RNA–Protein interactions for RNA: ENST00000497245.2

LRCH4-209, Transcript of leucine rich repeats and calponin homology domain containing 4, humanhuman

TSL 5 BASIC

Gene LRCH4, Length 2,014 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4-209ENST00000497245 NISCHQ9Y2I1 1504 aa46.98■■■■■ 5.11
LRCH4-209ENST00000497245 CCDC180Q9P1Z9 1646 aa41.06■■■■■ 4.16
LRCH4-209ENST00000497245 ABCC9O60706 1549 aa39.51■■■■□ 3.92
LRCH4-209ENST00000497245 ZCCHC6Q5VYS8 1495 aaKnown RBP39.33■■■■□ 3.89
LRCH4-209ENST00000497245 DCAF8L2P0C7V8 631 aa39.23■■■■□ 3.87
LRCH4-209ENST00000497245 DCAF1Q9Y4B6 1507 aa38.75■■■■□ 3.79
LRCH4-209ENST00000497245 MYO15BQ96JP2 1530 aa38.46■■■■□ 3.75
LRCH4-209ENST00000497245 NACADO15069 1562 aa38.44■■■■□ 3.74
LRCH4-209ENST00000497245 RB1CC1Q8TDY2 1594 aa38.24■■■■□ 3.71
LRCH4-209ENST00000497245 SHROOM4Q9ULL8 1493 aa38.16■■■■□ 3.7
LRCH4-209ENST00000497245 SCRIBQ14160 1630 aa37.84■■■■□ 3.65
LRCH4-209ENST00000497245 UNC13AQ9UPW8 1703 aa37.4■■■■□ 3.58
LRCH4-209ENST00000497245 PABPN1Q86U42 306 aaKnown RBP eCLIP37.27■■■■□ 3.56
LRCH4-209ENST00000497245 BICRAQ9NZM4 1560 aa37.11■■■■□ 3.53
LRCH4-209ENST00000497245 CECR2Q9BXF3 1484 aa36.62■■■■□ 3.45
LRCH4-209ENST00000497245 SUPT5HO00267 1087 aaKnown RBP36.49■■■■□ 3.43
LRCH4-209ENST00000497245 MROH2BQ7Z745 1585 aa36.31■■■■□ 3.4
LRCH4-209ENST00000497245 RSF1Q96T23 1441 aaPredicted RBP36.3■■■■□ 3.4
LRCH4-209ENST00000497245 BAZ1AQ9NRL2 1556 aaPredicted RBP36.29■■■■□ 3.4
LRCH4-209ENST00000497245 SMARCA4P51532 1647 aa36.18■■■■□ 3.38
LRCH4-209ENST00000497245 EIF4G1Q04637 1599 aaKnown RBP36.06■■■■□ 3.36
LRCH4-209ENST00000497245 WIZO95785 1651 aa35.96■■■■□ 3.35
LRCH4-209ENST00000497245 ATAD2BQ9ULI0 1458 aa35.78■■■■□ 3.32
LRCH4-209ENST00000497245 PEG3Q9GZU2 1588 aa35.72■■■■□ 3.31
LRCH4-209ENST00000497245 SMARCA2P51531 1590 aa35.68■■■■□ 3.3
LRCH4-209ENST00000497245 CC2D2AQ9P2K1 1620 aa35.66■■■■□ 3.3
LRCH4-209ENST00000497245 BAZ1BQ9UIG0 1483 aaKnown RBP35.55■■■■□ 3.28
LRCH4-209ENST00000497245 NCAPD3P42695 1498 aa35.53■■■■□ 3.28
LRCH4-209ENST00000497245 TOP2AP11388 1531 aaKnown RBP35.53■■■■□ 3.28
LRCH4-209ENST00000497245 DNAJC5BQ9UF47 199 aa35.4■■■■□ 3.26
LRCH4-209ENST00000497245 HMGXB3Q12766 1538 aa35.37■■■■□ 3.25
LRCH4-209ENST00000497245 CHIC1Q5VXU3 224 aa35.37■■■■□ 3.25
LRCH4-209ENST00000497245 CCDC88BA6NC98 1476 aa35.24■■■■□ 3.23
LRCH4-209ENST00000497245 CADPSQ9ULU8 1353 aa34.64■■■■□ 3.14
LRCH4-209ENST00000497245 HRCP23327 699 aa34.62■■■■□ 3.13
LRCH4-209ENST00000497245 CFTRP13569 1480 aa34.61■■■■□ 3.13
LRCH4-209ENST00000497245 NESP48681 1621 aa34.53■■■■□ 3.12
LRCH4-209ENST00000497245 LAMC3Q9Y6N6 1575 aa34.36■■■■□ 3.09
LRCH4-209ENST00000497245 ABCC8Q09428 1581 aa34.34■■■■□ 3.09
LRCH4-209ENST00000497245 PCGF6Q9BYE7 350 aa34.33■■■■□ 3.09
LRCH4-209ENST00000497245 TRIM41Q8WV44 630 aa34.3■■■■□ 3.08
LRCH4-209ENST00000497245 FANCD2Q9BXW9 1451 aa34.24■■■■□ 3.07
LRCH4-209ENST00000497245 PRDM2Q13029 1718 aa34.22■■■■□ 3.07
LRCH4-209ENST00000497245 PDS5BQ9NTI5 1447 aa34.19■■■■□ 3.06
LRCH4-209ENST00000497245 WRNQ14191 1432 aaPredicted RBP eCLIP34.18■■■■□ 3.06
LRCH4-209ENST00000497245 LOC105371045A0A1W2PR82 267 aa34.17■■■■□ 3.06
LRCH4-209ENST00000497245 CEP164Q9UPV0 1460 aa34.05■■■■□ 3.04
LRCH4-209ENST00000497245 SYNJ1O43426 1573 aa34.02■■■■□ 3.04
LRCH4-209ENST00000497245 KIF21AQ7Z4S6 1674 aa33.99■■■■□ 3.03
LRCH4-209ENST00000497245 CUX1P39880 1505 aa33.96■■■■□ 3.03
LRCH4-209ENST00000497245 ERCC6Q03468 1493 aa33.92■■■■□ 3.02
LRCH4-209ENST00000497245 TOP2BQ02880 1626 aa33.88■■■■□ 3.01
LRCH4-209ENST00000497245 TRIM26Q12899 539 aaPredicted RBP33.84■■■■□ 3.01
LRCH4-209ENST00000497245 URB2Q14146 1524 aaKnown RBP33.83■■■■□ 3.01
LRCH4-209ENST00000497245 BIVM-ERCC5R4GMW8 1640 aa33.81■■■■□ 3
LRCH4-209ENST00000497245 TOPBP1Q92547 1522 aa33.79■■■■□ 3
LRCH4-209ENST00000497245 DNMBPQ6XZF7 1577 aa33.77■■■■□ 3
LRCH4-209ENST00000497245 MRC2Q9UBG0 1479 aa33.75■■■□□ 2.99
LRCH4-209ENST00000497245 FAM9AQ8IZU1 332 aaPredicted RBP33.74■■■□□ 2.99
LRCH4-209ENST00000497245 FGD5Q6ZNL6 1462 aa33.69■■■□□ 2.98
LRCH4-209ENST00000497245 SOGA1O94964 1423 aa33.64■■■□□ 2.98
LRCH4-209ENST00000497245 PPARGC1BQ86YN6 1023 aaKnown RBP33.62■■■□□ 2.97
LRCH4-209ENST00000497245 POLA1P09884 1462 aaPredicted RBP33.61■■■□□ 2.97
LRCH4-209ENST00000497245 WDR62O43379 1518 aa33.55■■■□□ 2.96
LRCH4-209ENST00000497245 THOC2Q8NI27 1593 aaKnown RBP33.55■■■□□ 2.96
LRCH4-209ENST00000497245 RUSC2Q8N2Y8 1516 aa33.54■■■□□ 2.96
LRCH4-209ENST00000497245 RAD54L2Q9Y4B4 1467 aa33.54■■■□□ 2.96
LRCH4-209ENST00000497245 CUX2O14529 1486 aa33.41■■■□□ 2.94
LRCH4-209ENST00000497245 CSRNP3Q8WYN3 585 aa33.36■■■□□ 2.93
LRCH4-209ENST00000497245 KIF27Q86VH2 1401 aa33.36■■■□□ 2.93
LRCH4-209ENST00000497245 EHMT2Q96KQ7 1210 aa33.35■■■□□ 2.93
LRCH4-209ENST00000497245 ABCA10Q8WWZ4 1543 aa33.34■■■□□ 2.93
LRCH4-209ENST00000497245 EEA1Q15075 1411 aa33.34■■■□□ 2.93
LRCH4-209ENST00000497245 TDRD9Q8NDG6 1382 aaKnown RBP33.31■■■□□ 2.92
LRCH4-209ENST00000497245 ZEB1P37275 1124 aaPredicted RBP33.31■■■□□ 2.92
LRCH4-209ENST00000497245 TARBP1Q13395 1621 aaKnown RBP33.28■■■□□ 2.92
LRCH4-209ENST00000497245 IFT140Q96RY7 1462 aa33.25■■■□□ 2.91
LRCH4-209ENST00000497245 WDR97A6NE52 1622 aa33.18■■■□□ 2.9
LRCH4-209ENST00000497245 ZNF608Q9ULD9 1512 aaPredicted RBP33.16■■■□□ 2.9
LRCH4-209ENST00000497245 AQRO60306 1485 aaKnown RBP eCLIP33.16■■■□□ 2.94e-7■■■■■ 33
LRCH4-209ENST00000497245 IGF1RP08069 1367 aa33.16■■■□□ 2.9
LRCH4-209ENST00000497245 GAPVD1Q14C86 1478 aa33.12■■■□□ 2.89
LRCH4-209ENST00000497245 ABCA5Q8WWZ7 1642 aa33.06■■■□□ 2.88
LRCH4-209ENST00000497245 PRXQ9BXM0 1461 aa32.98■■■□□ 2.87
LRCH4-209ENST00000497245 CARMIL1Q5VZK9 1371 aa32.98■■■□□ 2.87
LRCH4-209ENST00000497245 RAPGEF2Q9Y4G8 1499 aa32.95■■■□□ 2.87
LRCH4-209ENST00000497245 UBTFP17480 764 aaKnown RBP32.95■■■□□ 2.87
LRCH4-209ENST00000497245 EIF4G3O43432 1585 aaKnown RBP32.95■■■□□ 2.86
LRCH4-209ENST00000497245 GRIN2BQ13224 1484 aa32.92■■■□□ 2.86
LRCH4-209ENST00000497245 ERICH3Q5RHP9 1530 aa32.92■■■□□ 2.86
LRCH4-209ENST00000497245 KIF21BO75037 1637 aa32.91■■■□□ 2.86
LRCH4-209ENST00000497245 GOLGA3Q08378 1498 aa32.9■■■□□ 2.86
LRCH4-209ENST00000497245 PBRM1Q86U86 1689 aa32.85■■■□□ 2.85
LRCH4-209ENST00000497245 CUL7Q14999 1698 aa32.79■■■□□ 2.84
LRCH4-209ENST00000497245 SNAPC4Q5SXM2 1469 aa32.78■■■□□ 2.84
LRCH4-209ENST00000497245 FHAD1B1AJZ9 1412 aa32.74■■■□□ 2.83
LRCH4-209ENST00000497245 TNIKQ9UKE5 1360 aa32.72■■■□□ 2.83
LRCH4-209ENST00000497245 FBLN2P98095 1184 aa32.68■■■□□ 2.82
LRCH4-209ENST00000497245 ADAMTS12P58397 1594 aa32.68■■■□□ 2.82
LRCH4-209ENST00000497245 MAGI1Q96QZ7 1491 aaPredicted RBP32.67■■■□□ 2.82
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms