RNA–Protein interactions for RNA: ENST00000440869.6

PHACTR2-208, Transcript of phosphatase and actin regulator 2, human

APPRIS ALT2 TSL 2 BASIC

Gene PHACTR2, Length 2,569 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHACTR2-208	ENST00000440869	NISCH	Q9Y2I1	1504 aa		44.42	■■■■■ 4.7
PHACTR2-208	ENST00000440869	SHROOM4	Q9ULL8	1493 aa		38.53	■■■■□ 3.76
PHACTR2-208	ENST00000440869	SUPT5H	O00267	1087 aa	Known RBP	37.95	■■■■□ 3.67
PHACTR2-208	ENST00000440869	ZCCHC6	Q5VYS8	1495 aa	Known RBP	37.63	■■■■□ 3.61
PHACTR2-208	ENST00000440869	CCDC180	Q9P1Z9	1646 aa		37.42	■■■■□ 3.58
PHACTR2-208	ENST00000440869	DCAF8L2	P0C7V8	631 aa		37.11	■■■■□ 3.53
PHACTR2-208	ENST00000440869	MYO15B	Q96JP2	1530 aa		36.98	■■■■□ 3.51
PHACTR2-208	ENST00000440869	CHIC1	Q5VXU3	224 aa		36.96	■■■■□ 3.51
PHACTR2-208	ENST00000440869	HRC	P23327	699 aa		36.51	■■■■□ 3.43
PHACTR2-208	ENST00000440869	PCGF6	Q9BYE7	350 aa		36.35	■■■■□ 3.41
PHACTR2-208	ENST00000440869	DCAF1	Q9Y4B6	1507 aa		36.26	■■■■□ 3.39
PHACTR2-208	ENST00000440869	LOC105371045	A0A1W2PR82	267 aa		36.05	■■■■□ 3.36
PHACTR2-208	ENST00000440869	PPARGC1B	Q86YN6	1023 aa	Known RBP	35.9	■■■■□ 3.34
PHACTR2-208	ENST00000440869	ABCC9	O60706	1549 aa		35.58	■■■■□ 3.29
PHACTR2-208	ENST00000440869	SCRIB	Q14160	1630 aa		35.43	■■■■□ 3.26
PHACTR2-208	ENST00000440869	TRIM26	Q12899	539 aa	Predicted RBP	35.41	■■■■□ 3.26
PHACTR2-208	ENST00000440869	RSF1	Q96T23	1441 aa	Predicted RBP	35.38	■■■■□ 3.26
PHACTR2-208	ENST00000440869	TRIM41	Q8WV44	630 aa		35.2	■■■■□ 3.23
PHACTR2-208	ENST00000440869	RB1CC1	Q8TDY2	1594 aa		35.12	■■■■□ 3.21
PHACTR2-208	ENST00000440869	FAM9A	Q8IZU1	332 aa	Predicted RBP	35.12	■■■■□ 3.21
PHACTR2-208	ENST00000440869	EHMT2	Q96KQ7	1210 aa		34.96	■■■■□ 3.19
PHACTR2-208	ENST00000440869	CECR2	Q9BXF3	1484 aa		34.78	■■■■□ 3.16
PHACTR2-208	ENST00000440869	ZEB1	P37275	1124 aa	Predicted RBP	34.7	■■■■□ 3.15
PHACTR2-208	ENST00000440869	MROH2B	Q7Z745	1585 aa		34.65	■■■■□ 3.14
PHACTR2-208	ENST00000440869	NACAD	O15069	1562 aa		34.55	■■■■□ 3.12
PHACTR2-208	ENST00000440869	WIZ	O95785	1651 aa		34.52	■■■■□ 3.12
PHACTR2-208	ENST00000440869	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	34.19	■■■■□ 3.06
PHACTR2-208	ENST00000440869	EIF4G1	Q04637	1599 aa	Known RBP	34.08	■■■■□ 3.05
PHACTR2-208	ENST00000440869	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	34.08	■■■■□ 3.05
PHACTR2-208	ENST00000440869	SCAF1	Q9H7N4	1312 aa	Known RBP	33.98	■■■■□ 3.03
PHACTR2-208	ENST00000440869	CCER1	Q8TC90	406 aa	Predicted RBP	33.95	■■■■□ 3.02
PHACTR2-208	ENST00000440869	ABCC8	Q09428	1581 aa		33.95	■■■■□ 3.02
PHACTR2-208	ENST00000440869	TTBK1	Q5TCY1	1321 aa	Predicted RBP	33.91	■■■■□ 3.02
PHACTR2-208	ENST00000440869	CCDC88B	A6NC98	1476 aa		33.88	■■■■□ 3.01
PHACTR2-208	ENST00000440869	TOP2A	P11388	1531 aa	Known RBP	33.83	■■■■□ 3.01
PHACTR2-208	ENST00000440869	SMARCA4	P51532	1647 aa		33.75	■■■□□ 2.99
PHACTR2-208	ENST00000440869	SMARCA2	P51531	1590 aa		33.72	■■■□□ 2.99
PHACTR2-208	ENST00000440869	SOGA1	O94964	1423 aa		33.71	■■■□□ 2.99
PHACTR2-208	ENST00000440869	CEP162	Q5TB80	1403 aa		33.68	■■■□□ 2.98
PHACTR2-208	ENST00000440869	WRN	Q14191	1432 aa	Predicted RBP eCLIP	33.63	■■■□□ 2.97
PHACTR2-208	ENST00000440869	UNC13A	Q9UPW8	1703 aa		33.56	■■■□□ 2.96
PHACTR2-208	ENST00000440869	RUSC2	Q8N2Y8	1516 aa		33.56	■■■□□ 2.96
PHACTR2-208	ENST00000440869	TNIK	Q9UKE5	1360 aa		33.53	■■■□□ 2.96
PHACTR2-208	ENST00000440869	UBTF	P17480	764 aa	Known RBP	33.52	■■■□□ 2.96
PHACTR2-208	ENST00000440869	CSRNP3	Q8WYN3	585 aa		33.51	■■■□□ 2.95
PHACTR2-208	ENST00000440869	DIEXF	Q68CQ4	756 aa	Known RBP	33.48	■■■□□ 2.95
PHACTR2-208	ENST00000440869	PELP1	Q8IZL8	1130 aa	Known RBP	33.48	■■■□□ 2.95
PHACTR2-208	ENST00000440869	NEUROD1	Q13562	356 aa		33.45	■■■□□ 2.95
PHACTR2-208	ENST00000440869	ACIN1	Q9UKV3	1341 aa	Known RBP	33.45	■■■□□ 2.94
PHACTR2-208	ENST00000440869	EEA1	Q15075	1411 aa		33.36	■■■□□ 2.93
PHACTR2-208	ENST00000440869	PABPN1	Q86U42	306 aa	Known RBP eCLIP	33.35	■■■□□ 2.93
PHACTR2-208	ENST00000440869	GOLGA3	Q08378	1498 aa		33.26	■■■□□ 2.91
PHACTR2-208	ENST00000440869	GTF3C3	Q9Y5Q9	886 aa		33.15	■■■□□ 2.9
PHACTR2-208	ENST00000440869	CENPB	P07199	599 aa	Predicted RBP	33.14	■■■□□ 2.89
PHACTR2-208	ENST00000440869	BICRA	Q9NZM4	1560 aa		33.09	■■■□□ 2.89
PHACTR2-208	ENST00000440869	HNRNPUL2	Q1KMD3	747 aa	Known RBP	33.09	■■■□□ 2.89
PHACTR2-208	ENST00000440869	ZNF316	A6NFI3	1004 aa	Predicted RBP	33.08	■■■□□ 2.89
PHACTR2-208	ENST00000440869	SYNJ1	O43426	1573 aa		33.07	■■■□□ 2.88
PHACTR2-208	ENST00000440869	CEP164	Q9UPV0	1460 aa		33.01	■■■□□ 2.88
PHACTR2-208	ENST00000440869	CLIP1	P30622	1438 aa		32.97	■■■□□ 2.87
PHACTR2-208	ENST00000440869	PEG3	Q9GZU2	1588 aa		32.96	■■■□□ 2.87
PHACTR2-208	ENST00000440869	RANGAP1	P46060	587 aa	Predicted RBP	32.95	■■■□□ 2.86
PHACTR2-208	ENST00000440869	KIF21B	O75037	1637 aa		32.93	■■■□□ 2.86
PHACTR2-208	ENST00000440869	YTHDC1	Q96MU7	727 aa	Known RBP	32.87	■■■□□ 2.85
PHACTR2-208	ENST00000440869	RAPGEF2	Q9Y4G8	1499 aa		32.83	■■■□□ 2.85
PHACTR2-208	ENST00000440869	VPS8	Q8N3P4	1428 aa		32.83	■■■□□ 2.85
PHACTR2-208	ENST00000440869	ATAD2B	Q9ULI0	1458 aa		32.81	■■■□□ 2.84
PHACTR2-208	ENST00000440869	APLP2	Q06481	763 aa		32.79	■■■□□ 2.84
PHACTR2-208	ENST00000440869	MIER1	Q8N108	512 aa		32.76	■■■□□ 2.84
PHACTR2-208	ENST00000440869	BAZ1B	Q9UIG0	1483 aa	Known RBP	32.76	■■■□□ 2.83
PHACTR2-208	ENST00000440869	TOP2B	Q02880	1626 aa		32.53	■■■□□ 2.8
PHACTR2-208	ENST00000440869	KANK4	Q5T7N3	995 aa	Predicted RBP	32.4	■■■□□ 2.78
PHACTR2-208	ENST00000440869	ARAP1	Q96P48	1450 aa		32.37	■■■□□ 2.77
PHACTR2-208	ENST00000440869	BIVM-ERCC5	R4GMW8	1640 aa		32.37	■■■□□ 2.77
PHACTR2-208	ENST00000440869	PRX	Q9BXM0	1461 aa		32.35	■■■□□ 2.77
PHACTR2-208	ENST00000440869	DHX57	Q6P158	1386 aa	Known RBP	32.34	■■■□□ 2.77
PHACTR2-208	ENST00000440869	ERICH3	Q5RHP9	1530 aa		32.31	■■■□□ 2.76
PHACTR2-208	ENST00000440869	CLSPN	Q9HAW4	1339 aa		32.21	■■■□□ 2.75
PHACTR2-208	ENST00000440869	CUX1	P39880	1505 aa		32.21	■■■□□ 2.75
PHACTR2-208	ENST00000440869	KIF27	Q86VH2	1401 aa		32.13	■■■□□ 2.73
PHACTR2-208	ENST00000440869	ITGAE	P38570	1179 aa		32.11	■■■□□ 2.73
PHACTR2-208	ENST00000440869	RRBP1	Q9P2E9	1410 aa	Known RBP	32.09	■■■□□ 2.73
PHACTR2-208	ENST00000440869	ARHGAP35	Q9NRY4	1499 aa		32.03	■■■□□ 2.72
PHACTR2-208	ENST00000440869	NCAPD3	P42695	1498 aa		32.02	■■■□□ 2.72
PHACTR2-208	ENST00000440869	CCNB3	Q8WWL7	1395 aa		32.01	■■■□□ 2.71
PHACTR2-208	ENST00000440869	HMGXB3	Q12766	1538 aa		32	■■■□□ 2.71
PHACTR2-208	ENST00000440869	CFTR	P13569	1480 aa		31.93	■■■□□ 2.7
PHACTR2-208	ENST00000440869	CUX2	O14529	1486 aa		31.9	■■■□□ 2.7
PHACTR2-208	ENST00000440869	RAB3GAP2	Q9H2M9	1393 aa		31.82	■■■□□ 2.68
PHACTR2-208	ENST00000440869	SUPT16H	Q9Y5B9	1047 aa	Known RBP	31.8	■■■□□ 2.68
PHACTR2-208	ENST00000440869	IGF1R	P08069	1367 aa		31.79	■■■□□ 2.68
PHACTR2-208	ENST00000440869	MYT1	Q01538	1121 aa		31.78	■■■□□ 2.68
PHACTR2-208	ENST00000440869	KCNH8	Q96L42	1107 aa		31.72	■■■□□ 2.67
PHACTR2-208	ENST00000440869	MAPKBP1	O60336	1514 aa		31.72	■■■□□ 2.67
PHACTR2-208	ENST00000440869	TIAM1	Q13009	1591 aa		31.71	■■■□□ 2.67
PHACTR2-208	ENST00000440869	CARMIL1	Q5VZK9	1371 aa		31.67	■■■□□ 2.66
PHACTR2-208	ENST00000440869	P3H3	Q8IVL6	736 aa		31.64	■■■□□ 2.66
PHACTR2-208	ENST00000440869	FAM50A	Q14320	339 aa	Known RBP	31.64	■■■□□ 2.66
PHACTR2-208	ENST00000440869	PHLDB1	Q86UU1	1377 aa		31.64	■■■□□ 2.66
PHACTR2-208	ENST00000440869	SIN3A	Q96ST3	1273 aa		31.62	■■■□□ 2.65

Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms