RNA–Protein interactions for RNA: ENST00000506352.5

APBB2-211, Transcript of amyloid beta precursor protein binding family B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene APBB2, Length 3,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APBB2-211ENST00000506352 NISCHQ9Y2I1 1504 aa27.95■■■□□ 2.06
APBB2-211ENST00000506352 SHROOM4Q9ULL8 1493 aa24.79■■□□□ 1.56
APBB2-211ENST00000506352 SUPT5HO00267 1087 aaKnown RBP24.44■■□□□ 1.5
APBB2-211ENST00000506352 DCAF8L2P0C7V8 631 aa24.14■■□□□ 1.45
APBB2-211ENST00000506352 ZCCHC6Q5VYS8 1495 aaKnown RBP23.6■■□□□ 1.37
APBB2-211ENST00000506352 CHIC1Q5VXU3 224 aa23.49■■□□□ 1.35
APBB2-211ENST00000506352 MYO15BQ96JP2 1530 aa23.39■■□□□ 1.34
APBB2-211ENST00000506352 CCDC180Q9P1Z9 1646 aa23.31■■□□□ 1.32
APBB2-211ENST00000506352 PCGF6Q9BYE7 350 aa23.29■■□□□ 1.32
APBB2-211ENST00000506352 LOC105371045A0A1W2PR82 267 aa23.11■■□□□ 1.29
APBB2-211ENST00000506352 HRCP23327 699 aa23.1■■□□□ 1.29
APBB2-211ENST00000506352 PPARGC1BQ86YN6 1023 aaKnown RBP22.98■■□□□ 1.27
APBB2-211ENST00000506352 EHMT2Q96KQ7 1210 aa22.81■■□□□ 1.24
APBB2-211ENST00000506352 FAM9AQ8IZU1 332 aaPredicted RBP22.71■■□□□ 1.23
APBB2-211ENST00000506352 DCAF1Q9Y4B6 1507 aa22.56■■□□□ 1.2
APBB2-211ENST00000506352 TRIM41Q8WV44 630 aa22.52■■□□□ 1.2
APBB2-211ENST00000506352 SCRIBQ14160 1630 aa22.47■■□□□ 1.19
APBB2-211ENST00000506352 TRIM26Q12899 539 aaPredicted RBP22.47■■□□□ 1.19
APBB2-211ENST00000506352 RSF1Q96T23 1441 aaPredicted RBP22.34■■□□□ 1.17
APBB2-211ENST00000506352 ABCC9O60706 1549 aa22.28■■□□□ 1.16
APBB2-211ENST00000506352 RB1CC1Q8TDY2 1594 aa22.17■■□□□ 1.14
APBB2-211ENST00000506352 TTBK1Q5TCY1 1321 aaPredicted RBP22.07■■□□□ 1.12
APBB2-211ENST00000506352 CECR2Q9BXF3 1484 aa22.06■■□□□ 1.12
APBB2-211ENST00000506352 ZEB1P37275 1124 aaPredicted RBP21.93■■□□□ 1.1
APBB2-211ENST00000506352 MROH2BQ7Z745 1585 aa21.9■■□□□ 1.1
APBB2-211ENST00000506352 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.86■■□□□ 1.09
APBB2-211ENST00000506352 WIZO95785 1651 aa21.8■■□□□ 1.08
APBB2-211ENST00000506352 CCER1Q8TC90 406 aaPredicted RBP21.76■■□□□ 1.07
APBB2-211ENST00000506352 NACADO15069 1562 aa21.68■■□□□ 1.06
APBB2-211ENST00000506352 UBTFP17480 764 aaKnown RBP21.56■■□□□ 1.04
APBB2-211ENST00000506352 SCAF1Q9H7N4 1312 aaKnown RBP21.56■■□□□ 1.04
APBB2-211ENST00000506352 ABCC8Q09428 1581 aa21.54■■□□□ 1.04
APBB2-211ENST00000506352 PABPN1Q86U42 306 aaKnown RBP eCLIP21.52■■□□□ 1.04
APBB2-211ENST00000506352 CCDC88BA6NC98 1476 aa21.47■■□□□ 1.03
APBB2-211ENST00000506352 RANGAP1P46060 587 aaPredicted RBP21.46■■□□□ 1.03
APBB2-211ENST00000506352 BAZ1AQ9NRL2 1556 aaPredicted RBP21.42■■□□□ 1.02
APBB2-211ENST00000506352 SOGA1O94964 1423 aa21.41■■□□□ 1.02
APBB2-211ENST00000506352 DIEXFQ68CQ4 756 aaKnown RBP21.34■■□□□ 1.01
APBB2-211ENST00000506352 CSRNP3Q8WYN3 585 aa21.33■■□□□ 1
APBB2-211ENST00000506352 CEP162Q5TB80 1403 aa21.33■■□□□ 1
APBB2-211ENST00000506352 RUSC2Q8N2Y8 1516 aa21.31■■□□□ 1
APBB2-211ENST00000506352 HNRNPUL2Q1KMD3 747 aaKnown RBP21.29■■□□□ 1
APBB2-211ENST00000506352 NEUROD1Q13562 356 aa21.29■■□□□ 1
APBB2-211ENST00000506352 TOP2AP11388 1531 aaKnown RBP21.24■□□□□ 0.99
APBB2-211ENST00000506352 SMARCA4P51532 1647 aa21.22■□□□□ 0.99
APBB2-211ENST00000506352 EIF4G1Q04637 1599 aaKnown RBP21.22■□□□□ 0.99
APBB2-211ENST00000506352 YTHDC1Q96MU7 727 aaKnown RBP21.21■□□□□ 0.99
APBB2-211ENST00000506352 SMARCA2P51531 1590 aa21.2■□□□□ 0.98
APBB2-211ENST00000506352 ACIN1Q9UKV3 1341 aaKnown RBP21.2■□□□□ 0.98
APBB2-211ENST00000506352 TNIKQ9UKE5 1360 aa21.14■□□□□ 0.98
APBB2-211ENST00000506352 GTF3C3Q9Y5Q9 886 aa21.14■□□□□ 0.97
APBB2-211ENST00000506352 CENPBP07199 599 aaPredicted RBP21.08■□□□□ 0.97
APBB2-211ENST00000506352 APLP2Q06481 763 aa21.07■□□□□ 0.96
APBB2-211ENST00000506352 WRNQ14191 1432 aaPredicted RBP eCLIP21.06■□□□□ 0.96
APBB2-211ENST00000506352 UNC13AQ9UPW8 1703 aa21.02■□□□□ 0.96
APBB2-211ENST00000506352 ZNF316A6NFI3 1004 aaPredicted RBP21.02■□□□□ 0.96
APBB2-211ENST00000506352 PELP1Q8IZL8 1130 aaKnown RBP21.01■□□□□ 0.95
APBB2-211ENST00000506352 GOLGA3Q08378 1498 aa21■□□□□ 0.95
APBB2-211ENST00000506352 EEA1Q15075 1411 aa20.94■□□□□ 0.94
APBB2-211ENST00000506352 CLIP1P30622 1438 aa20.92■□□□□ 0.94
APBB2-211ENST00000506352 MIER1Q8N108 512 aa20.89■□□□□ 0.93
APBB2-211ENST00000506352 SYNJ1O43426 1573 aa20.84■□□□□ 0.93
APBB2-211ENST00000506352 CEP164Q9UPV0 1460 aa20.83■□□□□ 0.92
APBB2-211ENST00000506352 RAPGEF2Q9Y4G8 1499 aa20.8■□□□□ 0.92
APBB2-211ENST00000506352 BICRAQ9NZM4 1560 aa20.8■□□□□ 0.92
APBB2-211ENST00000506352 ITGAEP38570 1179 aa20.79■□□□□ 0.92
APBB2-211ENST00000506352 BAZ1BQ9UIG0 1483 aaKnown RBP20.77■□□□□ 0.91
APBB2-211ENST00000506352 ATAD2BQ9ULI0 1458 aa20.72■□□□□ 0.91
APBB2-211ENST00000506352 VPS8Q8N3P4 1428 aa20.72■□□□□ 0.91
APBB2-211ENST00000506352 KANK4Q5T7N3 995 aaPredicted RBP20.67■□□□□ 0.9
APBB2-211ENST00000506352 KIF21BO75037 1637 aa20.6■□□□□ 0.89
APBB2-211ENST00000506352 ATP1B4Q9UN42 357 aaPredicted RBP20.54■□□□□ 0.88
APBB2-211ENST00000506352 PEG3Q9GZU2 1588 aa20.53■□□□□ 0.88
APBB2-211ENST00000506352 P3H3Q8IVL6 736 aa20.45■□□□□ 0.86
APBB2-211ENST00000506352 DHX57Q6P158 1386 aaKnown RBP20.45■□□□□ 0.86
APBB2-211ENST00000506352 TOP2BQ02880 1626 aa20.41■□□□□ 0.86
APBB2-211ENST00000506352 ARAP1Q96P48 1450 aa20.4■□□□□ 0.86
APBB2-211ENST00000506352 FAM50AQ14320 339 aaKnown RBP20.36■□□□□ 0.85
APBB2-211ENST00000506352 KIF27Q86VH2 1401 aa20.35■□□□□ 0.85
APBB2-211ENST00000506352 PRXQ9BXM0 1461 aa20.34■□□□□ 0.85
APBB2-211ENST00000506352 CUX1P39880 1505 aa20.32■□□□□ 0.84
APBB2-211ENST00000506352 KCNH8Q96L42 1107 aa20.3■□□□□ 0.84
APBB2-211ENST00000506352 CCNB3Q8WWL7 1395 aa20.29■□□□□ 0.84
APBB2-211ENST00000506352 HIRIP3Q9BW71 556 aaPredicted RBP20.29■□□□□ 0.84
APBB2-211ENST00000506352 SIN3AQ96ST3 1273 aa20.25■□□□□ 0.83
APBB2-211ENST00000506352 CUX2O14529 1486 aa20.23■□□□□ 0.83
APBB2-211ENST00000506352 CLSPNQ9HAW4 1339 aa20.23■□□□□ 0.83
APBB2-211ENST00000506352 ERICH3Q5RHP9 1530 aa20.23■□□□□ 0.83
APBB2-211ENST00000506352 ARHGAP35Q9NRY4 1499 aa20.23■□□□□ 0.83
APBB2-211ENST00000506352 BIVM-ERCC5R4GMW8 1640 aa20.22■□□□□ 0.83
APBB2-211ENST00000506352 DDX10Q13206 875 aaKnown RBP20.2■□□□□ 0.82
APBB2-211ENST00000506352 BCANQ96GW7 911 aa20.2■□□□□ 0.82
APBB2-211ENST00000506352 RAB3GAP2Q9H2M9 1393 aa20.2■□□□□ 0.82
APBB2-211ENST00000506352 SUPT16HQ9Y5B9 1047 aaKnown RBP20.18■□□□□ 0.82
APBB2-211ENST00000506352 RRBP1Q9P2E9 1410 aaKnown RBP20.16■□□□□ 0.82
APBB2-211ENST00000506352 NCAPD3P42695 1498 aa20.16■□□□□ 0.82
APBB2-211ENST00000506352 IGF1RP08069 1367 aa20.14■□□□□ 0.81
APBB2-211ENST00000506352 CARMIL1Q5VZK9 1371 aa20.13■□□□□ 0.81
APBB2-211ENST00000506352 CFTRP13569 1480 aa20.11■□□□□ 0.81
APBB2-211ENST00000506352 PHLDB1Q86UU1 1377 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms