.51■□□□□ 0.55
SCN2B-201ENST00000278947 DCAF1Q9Y4B6 1507 aa18.51■□□□□ 0.55
SCN2B-201ENST00000278947 GLIPR1L2Q4G1C9 344 aa18.49■□□□□ 0.55
SCN2B-201ENST00000278947 STAG3Q9UJ98 1225 aa18.45■□□□□ 0.54
SCN2B-201ENST00000278947 BAZ1AQ9NRL2 1556 aaPredicted RBP18.41■□□□□ 0.54
SCN2B-201ENST00000278947 ZNF326Q5BKZ1 582 aaKnown RBP18.41■□□□□ 0.54
SCN2B-201ENST00000278947 NEUROD1Q13562 356 aa18.4■□□□□ 0.54
SCN2B-201ENST00000278947 RSF1Q96T23 1441 aaPredicted RBP18.32■□□□□ 0.52
SCN2B-201ENST00000278947 PLPPR3Q6T4P5 718 aa18.29■□□□□ 0.52
SCN2B-201ENST00000278947 NEFMP07197 916 aa18.28■□□□□ 0.52
SCN2B-201ENST00000278947 ACIN1Q9UKV3 1341 aaKnown RBP18.28■□□□□ 0.52
SCN2B-201ENST00000278947 TSPY4P0CV99 314 aa18.28■□□□□ 0.52
SCN2B-201ENST00000278947 TSPY10P0CW01 314 aa18.28■□□□□ 0.52
SCN2B-201ENST00000278947 CHGAP10645 457 aaKnown RBP18.27■□□□□ 0.51
SCN2B-201ENST00000278947 EEA1Q15075 1411 aa18.26■□□□□ 0.51
SCN2B-201ENST00000278947 ANP32AP39687 249 aaKnown RBP18.24■□□□□ 0.51
SCN2B-201ENST00000278947 KIF27Q86VH2 1401 aa18.23■□□□□ 0.51
SCN2B-201ENST00000278947 WRNQ14191 1432 aaPredicted RBP eCLIP18.23■□□□□ 0.51
SCN2B-201ENST00000278947 PLEKHD1A6NEE1 506 aa18.23■□□□□ 0.51
SCN2B-201ENST00000278947 MTUS2Q5JR59 1369 aa18.22■□□□□ 0.51
SCN2B-201ENST00000278947 SMARCA2P51531 1590 aa18.22■□□□□ 0.51
SCN2B-201ENST00000278947 PDS5BQ9NTI5 1447 aa18.21■□□□□ 0.51
SCN2B-201ENST00000278947 MYO15BQ96JP2 1530 aa18.15■□□□□ 0.5
SCN2B-201ENST00000278947 KCNH8Q96L42 1107 aa18.14■□□□□ 0.49
SCN2B-201ENST00000278947 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.11■□□□□ 0.49
SCN2B-201ENST00000278947 SLC24A1O60721 1099 aa18.1■□□□□ 0.49
SCN2B-201ENST00000278947 NPM2Q86SE8 214 aaKnown RBP18.09■□□□□ 0.49
SCN2B-201ENST00000278947 ANP32CO43423 234 aa18.08■□□□□ 0.49
SCN2B-201ENST00000278947 GOLGA3Q08378 1498 aa18.08■□□□□ 0.48
SCN2B-201ENST00000278947 ARID4BQ4LE39 1312 aaPredicted RBP18.08■□□□□ 0.48
SCN2B-201ENST00000278947 ANP32BQ92688 251 aaKnown RBP18.08■□□□□ 0.48
SCN2B-201ENST00000278947 CLIP1P30622 1438 aa18.06■□□□□ 0.48
SCN2B-201ENST00000278947 ZBTB47Q9UFB7 747 aaPredicted RBP18.05■□□□□ 0.48
SCN2B-201ENST00000278947 CECR2Q9BXF3 1484 aa18.05■□□□□ 0.48
SCN2B-201ENST00000278947 TRHP20396 242 aaPredicted RBP18.03■□□□□ 0.48
SCN2B-201ENST00000278947 TONSLQ96HA7 1378 aa18.02■□□□□ 0.48
SCN2B-201ENST00000278947 CHIC2Q9UKJ5 165 aa18.01■□□□□ 0.47
SCN2B-201ENST00000278947 PPP1R15AO75807 674 aaPredicted RBP17.99■□□□□ 0.47
SCN2B-201ENST00000278947 CEP164Q9UPV0 1460 aa17.97■□□□□ 0.47
SCN2B-201ENST00000278947 NBR1Q14596 966 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms