RNA–Protein interactions for RNA: ENST00000556017.1

CHMP4BP1-201, Transcript of charged multivesicular body protein 4B pseudogene 1, humanhuman

BASIC

Gene CHMP4BP1, Length 588 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1-201ENST00000556017 NISCHQ9Y2I1 1504 aa36.58■■■■□ 3.45
CHMP4BP1-201ENST00000556017 ABCC9O60706 1549 aa32.92■■■□□ 2.86
CHMP4BP1-201ENST00000556017 CCDC180Q9P1Z9 1646 aa32.88■■■□□ 2.85
CHMP4BP1-201ENST00000556017 RB1CC1Q8TDY2 1594 aa31.27■■■□□ 2.6
CHMP4BP1-201ENST00000556017 DNAJC5BQ9UF47 199 aa31.09■■■□□ 2.57
CHMP4BP1-201ENST00000556017 NACADO15069 1562 aa31.06■■■□□ 2.56
CHMP4BP1-201ENST00000556017 UNC13AQ9UPW8 1703 aa30.75■■■□□ 2.51
CHMP4BP1-201ENST00000556017 DCAF8L2P0C7V8 631 aa30.71■■■□□ 2.51
CHMP4BP1-201ENST00000556017 MYO15BQ96JP2 1530 aa30.63■■■□□ 2.49
CHMP4BP1-201ENST00000556017 PABPN1Q86U42 306 aaKnown RBP eCLIP30.61■■■□□ 2.49
CHMP4BP1-201ENST00000556017 BICRAQ9NZM4 1560 aa30.53■■■□□ 2.48
CHMP4BP1-201ENST00000556017 ZCCHC6Q5VYS8 1495 aaKnown RBP30.31■■■□□ 2.44
CHMP4BP1-201ENST00000556017 DCAF1Q9Y4B6 1507 aa30.22■■■□□ 2.43
CHMP4BP1-201ENST00000556017 SHROOM4Q9ULL8 1493 aa29.95■■■□□ 2.39
CHMP4BP1-201ENST00000556017 SCRIBQ14160 1630 aa29.92■■■□□ 2.38
CHMP4BP1-201ENST00000556017 CC2D2AQ9P2K1 1620 aa29.78■■■□□ 2.36
CHMP4BP1-201ENST00000556017 EIF4G1Q04637 1599 aaKnown RBP29.69■■■□□ 2.34
CHMP4BP1-201ENST00000556017 CECR2Q9BXF3 1484 aa29.65■■■□□ 2.34
CHMP4BP1-201ENST00000556017 NCAPD3P42695 1498 aa28.71■■■□□ 2.19
CHMP4BP1-201ENST00000556017 ATAD2BQ9ULI0 1458 aa28.6■■■□□ 2.17
CHMP4BP1-201ENST00000556017 SMARCA4P51532 1647 aa28.57■■■□□ 2.16
CHMP4BP1-201ENST00000556017 DNAJC5Q9H3Z4 198 aa28.51■■■□□ 2.15
CHMP4BP1-201ENST00000556017 HMGXB3Q12766 1538 aa28.48■■■□□ 2.15
CHMP4BP1-201ENST00000556017 SMARCA2P51531 1590 aa28.46■■■□□ 2.15
CHMP4BP1-201ENST00000556017 CUX2O14529 1486 aa28.4■■■□□ 2.14
CHMP4BP1-201ENST00000556017 BAZ1AQ9NRL2 1556 aaPredicted RBP28.35■■■□□ 2.13
CHMP4BP1-201ENST00000556017 ERCC6Q03468 1493 aa28.33■■■□□ 2.13
CHMP4BP1-201ENST00000556017 PEG3Q9GZU2 1588 aa28.33■■■□□ 2.12
CHMP4BP1-201ENST00000556017 NESP48681 1621 aa28.32■■■□□ 2.12
CHMP4BP1-201ENST00000556017 BAZ1BQ9UIG0 1483 aaKnown RBP28.25■■■□□ 2.11
CHMP4BP1-201ENST00000556017 MROH2BQ7Z745 1585 aa28.22■■■□□ 2.11
CHMP4BP1-201ENST00000556017 THOC2Q8NI27 1593 aaKnown RBP28.07■■■□□ 2.08
CHMP4BP1-201ENST00000556017 LAMC3Q9Y6N6 1575 aa28.04■■■□□ 2.08
CHMP4BP1-201ENST00000556017 KIF21AQ7Z4S6 1674 aa27.97■■■□□ 2.07
CHMP4BP1-201ENST00000556017 WIZO95785 1651 aa27.87■■■□□ 2.05
CHMP4BP1-201ENST00000556017 PDS5BQ9NTI5 1447 aa27.81■■■□□ 2.04
CHMP4BP1-201ENST00000556017 CADPSQ9ULU8 1353 aa27.78■■■□□ 2.04
CHMP4BP1-201ENST00000556017 MRC2Q9UBG0 1479 aa27.64■■■□□ 2.01
CHMP4BP1-201ENST00000556017 WDR62O43379 1518 aa27.62■■■□□ 2.01
CHMP4BP1-201ENST00000556017 RSF1Q96T23 1441 aaPredicted RBP27.57■■■□□ 2
CHMP4BP1-201ENST00000556017 CFTRP13569 1480 aa27.49■■□□□ 1.99
CHMP4BP1-201ENST00000556017 CEP164Q9UPV0 1460 aa27.48■■□□□ 1.99
CHMP4BP1-201ENST00000556017 FANCD2Q9BXW9 1451 aa27.47■■□□□ 1.99
CHMP4BP1-201ENST00000556017 TOP2AP11388 1531 aaKnown RBP27.46■■□□□ 1.99
CHMP4BP1-201ENST00000556017 URB2Q14146 1524 aaKnown RBP27.32■■□□□ 1.96
CHMP4BP1-201ENST00000556017 PRDM2Q13029 1718 aa27.24■■□□□ 1.95
CHMP4BP1-201ENST00000556017 CCDC88BA6NC98 1476 aa27.17■■□□□ 1.94
CHMP4BP1-201ENST00000556017 TRIM41Q8WV44 630 aa27.11■■□□□ 1.93
CHMP4BP1-201ENST00000556017 OSCARQ8IYS5 282 aa27.01■■□□□ 1.91
CHMP4BP1-201ENST00000556017 ZNF608Q9ULD9 1512 aaPredicted RBP27■■□□□ 1.91
CHMP4BP1-201ENST00000556017 TOPBP1Q92547 1522 aa26.97■■□□□ 1.91
CHMP4BP1-201ENST00000556017 IFT140Q96RY7 1462 aa26.93■■□□□ 1.9
CHMP4BP1-201ENST00000556017 DNMBPQ6XZF7 1577 aa26.85■■□□□ 1.89
CHMP4BP1-201ENST00000556017 EIF4G3O43432 1585 aaKnown RBP26.83■■□□□ 1.89
CHMP4BP1-201ENST00000556017 ABCC8Q09428 1581 aa26.81■■□□□ 1.88
CHMP4BP1-201ENST00000556017 RIMBP3CA6NJZ7 1639 aa26.8■■□□□ 1.88
CHMP4BP1-201ENST00000556017 RIMBP3BA6NNM3 1639 aa26.8■■□□□ 1.88
CHMP4BP1-201ENST00000556017 TARBP1Q13395 1621 aaKnown RBP26.8■■□□□ 1.88
CHMP4BP1-201ENST00000556017 RIMBP3Q9UFD9 1639 aa26.8■■□□□ 1.88
CHMP4BP1-201ENST00000556017 POLA1P09884 1462 aaPredicted RBP26.7■■□□□ 1.87
CHMP4BP1-201ENST00000556017 AQRO60306 1485 aaKnown RBP eCLIP26.69■■□□□ 1.86
CHMP4BP1-201ENST00000556017 ARHGEF11O15085 1522 aa26.69■■□□□ 1.86
CHMP4BP1-201ENST00000556017 CHD1O14646 1710 aa26.67■■□□□ 1.86
CHMP4BP1-201ENST00000556017 RAD54L2Q9Y4B4 1467 aa26.6■■□□□ 1.85
CHMP4BP1-201ENST00000556017 CUX1P39880 1505 aa26.5■■□□□ 1.83
CHMP4BP1-201ENST00000556017 SOGA1O94964 1423 aa26.5■■□□□ 1.83
CHMP4BP1-201ENST00000556017 FGD5Q6ZNL6 1462 aa26.49■■□□□ 1.83
CHMP4BP1-201ENST00000556017 TDRD9Q8NDG6 1382 aaKnown RBP26.49■■□□□ 1.83
CHMP4BP1-201ENST00000556017 ARAP1Q96P48 1450 aa26.45■■□□□ 1.82
CHMP4BP1-201ENST00000556017 WDR97A6NE52 1622 aa26.43■■□□□ 1.82
CHMP4BP1-201ENST00000556017 CYB5RLQ6IPT4 315 aa26.4■■□□□ 1.82
CHMP4BP1-201ENST00000556017 SNAPC4Q5SXM2 1469 aa26.4■■□□□ 1.82
CHMP4BP1-201ENST00000556017 FBLN2P98095 1184 aa26.38■■□□□ 1.81
CHMP4BP1-201ENST00000556017 CLASP1Q7Z460 1538 aa26.37■■□□□ 1.81
CHMP4BP1-201ENST00000556017 MAGI1Q96QZ7 1491 aaPredicted RBP26.31■■□□□ 1.8
CHMP4BP1-201ENST00000556017 GRIN2BQ13224 1484 aa26.3■■□□□ 1.8
CHMP4BP1-201ENST00000556017 PBRM1Q86U86 1689 aa26.26■■□□□ 1.79
CHMP4BP1-201ENST00000556017 SYNJ2O15056 1496 aa26.23■■□□□ 1.79
CHMP4BP1-201ENST00000556017 SYNJ1O43426 1573 aa26.23■■□□□ 1.79
CHMP4BP1-201ENST00000556017 ABCA5Q8WWZ7 1642 aa26.21■■□□□ 1.79
CHMP4BP1-201ENST00000556017 GAPVD1Q14C86 1478 aa26.2■■□□□ 1.78
CHMP4BP1-201ENST00000556017 CHMP7Q8WUX9 453 aaPredicted RBP26.2■■□□□ 1.78
CHMP4BP1-201ENST00000556017 ABCA10Q8WWZ4 1543 aa26.19■■□□□ 1.78
CHMP4BP1-201ENST00000556017 SUPT5HO00267 1087 aaKnown RBP26.12■■□□□ 1.77
CHMP4BP1-201ENST00000556017 BIVM-ERCC5R4GMW8 1640 aa26.06■■□□□ 1.76
CHMP4BP1-201ENST00000556017 TRHP20396 242 aaPredicted RBP26.05■■□□□ 1.76
CHMP4BP1-201ENST00000556017 TOP2BQ02880 1626 aa26.03■■□□□ 1.76
CHMP4BP1-201ENST00000556017 WRNQ14191 1432 aaPredicted RBP eCLIP26■■□□□ 1.75
CHMP4BP1-201ENST00000556017 ADAMTS12P58397 1594 aa25.99■■□□□ 1.75
CHMP4BP1-201ENST00000556017 ERCC6L2Q5T890 1561 aa25.99■■□□□ 1.75
CHMP4BP1-201ENST00000556017 GRIN2AQ12879 1464 aa25.98■■□□□ 1.75
CHMP4BP1-201ENST00000556017 CEP170Q5SW79 1584 aa25.95■■□□□ 1.75
CHMP4BP1-201ENST00000556017 NUP160Q12769 1436 aa25.94■■□□□ 1.74
CHMP4BP1-201ENST00000556017 SHROOM2Q13796 1616 aa25.88■■□□□ 1.73
CHMP4BP1-201ENST00000556017 ERICH3Q5RHP9 1530 aa25.85■■□□□ 1.73
CHMP4BP1-201ENST00000556017 FHAD1B1AJZ9 1412 aa25.85■■□□□ 1.73
CHMP4BP1-201ENST00000556017 RUSC2Q8N2Y8 1516 aa25.64■■□□□ 1.7
CHMP4BP1-201ENST00000556017 PRG4Q92954 1404 aaPredicted RBP25.63■■□□□ 1.69
CHMP4BP1-201ENST00000556017 KIF13AQ9H1H9 1805 aa25.6■■□□□ 1.69
CHMP4BP1-201ENST00000556017 JPH4Q96JJ6 628 aa25.59■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 182.2 ms