RNA–Protein interactions for RNA: ENST00000284110.1

HS3ST3A1-201, Transcript of heparan sulfate-glucosamine 3-sulfotransferase 3A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HS3ST3A1, Length 2,527 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HS3ST3A1-201ENST00000284110 NISCHQ9Y2I1 1504 aa39.22■■■■□ 3.87
HS3ST3A1-201ENST00000284110 PELP1Q8IZL8 1130 aaKnown RBP34.34■■■■□ 3.09
HS3ST3A1-201ENST00000284110 MYT1Q01538 1121 aa33.52■■■□□ 2.96
HS3ST3A1-201ENST00000284110 CCDC180Q9P1Z9 1646 aa33.44■■■□□ 2.94
HS3ST3A1-201ENST00000284110 SHROOM4Q9ULL8 1493 aa33.32■■■□□ 2.92
HS3ST3A1-201ENST00000284110 ZCCHC6Q5VYS8 1495 aaKnown RBP33.04■■■□□ 2.88
HS3ST3A1-201ENST00000284110 HRCP23327 699 aa33.01■■■□□ 2.87
HS3ST3A1-201ENST00000284110 DCAF8L2P0C7V8 631 aa32.95■■■□□ 2.87
HS3ST3A1-201ENST00000284110 SUPT5HO00267 1087 aaKnown RBP32.44■■■□□ 2.78
HS3ST3A1-201ENST00000284110 SCAF1Q9H7N4 1312 aaKnown RBP32.1■■■□□ 2.73
HS3ST3A1-201ENST00000284110 PPARGC1BQ86YN6 1023 aaKnown RBP32.1■■■□□ 2.73
HS3ST3A1-201ENST00000284110 DCAF1Q9Y4B6 1507 aa32.05■■■□□ 2.72
HS3ST3A1-201ENST00000284110 TTBK1Q5TCY1 1321 aaPredicted RBP32.03■■■□□ 2.72
HS3ST3A1-201ENST00000284110 ABCC9O60706 1549 aa31.66■■■□□ 2.66
HS3ST3A1-201ENST00000284110 SCRIBQ14160 1630 aa31.46■■■□□ 2.63
HS3ST3A1-201ENST00000284110 PCGF6Q9BYE7 350 aa31.35■■■□□ 2.61
HS3ST3A1-201ENST00000284110 MYO15BQ96JP2 1530 aa31.28■■■□□ 2.6
HS3ST3A1-201ENST00000284110 CHIC1Q5VXU3 224 aa31.2■■■□□ 2.59
HS3ST3A1-201ENST00000284110 PRKCSHP14314 528 aaPredicted RBP31.18■■■□□ 2.58
HS3ST3A1-201ENST00000284110 NACADO15069 1562 aa31.08■■■□□ 2.57
HS3ST3A1-201ENST00000284110 BCL11AQ9H165 835 aa31.06■■■□□ 2.56
HS3ST3A1-201ENST00000284110 RSF1Q96T23 1441 aaPredicted RBP30.9■■■□□ 2.54
HS3ST3A1-201ENST00000284110 ACIN1Q9UKV3 1341 aaKnown RBP30.81■■■□□ 2.52
HS3ST3A1-201ENST00000284110 FAM9AQ8IZU1 332 aaPredicted RBP30.77■■■□□ 2.52
HS3ST3A1-201ENST00000284110 CECR2Q9BXF3 1484 aa30.74■■■□□ 2.51
HS3ST3A1-201ENST00000284110 RB1CC1Q8TDY2 1594 aa30.71■■■□□ 2.51
HS3ST3A1-201ENST00000284110 NEUROD1Q13562 356 aa30.61■■■□□ 2.49
HS3ST3A1-201ENST00000284110 GTF3C3Q9Y5Q9 886 aa30.57■■■□□ 2.49
HS3ST3A1-201ENST00000284110 CENPBP07199 599 aaPredicted RBP30.56■■■□□ 2.48
HS3ST3A1-201ENST00000284110 MROH2BQ7Z745 1585 aa30.54■■■□□ 2.48
HS3ST3A1-201ENST00000284110 ZEB1P37275 1124 aaPredicted RBP30.42■■■□□ 2.46
HS3ST3A1-201ENST00000284110 ERICH6Q7L0X2 663 aa30.41■■■□□ 2.46
HS3ST3A1-201ENST00000284110 LOC105371045A0A1W2PR82 267 aa30.38■■■□□ 2.45
HS3ST3A1-201ENST00000284110 WIZO95785 1651 aa30.35■■■□□ 2.45
HS3ST3A1-201ENST00000284110 APLP2Q06481 763 aa30.33■■■□□ 2.45
HS3ST3A1-201ENST00000284110 UNC13AQ9UPW8 1703 aa30.3■■■□□ 2.44
HS3ST3A1-201ENST00000284110 PABPN1Q86U42 306 aaKnown RBP eCLIP30.27■■■□□ 2.44
HS3ST3A1-201ENST00000284110 TRIM41Q8WV44 630 aa30.17■■■□□ 2.42
HS3ST3A1-201ENST00000284110 BAZ1AQ9NRL2 1556 aaPredicted RBP30.12■■■□□ 2.41
HS3ST3A1-201ENST00000284110 TRIM26Q12899 539 aaPredicted RBP30.02■■■□□ 2.4
HS3ST3A1-201ENST00000284110 ANP32EQ9BTT0 268 aa29.98■■■□□ 2.39
HS3ST3A1-201ENST00000284110 BICRAQ9NZM4 1560 aa29.96■■■□□ 2.39
HS3ST3A1-201ENST00000284110 SMARCA4P51532 1647 aa29.96■■■□□ 2.39
HS3ST3A1-201ENST00000284110 EHMT2Q96KQ7 1210 aa29.9■■■□□ 2.38
HS3ST3A1-201ENST00000284110 TOP2AP11388 1531 aaKnown RBP29.75■■■□□ 2.35
HS3ST3A1-201ENST00000284110 CCDC88BA6NC98 1476 aa29.72■■■□□ 2.35
HS3ST3A1-201ENST00000284110 CSRNP3Q8WYN3 585 aa29.68■■■□□ 2.34
HS3ST3A1-201ENST00000284110 SMARCA2P51531 1590 aa29.62■■■□□ 2.33
HS3ST3A1-201ENST00000284110 EIF4G1Q04637 1599 aaKnown RBP29.6■■■□□ 2.33
HS3ST3A1-201ENST00000284110 ABCC8Q09428 1581 aa29.54■■■□□ 2.32
HS3ST3A1-201ENST00000284110 ATAD2BQ9ULI0 1458 aa29.34■■■□□ 2.29
HS3ST3A1-201ENST00000284110 DIEXFQ68CQ4 756 aaKnown RBP29.33■■■□□ 2.29
HS3ST3A1-201ENST00000284110 PEG3Q9GZU2 1588 aa29.33■■■□□ 2.29
HS3ST3A1-201ENST00000284110 BAZ1BQ9UIG0 1483 aaKnown RBP29.24■■■□□ 2.27
HS3ST3A1-201ENST00000284110 SOGA1O94964 1423 aa29.17■■■□□ 2.26
HS3ST3A1-201ENST00000284110 TSHZ2Q9NRE2 1034 aa29.11■■■□□ 2.25
HS3ST3A1-201ENST00000284110 RUSC2Q8N2Y8 1516 aa29.09■■■□□ 2.25
HS3ST3A1-201ENST00000284110 WRNQ14191 1432 aaPredicted RBP eCLIP29.03■■■□□ 2.24
HS3ST3A1-201ENST00000284110 SYNJ1O43426 1573 aa28.91■■■□□ 2.22
HS3ST3A1-201ENST00000284110 ANO8Q9HCE9 1232 aaPredicted RBP28.91■■■□□ 2.22
HS3ST3A1-201ENST00000284110 YTHDC1Q96MU7 727 aaKnown RBP28.9■■■□□ 2.22
HS3ST3A1-201ENST00000284110 SLC24A1O60721 1099 aa28.87■■■□□ 2.21
HS3ST3A1-201ENST00000284110 UBTFP17480 764 aaKnown RBP28.84■■■□□ 2.21
HS3ST3A1-201ENST00000284110 NCAPD3P42695 1498 aa28.82■■■□□ 2.2
HS3ST3A1-201ENST00000284110 SUPT16HQ9Y5B9 1047 aaKnown RBP28.77■■■□□ 2.2
HS3ST3A1-201ENST00000284110 CLSPNQ9HAW4 1339 aa28.75■■■□□ 2.19
HS3ST3A1-201ENST00000284110 CEP162Q5TB80 1403 aa28.73■■■□□ 2.19
HS3ST3A1-201ENST00000284110 EEA1Q15075 1411 aa28.72■■■□□ 2.19
HS3ST3A1-201ENST00000284110 HMGXB3Q12766 1538 aa28.71■■■□□ 2.19
HS3ST3A1-201ENST00000284110 UBE2Q2Q8WVN8 375 aa28.68■■■□□ 2.18
HS3ST3A1-201ENST00000284110 TNIKQ9UKE5 1360 aa28.67■■■□□ 2.18
HS3ST3A1-201ENST00000284110 GOLGA3Q08378 1498 aa28.59■■■□□ 2.17
HS3ST3A1-201ENST00000284110 RANGAP1P46060 587 aaPredicted RBP28.56■■■□□ 2.16
HS3ST3A1-201ENST00000284110 TOP2BQ02880 1626 aa28.53■■■□□ 2.16
HS3ST3A1-201ENST00000284110 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.47■■■□□ 2.15
HS3ST3A1-201ENST00000284110 CFTRP13569 1480 aa28.47■■■□□ 2.15
HS3ST3A1-201ENST00000284110 CEP164Q9UPV0 1460 aa28.47■■■□□ 2.15
HS3ST3A1-201ENST00000284110 EIF5BO60841 1220 aaKnown RBP28.46■■■□□ 2.15
HS3ST3A1-201ENST00000284110 CCER1Q8TC90 406 aaPredicted RBP28.46■■■□□ 2.15
HS3ST3A1-201ENST00000284110 RAPGEF2Q9Y4G8 1499 aa28.45■■■□□ 2.14
HS3ST3A1-201ENST00000284110 CUX1P39880 1505 aa28.43■■■□□ 2.14
HS3ST3A1-201ENST00000284110 MIER1Q8N108 512 aa28.43■■■□□ 2.14
HS3ST3A1-201ENST00000284110 CC2D2AQ9P2K1 1620 aa28.42■■■□□ 2.14
HS3ST3A1-201ENST00000284110 BIVM-ERCC5R4GMW8 1640 aa28.4■■■□□ 2.14
HS3ST3A1-201ENST00000284110 ZNF316A6NFI3 1004 aaPredicted RBP28.4■■■□□ 2.14
HS3ST3A1-201ENST00000284110 SALL2Q9Y467 1007 aaPredicted RBP28.39■■■□□ 2.14
HS3ST3A1-201ENST00000284110 KIF21BO75037 1637 aa28.38■■■□□ 2.13
HS3ST3A1-201ENST00000284110 CLIP1P30622 1438 aa28.3■■■□□ 2.12
HS3ST3A1-201ENST00000284110 CADPSQ9ULU8 1353 aa28.29■■■□□ 2.12
HS3ST3A1-201ENST00000284110 DAXXQ9UER7 740 aaPredicted RBP28.24■■■□□ 2.11
HS3ST3A1-201ENST00000284110 RBM19Q9Y4C8 960 aaKnown RBP28.23■■■□□ 2.11
HS3ST3A1-201ENST00000284110 MYT1LQ9UL68 1186 aa28.22■■■□□ 2.11
HS3ST3A1-201ENST00000284110 ERICH6BQ5W0A0 696 aa28.21■■■□□ 2.11
HS3ST3A1-201ENST00000284110 MSH5O43196 834 aa28.2■■■□□ 2.1
HS3ST3A1-201ENST00000284110 CCDC136Q96JN2 1154 aa28.19■■■□□ 2.1
HS3ST3A1-201ENST00000284110 KIF27Q86VH2 1401 aa28.15■■■□□ 2.1
HS3ST3A1-201ENST00000284110 PRXQ9BXM0 1461 aa28.14■■■□□ 2.1
HS3ST3A1-201ENST00000284110 DEKP35659 375 aaKnown RBP28.13■■■□□ 2.09
HS3ST3A1-201ENST00000284110 DNAJC5BQ9UF47 199 aa28.12■■■□□ 2.09
HS3ST3A1-201ENST00000284110 PRDM2Q13029 1718 aa28.09■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms