Protein–RNA interactions for Protein: P78324

SIRPA, Tyrosine-protein phosphatase non-receptor type substrate 1, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPAP78324 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC20.28■□□□□ 0.84
SIRPAP78324 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SIRPAP78324 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC20.28■□□□□ 0.84
SIRPAP78324 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SIRPAP78324 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SIRPAP78324 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC20.28■□□□□ 0.84
SIRPAP78324 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SIRPAP78324 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SIRPAP78324 AC019069.1-201ENST00000610008 1333 ntBASIC20.27■□□□□ 0.84
SIRPAP78324 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
SIRPAP78324 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SIRPAP78324 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SIRPAP78324 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC20.27■□□□□ 0.84
SIRPAP78324 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SIRPAP78324 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC20.27■□□□□ 0.84
SIRPAP78324 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SIRPAP78324 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SIRPAP78324 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
SIRPAP78324 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC20.26■□□□□ 0.83
SIRPAP78324 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SIRPAP78324 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
SIRPAP78324 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
SIRPAP78324 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
SIRPAP78324 ANOS2P-203ENST00000472227 1816 ntBASIC20.26■□□□□ 0.83
SIRPAP78324 SRD5A1P1-201ENST00000442297 786 ntBASIC20.26■□□□□ 0.83
SIRPAP78324 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC20.26■□□□□ 0.83
SIRPAP78324 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC20.26■□□□□ 0.83
SIRPAP78324 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
SIRPAP78324 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SIRPAP78324 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SIRPAP78324 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SIRPAP78324 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.26■□□□□ 0.83
SIRPAP78324 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.26■□□□□ 0.83
SIRPAP78324 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC20.26■□□□□ 0.83
SIRPAP78324 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
SIRPAP78324 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SIRPAP78324 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
SIRPAP78324 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
SIRPAP78324 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
SIRPAP78324 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SIRPAP78324 AL139246.5-201ENST00000606645 996 ntBASIC20.25■□□□□ 0.83
SIRPAP78324 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
SIRPAP78324 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
SIRPAP78324 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SIRPAP78324 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC20.25■□□□□ 0.83
SIRPAP78324 CD37-213ENST00000598095 1598 ntTSL 2 BASIC20.25■□□□□ 0.83
SIRPAP78324 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
SIRPAP78324 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.24■□□□□ 0.83
SIRPAP78324 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SIRPAP78324 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SIRPAP78324 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC20.24■□□□□ 0.83
SIRPAP78324 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SIRPAP78324 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC20.24■□□□□ 0.83
SIRPAP78324 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SIRPAP78324 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SIRPAP78324 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SIRPAP78324 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SIRPAP78324 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SIRPAP78324 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SIRPAP78324 AC110285.6-201ENST00000617652 491 ntBASIC20.23■□□□□ 0.83
SIRPAP78324 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SIRPAP78324 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SIRPAP78324 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
SIRPAP78324 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SIRPAP78324 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SIRPAP78324 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC20.22■□□□□ 0.83
SIRPAP78324 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.22■□□□□ 0.83
SIRPAP78324 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.22■□□□□ 0.83
SIRPAP78324 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SIRPAP78324 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SIRPAP78324 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SIRPAP78324 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SIRPAP78324 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SIRPAP78324 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC20.22■□□□□ 0.83
SIRPAP78324 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC20.22■□□□□ 0.83
SIRPAP78324 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SIRPAP78324 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC20.22■□□□□ 0.83
SIRPAP78324 AC233723.2-201ENST00000623798 2106 ntBASIC20.22■□□□□ 0.83
SIRPAP78324 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
SIRPAP78324 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
SIRPAP78324 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
SIRPAP78324 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
SIRPAP78324 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SIRPAP78324 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.22■□□□□ 0.83
SIRPAP78324 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SIRPAP78324 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
SIRPAP78324 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SIRPAP78324 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
SIRPAP78324 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SIRPAP78324 AL161729.1-201ENST00000604104 1402 ntBASIC20.21■□□□□ 0.83
SIRPAP78324 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC20.21■□□□□ 0.83
SIRPAP78324 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
SIRPAP78324 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC20.21■□□□□ 0.83
SIRPAP78324 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
SIRPAP78324 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SIRPAP78324 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
SIRPAP78324 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SIRPAP78324 AC092068.2-201ENST00000590491 1708 ntBASIC20.21■□□□□ 0.83
SIRPAP78324 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
SIRPAP78324 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms