Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC17.58■□□□□ 0.4
CDC34P49427 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDC34P49427 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
CDC34P49427 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDC34P49427 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
CDC34P49427 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC17.57■□□□□ 0.4
CDC34P49427 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDC34P49427 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDC34P49427 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDC34P49427 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CDC34P49427 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CDC34P49427 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC17.57■□□□□ 0.4
CDC34P49427 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
CDC34P49427 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDC34P49427 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CDC34P49427 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDC34P49427 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDC34P49427 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC17.57■□□□□ 0.4
CDC34P49427 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDC34P49427 AC139530.1-201ENST00000575312 1977 ntBASIC17.57■□□□□ 0.4
CDC34P49427 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
CDC34P49427 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CDC34P49427 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDC34P49427 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC17.56■□□□□ 0.4
CDC34P49427 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC17.56■□□□□ 0.4
CDC34P49427 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDC34P49427 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDC34P49427 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDC34P49427 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDC34P49427 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CDC34P49427 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDC34P49427 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CDC34P49427 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
CDC34P49427 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDC34P49427 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC17.56■□□□□ 0.4
CDC34P49427 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDC34P49427 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDC34P49427 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CDC34P49427 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDC34P49427 MED17-221ENST00000639724 2317 ntTSL 5 BASIC17.55■□□□□ 0.4
CDC34P49427 ALDH1A3-203ENST00000557963 1670 ntBASIC17.55■□□□□ 0.4
CDC34P49427 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC17.55■□□□□ 0.4
CDC34P49427 EI24-204ENST00000527235 1625 ntTSL 5 BASIC17.55■□□□□ 0.4
CDC34P49427 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CDC34P49427 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CDC34P49427 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDC34P49427 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDC34P49427 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CDC34P49427 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDC34P49427 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC17.55■□□□□ 0.4
CDC34P49427 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC17.55■□□□□ 0.4
CDC34P49427 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC17.55■□□□□ 0.4
CDC34P49427 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDC34P49427 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDC34P49427 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDC34P49427 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDC34P49427 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
CDC34P49427 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDC34P49427 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC17.54■□□□□ 0.4
CDC34P49427 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CDC34P49427 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC17.54■□□□□ 0.4
CDC34P49427 FBXW4P1-201ENST00000426721 2239 ntBASIC17.54■□□□□ 0.4
CDC34P49427 MACF1-219ENST00000484793 834 ntTSL 2 BASIC17.54■□□□□ 0.4
CDC34P49427 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
CDC34P49427 GFER-205ENST00000569451 517 ntTSL 5 BASIC17.54■□□□□ 0.4
CDC34P49427 AC007029.1-201ENST00000604183 313 ntBASIC17.54■□□□□ 0.4
CDC34P49427 RAP2CP1-202ENST00000605179 643 ntBASIC17.54■□□□□ 0.4
CDC34P49427 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDC34P49427 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
CDC34P49427 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CDC34P49427 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDC34P49427 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDC34P49427 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC17.53■□□□□ 0.4
CDC34P49427 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC17.53■□□□□ 0.4
CDC34P49427 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
CDC34P49427 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDC34P49427 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDC34P49427 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CDC34P49427 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDC34P49427 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDC34P49427 RPS2P35-201ENST00000443417 897 ntBASIC17.53■□□□□ 0.4
CDC34P49427 SSSCA1-AS1-201ENST00000567594 614 ntBASIC17.53■□□□□ 0.4
CDC34P49427 AC026202.3-201ENST00000600805 1127 ntBASIC17.53■□□□□ 0.4
CDC34P49427 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
CDC34P49427 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDC34P49427 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDC34P49427 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDC34P49427 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC17.53■□□□□ 0.4
CDC34P49427 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
CDC34P49427 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDC34P49427 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
CDC34P49427 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CDC34P49427 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CDC34P49427 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CDC34P49427 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CDC34P49427 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
CDC34P49427 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CDC34P49427 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
CDC34P49427 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CDC34P49427 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms