RNA–Protein interactions for RNA: ENST00000616382.4

FMR1-215, Transcript of fragile X mental retardation 1, humanhuman

TSL 5 BASIC

Gene FMR1, Length 1,648 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FMR1-215ENST00000616382 NISCHQ9Y2I1 1504 aa33.84■■■■□ 3.01
FMR1-215ENST00000616382 CCDC180Q9P1Z9 1646 aa30.23■■■□□ 2.43
FMR1-215ENST00000616382 ABCC9O60706 1549 aa29.87■■■□□ 2.37
FMR1-215ENST00000616382 RB1CC1Q8TDY2 1594 aa28.65■■■□□ 2.18
FMR1-215ENST00000616382 NACADO15069 1562 aa28.55■■■□□ 2.16
FMR1-215ENST00000616382 DCAF8L2P0C7V8 631 aa28.45■■■□□ 2.14
FMR1-215ENST00000616382 MYO15BQ96JP2 1530 aa28.3■■■□□ 2.12
FMR1-215ENST00000616382 ZCCHC6Q5VYS8 1495 aaKnown RBP28.09■■■□□ 2.09
FMR1-215ENST00000616382 DCAF1Q9Y4B6 1507 aa28.03■■■□□ 2.08
FMR1-215ENST00000616382 PABPN1Q86U42 306 aaKnown RBP eCLIP27.88■■■□□ 2.05
FMR1-215ENST00000616382 UNC13AQ9UPW8 1703 aa27.85■■■□□ 2.05
FMR1-215ENST00000616382 DNAJC5BQ9UF47 199 aa27.71■■■□□ 2.03
FMR1-215ENST00000616382 BICRAQ9NZM4 1560 aa27.7■■■□□ 2.02
FMR1-215ENST00000616382 SHROOM4Q9ULL8 1493 aa27.54■■■□□ 2
FMR1-215ENST00000616382 SCRIBQ14160 1630 aa27.49■■□□□ 1.99
FMR1-215ENST00000616382 EIF4G1Q04637 1599 aaKnown RBP27.04■■□□□ 1.92
FMR1-215ENST00000616382 CC2D2AQ9P2K1 1620 aa27■■□□□ 1.91
FMR1-215ENST00000616382 CECR2Q9BXF3 1484 aa26.93■■□□□ 1.9
FMR1-215ENST00000616382 NCAPD3P42695 1498 aa26.35■■□□□ 1.81
FMR1-215ENST00000616382 SMARCA4P51532 1647 aa26.29■■□□□ 1.8
FMR1-215ENST00000616382 ATAD2BQ9ULI0 1458 aa26.28■■□□□ 1.8
FMR1-215ENST00000616382 BAZ1AQ9NRL2 1556 aaPredicted RBP26.27■■□□□ 1.8
FMR1-215ENST00000616382 SMARCA2P51531 1590 aa26.26■■□□□ 1.79
FMR1-215ENST00000616382 HMGXB3Q12766 1538 aa26.17■■□□□ 1.78
FMR1-215ENST00000616382 PEG3Q9GZU2 1588 aa26.09■■□□□ 1.77
FMR1-215ENST00000616382 BAZ1BQ9UIG0 1483 aaKnown RBP26.06■■□□□ 1.76
FMR1-215ENST00000616382 MROH2BQ7Z745 1585 aa26.02■■□□□ 1.76
FMR1-215ENST00000616382 ERCC6Q03468 1493 aa25.84■■□□□ 1.73
FMR1-215ENST00000616382 NESP48681 1621 aa25.71■■□□□ 1.71
FMR1-215ENST00000616382 CUX2O14529 1486 aa25.71■■□□□ 1.71
FMR1-215ENST00000616382 WIZO95785 1651 aa25.69■■□□□ 1.7
FMR1-215ENST00000616382 LAMC3Q9Y6N6 1575 aa25.69■■□□□ 1.7
FMR1-215ENST00000616382 RSF1Q96T23 1441 aaPredicted RBP25.64■■□□□ 1.69
FMR1-215ENST00000616382 PDS5BQ9NTI5 1447 aa25.59■■□□□ 1.69
FMR1-215ENST00000616382 CADPSQ9ULU8 1353 aa25.57■■□□□ 1.68
FMR1-215ENST00000616382 TOP2AP11388 1531 aaKnown RBP25.47■■□□□ 1.67
FMR1-215ENST00000616382 THOC2Q8NI27 1593 aaKnown RBP25.41■■□□□ 1.66
FMR1-215ENST00000616382 KIF21AQ7Z4S6 1674 aa25.38■■□□□ 1.65
FMR1-215ENST00000616382 DNAJC5Q9H3Z4 198 aa25.34■■□□□ 1.65
FMR1-215ENST00000616382 CFTRP13569 1480 aa25.33■■□□□ 1.64
FMR1-215ENST00000616382 MRC2Q9UBG0 1479 aa25.28■■□□□ 1.64
FMR1-215ENST00000616382 CEP164Q9UPV0 1460 aa25.24■■□□□ 1.63
FMR1-215ENST00000616382 FANCD2Q9BXW9 1451 aa25.24■■□□□ 1.63
FMR1-215ENST00000616382 SUPT5HO00267 1087 aaKnown RBP25.19■■□□□ 1.62
FMR1-215ENST00000616382 WDR62O43379 1518 aa25.19■■□□□ 1.62
FMR1-215ENST00000616382 CCDC88BA6NC98 1476 aa25.18■■□□□ 1.62
FMR1-215ENST00000616382 PRDM2Q13029 1718 aa25.03■■□□□ 1.6
FMR1-215ENST00000616382 URB2Q14146 1524 aaKnown RBP24.96■■□□□ 1.59
FMR1-215ENST00000616382 ABCC8Q09428 1581 aa24.86■■□□□ 1.57
FMR1-215ENST00000616382 TOPBP1Q92547 1522 aa24.78■■□□□ 1.56
FMR1-215ENST00000616382 IFT140Q96RY7 1462 aa24.76■■□□□ 1.55
FMR1-215ENST00000616382 DNMBPQ6XZF7 1577 aa24.73■■□□□ 1.55
FMR1-215ENST00000616382 OSCARQ8IYS5 282 aa24.63■■□□□ 1.53
FMR1-215ENST00000616382 ZNF608Q9ULD9 1512 aaPredicted RBP24.59■■□□□ 1.53
FMR1-215ENST00000616382 POLA1P09884 1462 aaPredicted RBP24.55■■□□□ 1.52
FMR1-215ENST00000616382 TARBP1Q13395 1621 aaKnown RBP24.5■■□□□ 1.51
FMR1-215ENST00000616382 SOGA1O94964 1423 aa24.49■■□□□ 1.51
FMR1-215ENST00000616382 EIF4G3O43432 1585 aaKnown RBP24.47■■□□□ 1.51
FMR1-215ENST00000616382 AQRO60306 1485 aaKnown RBP eCLIP24.44■■□□□ 1.57e-6■■□□□ 12.2
FMR1-215ENST00000616382 FGD5Q6ZNL6 1462 aa24.43■■□□□ 1.5
FMR1-215ENST00000616382 CUX1P39880 1505 aa24.43■■□□□ 1.5
FMR1-215ENST00000616382 RAD54L2Q9Y4B4 1467 aa24.42■■□□□ 1.5
FMR1-215ENST00000616382 WDR97A6NE52 1622 aa24.39■■□□□ 1.5
FMR1-215ENST00000616382 TDRD9Q8NDG6 1382 aaKnown RBP24.36■■□□□ 1.49
FMR1-215ENST00000616382 TRIM41Q8WV44 630 aa24.31■■□□□ 1.48
FMR1-215ENST00000616382 FBLN2P98095 1184 aa24.28■■□□□ 1.48
FMR1-215ENST00000616382 GRIN2BQ13224 1484 aa24.24■■□□□ 1.47
FMR1-215ENST00000616382 WRNQ14191 1432 aaPredicted RBP eCLIP24.22■■□□□ 1.47
FMR1-215ENST00000616382 MAGI1Q96QZ7 1491 aaPredicted RBP24.22■■□□□ 1.47
FMR1-215ENST00000616382 ABCA10Q8WWZ4 1543 aa24.22■■□□□ 1.47
FMR1-215ENST00000616382 CHD1O14646 1710 aa24.2■■□□□ 1.46
FMR1-215ENST00000616382 SNAPC4Q5SXM2 1469 aa24.2■■□□□ 1.46
FMR1-215ENST00000616382 CHMP7Q8WUX9 453 aaPredicted RBP24.19■■□□□ 1.46
FMR1-215ENST00000616382 GAPVD1Q14C86 1478 aa24.18■■□□□ 1.46
FMR1-215ENST00000616382 TOP2BQ02880 1626 aa24.16■■□□□ 1.46
FMR1-215ENST00000616382 BIVM-ERCC5R4GMW8 1640 aa24.14■■□□□ 1.45
FMR1-215ENST00000616382 RIMBP3CA6NJZ7 1639 aa24.13■■□□□ 1.45
FMR1-215ENST00000616382 RIMBP3BA6NNM3 1639 aa24.13■■□□□ 1.45
FMR1-215ENST00000616382 RIMBP3Q9UFD9 1639 aa24.13■■□□□ 1.45
FMR1-215ENST00000616382 ARHGEF11O15085 1522 aa24.12■■□□□ 1.45
FMR1-215ENST00000616382 SYNJ2O15056 1496 aa24.12■■□□□ 1.45
FMR1-215ENST00000616382 ABCA5Q8WWZ7 1642 aa24.09■■□□□ 1.45
FMR1-215ENST00000616382 SYNJ1O43426 1573 aa24.09■■□□□ 1.45
FMR1-215ENST00000616382 PBRM1Q86U86 1689 aa24.07■■□□□ 1.44
FMR1-215ENST00000616382 CLASP1Q7Z460 1538 aa23.98■■□□□ 1.43
FMR1-215ENST00000616382 CYB5RLQ6IPT4 315 aa23.97■■□□□ 1.43
FMR1-215ENST00000616382 ERICH3Q5RHP9 1530 aa23.93■■□□□ 1.42
FMR1-215ENST00000616382 FHAD1B1AJZ9 1412 aa23.92■■□□□ 1.42
FMR1-215ENST00000616382 GRIN2AQ12879 1464 aa23.89■■□□□ 1.42
FMR1-215ENST00000616382 ARAP1Q96P48 1450 aa23.89■■□□□ 1.42
FMR1-215ENST00000616382 ADAMTS12P58397 1594 aa23.88■■□□□ 1.41
FMR1-215ENST00000616382 NUP160Q12769 1436 aa23.82■■□□□ 1.4
FMR1-215ENST00000616382 KIF27Q86VH2 1401 aa23.77■■□□□ 1.4
FMR1-215ENST00000616382 CEP170Q5SW79 1584 aa23.74■■□□□ 1.39
FMR1-215ENST00000616382 IGF1RP08069 1367 aa23.7■■□□□ 1.38
FMR1-215ENST00000616382 CHIC1Q5VXU3 224 aa23.64■■□□□ 1.38
FMR1-215ENST00000616382 SHROOM2Q13796 1616 aa23.63■■□□□ 1.37
FMR1-215ENST00000616382 TRHP20396 242 aaPredicted RBP23.62■■□□□ 1.37
FMR1-215ENST00000616382 JPH4Q96JJ6 628 aa23.62■■□□□ 1.37
FMR1-215ENST00000616382 CUL7Q14999 1698 aa23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms