RNA–Protein interactions for RNA: ENST00000512681.5

SPOCK3-222, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3, humanhuman

TSL 2 BASIC

Gene SPOCK3, Length 1,457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK3-222ENST00000512681 NISCHQ9Y2I1 1504 aa52.02■■■■■ 5.92
SPOCK3-222ENST00000512681 CCDC180Q9P1Z9 1646 aa45.92■■■■■ 4.94
SPOCK3-222ENST00000512681 ABCC9O60706 1549 aa44.26■■■■■ 4.68
SPOCK3-222ENST00000512681 ZCCHC6Q5VYS8 1495 aaKnown RBP43.48■■■■■ 4.55
SPOCK3-222ENST00000512681 DCAF8L2P0C7V8 631 aa43.1■■■■■ 4.49
SPOCK3-222ENST00000512681 DCAF1Q9Y4B6 1507 aa43.09■■■■■ 4.49
SPOCK3-222ENST00000512681 MYO15BQ96JP2 1530 aa43.02■■■■■ 4.48
SPOCK3-222ENST00000512681 NACADO15069 1562 aa43.02■■■■■ 4.48
SPOCK3-222ENST00000512681 RB1CC1Q8TDY2 1594 aa42.88■■■■■ 4.46
SPOCK3-222ENST00000512681 SCRIBQ14160 1630 aa41.93■■■■■ 4.3
SPOCK3-222ENST00000512681 UNC13AQ9UPW8 1703 aa41.92■■■■■ 4.3
SPOCK3-222ENST00000512681 BICRAQ9NZM4 1560 aa41.59■■■■■ 4.25
SPOCK3-222ENST00000512681 PABPN1Q86U42 306 aaKnown RBP eCLIP41.47■■■■■ 4.23
SPOCK3-222ENST00000512681 SHROOM4Q9ULL8 1493 aa41.46■■■■■ 4.23
SPOCK3-222ENST00000512681 CECR2Q9BXF3 1484 aa40.45■■■■■ 4.07
SPOCK3-222ENST00000512681 EIF4G1Q04637 1599 aaKnown RBP40.42■■■■■ 4.06
SPOCK3-222ENST00000512681 BAZ1AQ9NRL2 1556 aaPredicted RBP40.25■■■■■ 4.03
SPOCK3-222ENST00000512681 SMARCA4P51532 1647 aa40.2■■■■■ 4.03
SPOCK3-222ENST00000512681 MROH2BQ7Z745 1585 aa40.1■■■■■ 4.01
SPOCK3-222ENST00000512681 CC2D2AQ9P2K1 1620 aa40.07■■■■■ 4.01
SPOCK3-222ENST00000512681 DNAJC5BQ9UF47 199 aa40.03■■■■■ 4
SPOCK3-222ENST00000512681 RSF1Q96T23 1441 aaPredicted RBP39.9■■■■□ 3.98
SPOCK3-222ENST00000512681 PEG3Q9GZU2 1588 aa39.83■■■■□ 3.97
SPOCK3-222ENST00000512681 ATAD2BQ9ULI0 1458 aa39.83■■■■□ 3.97
SPOCK3-222ENST00000512681 SMARCA2P51531 1590 aa39.79■■■■□ 3.96
SPOCK3-222ENST00000512681 NCAPD3P42695 1498 aa39.71■■■■□ 3.95
SPOCK3-222ENST00000512681 WIZO95785 1651 aa39.69■■■■□ 3.94
SPOCK3-222ENST00000512681 HMGXB3Q12766 1538 aa39.56■■■■□ 3.92
SPOCK3-222ENST00000512681 BAZ1BQ9UIG0 1483 aaKnown RBP39.5■■■■□ 3.91
SPOCK3-222ENST00000512681 SUPT5HO00267 1087 aaKnown RBP39.35■■■■□ 3.89
SPOCK3-222ENST00000512681 TOP2AP11388 1531 aaKnown RBP39.31■■■■□ 3.88
SPOCK3-222ENST00000512681 CCDC88BA6NC98 1476 aa38.86■■■■□ 3.81
SPOCK3-222ENST00000512681 CADPSQ9ULU8 1353 aa38.57■■■■□ 3.76
SPOCK3-222ENST00000512681 LAMC3Q9Y6N6 1575 aa38.52■■■■□ 3.76
SPOCK3-222ENST00000512681 NESP48681 1621 aa38.52■■■■□ 3.76
SPOCK3-222ENST00000512681 CFTRP13569 1480 aa38.5■■■■□ 3.75
SPOCK3-222ENST00000512681 PRDM2Q13029 1718 aa38.23■■■■□ 3.71
SPOCK3-222ENST00000512681 PDS5BQ9NTI5 1447 aa38.23■■■■□ 3.71
SPOCK3-222ENST00000512681 FANCD2Q9BXW9 1451 aa38.11■■■■□ 3.69
SPOCK3-222ENST00000512681 ERCC6Q03468 1493 aa38.07■■■■□ 3.68
SPOCK3-222ENST00000512681 KIF21AQ7Z4S6 1674 aa38.06■■■■□ 3.68
SPOCK3-222ENST00000512681 CEP164Q9UPV0 1460 aa37.99■■■■□ 3.67
SPOCK3-222ENST00000512681 MRC2Q9UBG0 1479 aa37.81■■■■□ 3.64
SPOCK3-222ENST00000512681 THOC2Q8NI27 1593 aaKnown RBP37.79■■■■□ 3.64
SPOCK3-222ENST00000512681 URB2Q14146 1524 aaKnown RBP37.7■■■■□ 3.63
SPOCK3-222ENST00000512681 CHIC1Q5VXU3 224 aa37.7■■■■□ 3.63
SPOCK3-222ENST00000512681 WDR62O43379 1518 aa37.67■■■■□ 3.62
SPOCK3-222ENST00000512681 ABCC8Q09428 1581 aa37.63■■■■□ 3.61
SPOCK3-222ENST00000512681 DNMBPQ6XZF7 1577 aa37.61■■■■□ 3.61
SPOCK3-222ENST00000512681 TOPBP1Q92547 1522 aa37.59■■■■□ 3.61
SPOCK3-222ENST00000512681 WRNQ14191 1432 aaPredicted RBP eCLIP37.58■■■■□ 3.61
SPOCK3-222ENST00000512681 CUX1P39880 1505 aa37.57■■■■□ 3.61
SPOCK3-222ENST00000512681 SYNJ1O43426 1573 aa37.45■■■■□ 3.59
SPOCK3-222ENST00000512681 CUX2O14529 1486 aa37.45■■■■□ 3.59
SPOCK3-222ENST00000512681 TOP2BQ02880 1626 aa37.43■■■■□ 3.58
SPOCK3-222ENST00000512681 BIVM-ERCC5R4GMW8 1640 aa37.42■■■■□ 3.58
SPOCK3-222ENST00000512681 POLA1P09884 1462 aaPredicted RBP37.32■■■■□ 3.57
SPOCK3-222ENST00000512681 FGD5Q6ZNL6 1462 aa37.32■■■■□ 3.57
SPOCK3-222ENST00000512681 SOGA1O94964 1423 aa37.18■■■■□ 3.54
SPOCK3-222ENST00000512681 IFT140Q96RY7 1462 aa37.17■■■■□ 3.54
SPOCK3-222ENST00000512681 TRIM41Q8WV44 630 aa37.14■■■■□ 3.54
SPOCK3-222ENST00000512681 RAD54L2Q9Y4B4 1467 aa37.14■■■■□ 3.54
SPOCK3-222ENST00000512681 TARBP1Q13395 1621 aaKnown RBP37.14■■■■□ 3.54
SPOCK3-222ENST00000512681 ABCA10Q8WWZ4 1543 aa37.02■■■■□ 3.52
SPOCK3-222ENST00000512681 WDR97A6NE52 1622 aa36.99■■■■□ 3.51
SPOCK3-222ENST00000512681 ZNF608Q9ULD9 1512 aaPredicted RBP36.96■■■■□ 3.51
SPOCK3-222ENST00000512681 TDRD9Q8NDG6 1382 aaKnown RBP36.88■■■■□ 3.49
SPOCK3-222ENST00000512681 AQRO60306 1485 aaKnown RBP eCLIP36.83■■■■□ 3.49
SPOCK3-222ENST00000512681 EIF4G3O43432 1585 aaKnown RBP36.83■■■■□ 3.49
SPOCK3-222ENST00000512681 ABCA5Q8WWZ7 1642 aa36.8■■■■□ 3.48
SPOCK3-222ENST00000512681 GAPVD1Q14C86 1478 aa36.75■■■■□ 3.47
SPOCK3-222ENST00000512681 KIF27Q86VH2 1401 aa36.74■■■■□ 3.47
SPOCK3-222ENST00000512681 GRIN2BQ13224 1484 aa36.66■■■■□ 3.46
SPOCK3-222ENST00000512681 RUSC2Q8N2Y8 1516 aa36.63■■■■□ 3.45
SPOCK3-222ENST00000512681 PBRM1Q86U86 1689 aa36.62■■■■□ 3.45
SPOCK3-222ENST00000512681 ERICH3Q5RHP9 1530 aa36.58■■■■□ 3.45
SPOCK3-222ENST00000512681 IGF1RP08069 1367 aa36.53■■■■□ 3.44
SPOCK3-222ENST00000512681 EEA1Q15075 1411 aa36.51■■■■□ 3.43
SPOCK3-222ENST00000512681 SNAPC4Q5SXM2 1469 aa36.5■■■■□ 3.43
SPOCK3-222ENST00000512681 MAGI1Q96QZ7 1491 aaPredicted RBP36.49■■■■□ 3.43
SPOCK3-222ENST00000512681 ADAMTS12P58397 1594 aa36.39■■■■□ 3.42
SPOCK3-222ENST00000512681 CUL7Q14999 1698 aa36.36■■■■□ 3.41
SPOCK3-222ENST00000512681 FHAD1B1AJZ9 1412 aa36.36■■■■□ 3.41
SPOCK3-222ENST00000512681 CSRNP3Q8WYN3 585 aa36.35■■■■□ 3.41
SPOCK3-222ENST00000512681 SYNJ2O15056 1496 aa36.34■■■■□ 3.41
SPOCK3-222ENST00000512681 FAM9AQ8IZU1 332 aaPredicted RBP36.34■■■■□ 3.41
SPOCK3-222ENST00000512681 CARMIL1Q5VZK9 1371 aa36.31■■■■□ 3.4
SPOCK3-222ENST00000512681 PRXQ9BXM0 1461 aa36.24■■■■□ 3.39
SPOCK3-222ENST00000512681 CHMP7Q8WUX9 453 aaPredicted RBP36.24■■■■□ 3.39
SPOCK3-222ENST00000512681 CHD1O14646 1710 aa36.22■■■■□ 3.39
SPOCK3-222ENST00000512681 FBLN2P98095 1184 aa36.21■■■■□ 3.39
SPOCK3-222ENST00000512681 GRIN2AQ12879 1464 aa36.19■■■■□ 3.38
SPOCK3-222ENST00000512681 RAPGEF2Q9Y4G8 1499 aa36.16■■■■□ 3.38
SPOCK3-222ENST00000512681 LOC105371045A0A1W2PR82 267 aa36.12■■■■□ 3.37
SPOCK3-222ENST00000512681 KIF21BO75037 1637 aa36.07■■■■□ 3.37
SPOCK3-222ENST00000512681 NUP160Q12769 1436 aa36.02■■■■□ 3.36
SPOCK3-222ENST00000512681 OSCARQ8IYS5 282 aa36.01■■■■□ 3.36
SPOCK3-222ENST00000512681 CEP170Q5SW79 1584 aa35.98■■■■□ 3.35
SPOCK3-222ENST00000512681 GOLGA3Q08378 1498 aa35.9■■■■□ 3.34
SPOCK3-222ENST00000512681 CLASP1Q7Z460 1538 aa35.87■■■■□ 3.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms