RNA–Protein interactions for RNA: ENST00000299295.6

CHODL-201, Transcript of chondrolectin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHODL, Length 2,548 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHODL-201ENST00000299295 NISCHQ9Y2I1 1504 aa44.54■■■■■ 4.72
CHODL-201ENST00000299295 SHROOM4Q9ULL8 1493 aa38.67■■■■□ 3.78
CHODL-201ENST00000299295 CCDC180Q9P1Z9 1646 aa38.4■■■■□ 3.74
CHODL-201ENST00000299295 SUPT5HO00267 1087 aaKnown RBP38.1■■■■□ 3.69
CHODL-201ENST00000299295 ZCCHC6Q5VYS8 1495 aaKnown RBP37.59■■■■□ 3.61
CHODL-201ENST00000299295 DCAF8L2P0C7V8 631 aa37.24■■■■□ 3.55
CHODL-201ENST00000299295 MYO15BQ96JP2 1530 aa37.1■■■■□ 3.53
CHODL-201ENST00000299295 CHIC1Q5VXU3 224 aa37.07■■■■□ 3.52
CHODL-201ENST00000299295 HRCP23327 699 aa36.63■■■■□ 3.45
CHODL-201ENST00000299295 DCAF1Q9Y4B6 1507 aa36.62■■■■□ 3.45
CHODL-201ENST00000299295 PCGF6Q9BYE7 350 aa36.52■■■■□ 3.44
CHODL-201ENST00000299295 ABCC9O60706 1549 aa36.35■■■■□ 3.41
CHODL-201ENST00000299295 LOC105371045A0A1W2PR82 267 aa36.21■■■■□ 3.39
CHODL-201ENST00000299295 PPARGC1BQ86YN6 1023 aaKnown RBP36.12■■■■□ 3.37
CHODL-201ENST00000299295 NACADO15069 1562 aa35.74■■■■□ 3.31
CHODL-201ENST00000299295 SCRIBQ14160 1630 aa35.72■■■■□ 3.31
CHODL-201ENST00000299295 TRIM26Q12899 539 aaPredicted RBP35.49■■■■□ 3.27
CHODL-201ENST00000299295 RSF1Q96T23 1441 aaPredicted RBP35.41■■■■□ 3.26
CHODL-201ENST00000299295 RB1CC1Q8TDY2 1594 aa35.37■■■■□ 3.25
CHODL-201ENST00000299295 TRIM41Q8WV44 630 aa35.28■■■■□ 3.24
CHODL-201ENST00000299295 FAM9AQ8IZU1 332 aaPredicted RBP35.27■■■■□ 3.24
CHODL-201ENST00000299295 EHMT2Q96KQ7 1210 aa35.17■■■■□ 3.22
CHODL-201ENST00000299295 CECR2Q9BXF3 1484 aa34.83■■■■□ 3.17
CHODL-201ENST00000299295 UNC13AQ9UPW8 1703 aa34.75■■■■□ 3.15
CHODL-201ENST00000299295 ZEB1P37275 1124 aaPredicted RBP34.73■■■■□ 3.15
CHODL-201ENST00000299295 MROH2BQ7Z745 1585 aa34.67■■■■□ 3.14
CHODL-201ENST00000299295 PABPN1Q86U42 306 aaKnown RBP eCLIP34.52■■■■□ 3.12
CHODL-201ENST00000299295 WIZO95785 1651 aa34.5■■■■□ 3.11
CHODL-201ENST00000299295 BICRAQ9NZM4 1560 aa34.39■■■■□ 3.1
CHODL-201ENST00000299295 BAZ1AQ9NRL2 1556 aaPredicted RBP34.31■■■■□ 3.08
CHODL-201ENST00000299295 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.24■■■■□ 3.07
CHODL-201ENST00000299295 SCAF1Q9H7N4 1312 aaKnown RBP34.15■■■■□ 3.06
CHODL-201ENST00000299295 SMARCA4P51532 1647 aa34.13■■■■□ 3.05
CHODL-201ENST00000299295 TTBK1Q5TCY1 1321 aaPredicted RBP34.1■■■■□ 3.05
CHODL-201ENST00000299295 CCER1Q8TC90 406 aaPredicted RBP34.05■■■■□ 3.04
CHODL-201ENST00000299295 EIF4G1Q04637 1599 aaKnown RBP34.05■■■■□ 3.04
CHODL-201ENST00000299295 ABCC8Q09428 1581 aa33.99■■■■□ 3.03
CHODL-201ENST00000299295 CCDC88BA6NC98 1476 aa33.94■■■■□ 3.02
CHODL-201ENST00000299295 TOP2AP11388 1531 aaKnown RBP33.79■■■■□ 3
CHODL-201ENST00000299295 SOGA1O94964 1423 aa33.79■■■■□ 3
CHODL-201ENST00000299295 CEP162Q5TB80 1403 aa33.73■■■□□ 2.99
CHODL-201ENST00000299295 SMARCA2P51531 1590 aa33.69■■■□□ 2.98
CHODL-201ENST00000299295 RUSC2Q8N2Y8 1516 aa33.64■■■□□ 2.98
CHODL-201ENST00000299295 WRNQ14191 1432 aaPredicted RBP eCLIP33.63■■■□□ 2.97
CHODL-201ENST00000299295 NEUROD1Q13562 356 aa33.61■■■□□ 2.97
CHODL-201ENST00000299295 UBTFP17480 764 aaKnown RBP33.6■■■□□ 2.97
CHODL-201ENST00000299295 DIEXFQ68CQ4 756 aaKnown RBP33.59■■■□□ 2.97
CHODL-201ENST00000299295 PEG3Q9GZU2 1588 aa33.57■■■□□ 2.96
CHODL-201ENST00000299295 ACIN1Q9UKV3 1341 aaKnown RBP33.57■■■□□ 2.96
CHODL-201ENST00000299295 CSRNP3Q8WYN3 585 aa33.55■■■□□ 2.96
CHODL-201ENST00000299295 TNIKQ9UKE5 1360 aa33.54■■■□□ 2.96
CHODL-201ENST00000299295 PELP1Q8IZL8 1130 aaKnown RBP33.52■■■□□ 2.96
CHODL-201ENST00000299295 ATAD2BQ9ULI0 1458 aa33.51■■■□□ 2.95
CHODL-201ENST00000299295 BAZ1BQ9UIG0 1483 aaKnown RBP33.36■■■□□ 2.93
CHODL-201ENST00000299295 EEA1Q15075 1411 aa33.3■■■□□ 2.92
CHODL-201ENST00000299295 GTF3C3Q9Y5Q9 886 aa33.3■■■□□ 2.92
CHODL-201ENST00000299295 GOLGA3Q08378 1498 aa33.26■■■□□ 2.91
CHODL-201ENST00000299295 HNRNPUL2Q1KMD3 747 aaKnown RBP33.21■■■□□ 2.91
CHODL-201ENST00000299295 CENPBP07199 599 aaPredicted RBP33.2■■■□□ 2.91
CHODL-201ENST00000299295 ZNF316A6NFI3 1004 aaPredicted RBP33.17■■■□□ 2.9
CHODL-201ENST00000299295 RANGAP1P46060 587 aaPredicted RBP33.11■■■□□ 2.89
CHODL-201ENST00000299295 NCAPD3P42695 1498 aa33.07■■■□□ 2.88
CHODL-201ENST00000299295 SYNJ1O43426 1573 aa33.07■■■□□ 2.88
CHODL-201ENST00000299295 YTHDC1Q96MU7 727 aaKnown RBP33.04■■■□□ 2.88
CHODL-201ENST00000299295 CEP164Q9UPV0 1460 aa33■■■□□ 2.87
CHODL-201ENST00000299295 CLIP1P30622 1438 aa32.99■■■□□ 2.87
CHODL-201ENST00000299295 HMGXB3Q12766 1538 aa32.98■■■□□ 2.87
CHODL-201ENST00000299295 MIER1Q8N108 512 aa32.89■■■□□ 2.86
CHODL-201ENST00000299295 RAPGEF2Q9Y4G8 1499 aa32.88■■■□□ 2.85
CHODL-201ENST00000299295 KIF21BO75037 1637 aa32.87■■■□□ 2.85
CHODL-201ENST00000299295 VPS8Q8N3P4 1428 aa32.84■■■□□ 2.85
CHODL-201ENST00000299295 APLP2Q06481 763 aa32.83■■■□□ 2.85
CHODL-201ENST00000299295 CC2D2AQ9P2K1 1620 aa32.76■■■□□ 2.83
CHODL-201ENST00000299295 CFTRP13569 1480 aa32.5■■■□□ 2.79
CHODL-201ENST00000299295 KANK4Q5T7N3 995 aaPredicted RBP32.5■■■□□ 2.79
CHODL-201ENST00000299295 TOP2BQ02880 1626 aa32.48■■■□□ 2.79
CHODL-201ENST00000299295 DHX57Q6P158 1386 aaKnown RBP32.41■■■□□ 2.78
CHODL-201ENST00000299295 ARAP1Q96P48 1450 aa32.4■■■□□ 2.78
CHODL-201ENST00000299295 PRXQ9BXM0 1461 aa32.35■■■□□ 2.77
CHODL-201ENST00000299295 CADPSQ9ULU8 1353 aa32.35■■■□□ 2.77
CHODL-201ENST00000299295 BIVM-ERCC5R4GMW8 1640 aa32.29■■■□□ 2.76
CHODL-201ENST00000299295 ERICH3Q5RHP9 1530 aa32.25■■■□□ 2.75
CHODL-201ENST00000299295 ITGAEP38570 1179 aa32.24■■■□□ 2.75
CHODL-201ENST00000299295 CUX1P39880 1505 aa32.23■■■□□ 2.75
CHODL-201ENST00000299295 CLSPNQ9HAW4 1339 aa32.2■■■□□ 2.74
CHODL-201ENST00000299295 PRDM2Q13029 1718 aa32.17■■■□□ 2.74
CHODL-201ENST00000299295 DNAJC5BQ9UF47 199 aa32.16■■■□□ 2.74
CHODL-201ENST00000299295 KIF27Q86VH2 1401 aa32.11■■■□□ 2.73
CHODL-201ENST00000299295 RRBP1Q9P2E9 1410 aaKnown RBP32.1■■■□□ 2.73
CHODL-201ENST00000299295 NESP48681 1621 aa32.07■■■□□ 2.72
CHODL-201ENST00000299295 ARHGAP35Q9NRY4 1499 aa32.05■■■□□ 2.72
CHODL-201ENST00000299295 CCNB3Q8WWL7 1395 aa32.04■■■□□ 2.72
CHODL-201ENST00000299295 FANCD2Q9BXW9 1451 aa32.01■■■□□ 2.71
CHODL-201ENST00000299295 SUPT16HQ9Y5B9 1047 aaKnown RBP31.92■■■□□ 2.7
CHODL-201ENST00000299295 CUX2O14529 1486 aa31.9■■■□□ 2.7
CHODL-201ENST00000299295 KCNH8Q96L42 1107 aa31.9■■■□□ 2.7
CHODL-201ENST00000299295 RAB3GAP2Q9H2M9 1393 aa31.88■■■□□ 2.69
CHODL-201ENST00000299295 IGF1RP08069 1367 aa31.83■■■□□ 2.69
CHODL-201ENST00000299295 FGD5Q6ZNL6 1462 aa31.82■■■□□ 2.69
CHODL-201ENST00000299295 LAMC3Q9Y6N6 1575 aa31.82■■■□□ 2.68
Retrieved 100 of 20,778 RNA–protein pairs in 263.5 ms