RNA–Protein interactions for RNA: ENST00000616640.1

RPP38-207, Transcript of ribonuclease P/MRP subunit p38, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RPP38, Length 1,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP38-207ENST00000616640 NISCHQ9Y2I1 1504 aa54.33■■■■■ 6.29
RPP38-207ENST00000616640 CCDC180Q9P1Z9 1646 aa48.2■■■■■ 5.31
RPP38-207ENST00000616640 ABCC9O60706 1549 aa46.63■■■■■ 5.06
RPP38-207ENST00000616640 ZCCHC6Q5VYS8 1495 aaKnown RBP45.36■■■■■ 4.85
RPP38-207ENST00000616640 DCAF8L2P0C7V8 631 aa45.24■■■■■ 4.83
RPP38-207ENST00000616640 NACADO15069 1562 aa45.14■■■■■ 4.82
RPP38-207ENST00000616640 RB1CC1Q8TDY2 1594 aa45.11■■■■■ 4.81
RPP38-207ENST00000616640 MYO15BQ96JP2 1530 aa44.96■■■■■ 4.79
RPP38-207ENST00000616640 DCAF1Q9Y4B6 1507 aa44.95■■■■■ 4.79
RPP38-207ENST00000616640 UNC13AQ9UPW8 1703 aa44.22■■■■■ 4.67
RPP38-207ENST00000616640 SCRIBQ14160 1630 aa44■■■■■ 4.63
RPP38-207ENST00000616640 BICRAQ9NZM4 1560 aa43.67■■■■■ 4.58
RPP38-207ENST00000616640 PABPN1Q86U42 306 aaKnown RBP eCLIP43.61■■■■■ 4.57
RPP38-207ENST00000616640 SHROOM4Q9ULL8 1493 aa43.25■■■■■ 4.51
RPP38-207ENST00000616640 EIF4G1Q04637 1599 aaKnown RBP42.51■■■■■ 4.4
RPP38-207ENST00000616640 DNAJC5BQ9UF47 199 aa42.26■■■■■ 4.36
RPP38-207ENST00000616640 CECR2Q9BXF3 1484 aa42.25■■■■■ 4.35
RPP38-207ENST00000616640 CC2D2AQ9P2K1 1620 aa42.25■■■■■ 4.35
RPP38-207ENST00000616640 BAZ1AQ9NRL2 1556 aaPredicted RBP42.12■■■■■ 4.33
RPP38-207ENST00000616640 SMARCA4P51532 1647 aa42.11■■■■■ 4.33
RPP38-207ENST00000616640 MROH2BQ7Z745 1585 aa41.88■■■■■ 4.3
RPP38-207ENST00000616640 SMARCA2P51531 1590 aa41.73■■■■■ 4.27
RPP38-207ENST00000616640 ATAD2BQ9ULI0 1458 aa41.69■■■■■ 4.26
RPP38-207ENST00000616640 PEG3Q9GZU2 1588 aa41.64■■■■■ 4.26
RPP38-207ENST00000616640 NCAPD3P42695 1498 aa41.57■■■■■ 4.25
RPP38-207ENST00000616640 RSF1Q96T23 1441 aaPredicted RBP41.53■■■■■ 4.24
RPP38-207ENST00000616640 WIZO95785 1651 aa41.53■■■■■ 4.24
RPP38-207ENST00000616640 HMGXB3Q12766 1538 aa41.49■■■■■ 4.23
RPP38-207ENST00000616640 BAZ1BQ9UIG0 1483 aaKnown RBP41.43■■■■■ 4.22
RPP38-207ENST00000616640 TOP2AP11388 1531 aaKnown RBP41.07■■■■■ 4.16
RPP38-207ENST00000616640 SUPT5HO00267 1087 aaKnown RBP40.89■■■■■ 4.14
RPP38-207ENST00000616640 CCDC88BA6NC98 1476 aa40.54■■■■■ 4.08
RPP38-207ENST00000616640 LAMC3Q9Y6N6 1575 aa40.5■■■■■ 4.07
RPP38-207ENST00000616640 NESP48681 1621 aa40.48■■■■■ 4.07
RPP38-207ENST00000616640 CADPSQ9ULU8 1353 aa40.4■■■■■ 4.06
RPP38-207ENST00000616640 CFTRP13569 1480 aa40.27■■■■■ 4.04
RPP38-207ENST00000616640 PRDM2Q13029 1718 aa40.23■■■■■ 4.03
RPP38-207ENST00000616640 ERCC6Q03468 1493 aa40.2■■■■■ 4.03
RPP38-207ENST00000616640 PDS5BQ9NTI5 1447 aa40.16■■■■■ 4.02
RPP38-207ENST00000616640 KIF21AQ7Z4S6 1674 aa40.14■■■■■ 4.02
RPP38-207ENST00000616640 FANCD2Q9BXW9 1451 aa39.98■■■■□ 3.99
RPP38-207ENST00000616640 CEP164Q9UPV0 1460 aa39.91■■■■□ 3.98
RPP38-207ENST00000616640 THOC2Q8NI27 1593 aaKnown RBP39.82■■■■□ 3.96
RPP38-207ENST00000616640 MRC2Q9UBG0 1479 aa39.73■■■■□ 3.95
RPP38-207ENST00000616640 WDR62O43379 1518 aa39.59■■■■□ 3.93
RPP38-207ENST00000616640 CUX2O14529 1486 aa39.55■■■■□ 3.92
RPP38-207ENST00000616640 URB2Q14146 1524 aaKnown RBP39.54■■■■□ 3.92
RPP38-207ENST00000616640 ABCC8Q09428 1581 aa39.43■■■■□ 3.9
RPP38-207ENST00000616640 DNMBPQ6XZF7 1577 aa39.42■■■■□ 3.9
RPP38-207ENST00000616640 TOPBP1Q92547 1522 aa39.4■■■■□ 3.9
RPP38-207ENST00000616640 CUX1P39880 1505 aa39.27■■■■□ 3.88
RPP38-207ENST00000616640 WRNQ14191 1432 aaPredicted RBP eCLIP39.19■■■■□ 3.86
RPP38-207ENST00000616640 BIVM-ERCC5R4GMW8 1640 aa39.12■■■■□ 3.85
RPP38-207ENST00000616640 SYNJ1O43426 1573 aa39.11■■■■□ 3.85
RPP38-207ENST00000616640 TOP2BQ02880 1626 aa39.1■■■■□ 3.85
RPP38-207ENST00000616640 POLA1P09884 1462 aaPredicted RBP39.08■■■■□ 3.85
RPP38-207ENST00000616640 FGD5Q6ZNL6 1462 aa39.08■■■■□ 3.85
RPP38-207ENST00000616640 IFT140Q96RY7 1462 aa39.02■■■■□ 3.84
RPP38-207ENST00000616640 TARBP1Q13395 1621 aaKnown RBP38.95■■■■□ 3.83
RPP38-207ENST00000616640 SOGA1O94964 1423 aa38.92■■■■□ 3.82
RPP38-207ENST00000616640 RAD54L2Q9Y4B4 1467 aa38.9■■■■□ 3.82
RPP38-207ENST00000616640 WDR97A6NE52 1622 aa38.81■■■■□ 3.8
RPP38-207ENST00000616640 ZNF608Q9ULD9 1512 aaPredicted RBP38.79■■■■□ 3.8
RPP38-207ENST00000616640 EIF4G3O43432 1585 aaKnown RBP38.75■■■■□ 3.79
RPP38-207ENST00000616640 ABCA10Q8WWZ4 1543 aa38.7■■■■□ 3.79
RPP38-207ENST00000616640 AQRO60306 1485 aaKnown RBP eCLIP38.64■■■■□ 3.78
RPP38-207ENST00000616640 TDRD9Q8NDG6 1382 aaKnown RBP38.63■■■■□ 3.77
RPP38-207ENST00000616640 TRIM41Q8WV44 630 aa38.6■■■■□ 3.77
RPP38-207ENST00000616640 ABCA5Q8WWZ7 1642 aa38.56■■■■□ 3.76
RPP38-207ENST00000616640 PBRM1Q86U86 1689 aa38.52■■■■□ 3.76
RPP38-207ENST00000616640 GAPVD1Q14C86 1478 aa38.51■■■■□ 3.75
RPP38-207ENST00000616640 GRIN2BQ13224 1484 aa38.43■■■■□ 3.74
RPP38-207ENST00000616640 CHIC1Q5VXU3 224 aa38.38■■■■□ 3.73
RPP38-207ENST00000616640 KIF27Q86VH2 1401 aa38.34■■■■□ 3.73
RPP38-207ENST00000616640 SNAPC4Q5SXM2 1469 aa38.32■■■■□ 3.73
RPP38-207ENST00000616640 MAGI1Q96QZ7 1491 aaPredicted RBP38.29■■■■□ 3.72
RPP38-207ENST00000616640 ERICH3Q5RHP9 1530 aa38.27■■■■□ 3.72
RPP38-207ENST00000616640 CHD1O14646 1710 aa38.24■■■■□ 3.71
RPP38-207ENST00000616640 ADAMTS12P58397 1594 aa38.16■■■■□ 3.7
RPP38-207ENST00000616640 FBLN2P98095 1184 aa38.13■■■■□ 3.69
RPP38-207ENST00000616640 SYNJ2O15056 1496 aa38.12■■■■□ 3.69
RPP38-207ENST00000616640 RUSC2Q8N2Y8 1516 aa38.12■■■■□ 3.69
RPP38-207ENST00000616640 CUL7Q14999 1698 aa38.09■■■■□ 3.69
RPP38-207ENST00000616640 CHMP7Q8WUX9 453 aaPredicted RBP38.07■■■■□ 3.69
RPP38-207ENST00000616640 IGF1RP08069 1367 aa38.06■■■■□ 3.68
RPP38-207ENST00000616640 FHAD1B1AJZ9 1412 aa38.05■■■■□ 3.68
RPP38-207ENST00000616640 OSCARQ8IYS5 282 aa37.97■■■■□ 3.67
RPP38-207ENST00000616640 GRIN2AQ12879 1464 aa37.94■■■■□ 3.66
RPP38-207ENST00000616640 EEA1Q15075 1411 aa37.91■■■■□ 3.66
RPP38-207ENST00000616640 CARMIL1Q5VZK9 1371 aa37.89■■■■□ 3.66
RPP38-207ENST00000616640 FAM9AQ8IZU1 332 aaPredicted RBP37.8■■■■□ 3.64
RPP38-207ENST00000616640 CSRNP3Q8WYN3 585 aa37.77■■■■□ 3.64
RPP38-207ENST00000616640 CEP170Q5SW79 1584 aa37.75■■■■□ 3.63
RPP38-207ENST00000616640 RAPGEF2Q9Y4G8 1499 aa37.75■■■■□ 3.63
RPP38-207ENST00000616640 DNAJC5Q9H3Z4 198 aa37.71■■■■□ 3.63
RPP38-207ENST00000616640 NUP160Q12769 1436 aa37.71■■■■□ 3.63
RPP38-207ENST00000616640 CLASP1Q7Z460 1538 aa37.7■■■■□ 3.63
RPP38-207ENST00000616640 PRXQ9BXM0 1461 aa37.68■■■■□ 3.62
RPP38-207ENST00000616640 KIF21BO75037 1637 aa37.54■■■■□ 3.6
RPP38-207ENST00000616640 CTTNBP2Q8WZ74 1663 aa37.52■■■■□ 3.6
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms