RNA–Protein interactions for RNA: ENST00000640969.1

KCNMA1-293, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNMA1, Length 5,789 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-293ENST00000640969 DCAF8L2P0C7V8 631 aa33.69■■■□□ 2.98
KCNMA1-293ENST00000640969 SUPT5HO00267 1087 aaKnown RBP32.15■■■□□ 2.74
KCNMA1-293ENST00000640969 PELP1Q8IZL8 1130 aaKnown RBP31.56■■■□□ 2.64
KCNMA1-293ENST00000640969 EHMT2Q96KQ7 1210 aa31.47■■■□□ 2.63
KCNMA1-293ENST00000640969 SHROOM4Q9ULL8 1493 aa31.37■■■□□ 2.61
KCNMA1-293ENST00000640969 NISCHQ9Y2I1 1504 aa30.94■■■□□ 2.54
KCNMA1-293ENST00000640969 APLP2Q06481 763 aa30.9■■■□□ 2.54
KCNMA1-293ENST00000640969 TTBK1Q5TCY1 1321 aaPredicted RBP30.48■■■□□ 2.47
KCNMA1-293ENST00000640969 FAM9AQ8IZU1 332 aaPredicted RBP30.44■■■□□ 2.46
KCNMA1-293ENST00000640969 ERICH6Q7L0X2 663 aa30.38■■■□□ 2.45
KCNMA1-293ENST00000640969 PCGF6Q9BYE7 350 aa30.38■■■□□ 2.45
KCNMA1-293ENST00000640969 CENPBP07199 599 aaPredicted RBP30.23■■■□□ 2.43
KCNMA1-293ENST00000640969 CCER1Q8TC90 406 aaPredicted RBP30.14■■■□□ 2.42
KCNMA1-293ENST00000640969 ZEB1P37275 1124 aaPredicted RBP29.99■■■□□ 2.39
KCNMA1-293ENST00000640969 RANGAP1P46060 587 aaPredicted RBP29.98■■■□□ 2.39
KCNMA1-293ENST00000640969 ATP1B4Q9UN42 357 aaPredicted RBP29.75■■■□□ 2.35
KCNMA1-293ENST00000640969 TRIM41Q8WV44 630 aa29.69■■■□□ 2.34
KCNMA1-293ENST00000640969 NEFLP07196 543 aa29.66■■■□□ 2.34
KCNMA1-293ENST00000640969 YTHDC1Q96MU7 727 aaKnown RBP29.61■■■□□ 2.33
KCNMA1-293ENST00000640969 UBTFP17480 764 aaKnown RBP29.48■■■□□ 2.31
KCNMA1-293ENST00000640969 MYT1Q01538 1121 aa29.44■■■□□ 2.3
KCNMA1-293ENST00000640969 PPARGC1BQ86YN6 1023 aaKnown RBP29.14■■■□□ 2.25
KCNMA1-293ENST00000640969 DAXXQ9UER7 740 aaPredicted RBP28.95■■■□□ 2.23
KCNMA1-293ENST00000640969 TRIM26Q12899 539 aaPredicted RBP28.91■■■□□ 2.22
KCNMA1-293ENST00000640969 POLR3GLQ9BT43 218 aa28.8■■■□□ 2.2
KCNMA1-293ENST00000640969 ITGAEP38570 1179 aa28.74■■■□□ 2.19
KCNMA1-293ENST00000640969 HRCP23327 699 aa28.74■■■□□ 2.19
KCNMA1-293ENST00000640969 MYT1LQ9UL68 1186 aa28.63■■■□□ 2.17
KCNMA1-293ENST00000640969 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.56■■■□□ 2.16
KCNMA1-293ENST00000640969 HNRNPUL2Q1KMD3 747 aaKnown RBP28.56■■■□□ 2.16
KCNMA1-293ENST00000640969 CNGB1Q14028 1251 aaPredicted RBP28.54■■■□□ 2.16
KCNMA1-293ENST00000640969 LOC105371045A0A1W2PR82 267 aa28.36■■■□□ 2.13
KCNMA1-293ENST00000640969 RTL5Q5HYW3 569 aaPredicted RBP28.3■■■□□ 2.12
KCNMA1-293ENST00000640969 ZNF316A6NFI3 1004 aaPredicted RBP28.29■■■□□ 2.12
KCNMA1-293ENST00000640969 SLC4A1APQ9BWU0 796 aaKnown RBP28.24■■■□□ 2.11
KCNMA1-293ENST00000640969 CLSPNQ9HAW4 1339 aa28.21■■■□□ 2.11
KCNMA1-293ENST00000640969 CHIC1Q5VXU3 224 aa28.19■■■□□ 2.1
KCNMA1-293ENST00000640969 DIEXFQ68CQ4 756 aaKnown RBP28.14■■■□□ 2.1
KCNMA1-293ENST00000640969 FAM50AQ14320 339 aaKnown RBP27.91■■■□□ 2.06
KCNMA1-293ENST00000640969 BCANQ96GW7 911 aa27.86■■■□□ 2.05
KCNMA1-293ENST00000640969 TRIM52Q96A61 297 aa27.84■■■□□ 2.05
KCNMA1-293ENST00000640969 NEUROD1Q13562 356 aa27.79■■■□□ 2.04
KCNMA1-293ENST00000640969 GTF3C3Q9Y5Q9 886 aa27.71■■■□□ 2.03
KCNMA1-293ENST00000640969 CDK11AQ9UQ88 783 aaPredicted RBP27.67■■■□□ 2.02
KCNMA1-293ENST00000640969 ANP32CO43423 234 aa27.65■■■□□ 2.02
KCNMA1-293ENST00000640969 ZNF326Q5BKZ1 582 aaKnown RBP27.6■■■□□ 2.01
KCNMA1-293ENST00000640969 ZBTB47Q9UFB7 747 aaPredicted RBP27.6■■■□□ 2.01
KCNMA1-293ENST00000640969 CANXP27824 592 aaKnown RBP27.45■■□□□ 1.98
KCNMA1-293ENST00000640969 BCL11AQ9H165 835 aa27.4■■□□□ 1.98
KCNMA1-293ENST00000640969 SLC24A1O60721 1099 aa27.33■■□□□ 1.96
KCNMA1-293ENST00000640969 ANP32AP39687 249 aaKnown RBP27.25■■□□□ 1.95
KCNMA1-293ENST00000640969 NEFMP07197 916 aa27.2■■□□□ 1.94
KCNMA1-293ENST00000640969 ACIN1Q9UKV3 1341 aaKnown RBP27.19■■□□□ 1.94
KCNMA1-293ENST00000640969 NPM2Q86SE8 214 aaKnown RBP27.16■■□□□ 1.94
KCNMA1-293ENST00000640969 PABPN1Q86U42 306 aaKnown RBP eCLIP27.14■■□□□ 1.93
KCNMA1-293ENST00000640969 FBLN2P98095 1184 aa27.09■■□□□ 1.93
KCNMA1-293ENST00000640969 ARID3CA6NKF2 412 aa26.99■■□□□ 1.91
KCNMA1-293ENST00000640969 P3H3Q8IVL6 736 aa26.98■■□□□ 1.91
KCNMA1-293ENST00000640969 FKBP8Q14318 412 aa26.93■■□□□ 1.9
KCNMA1-293ENST00000640969 ANP32BQ92688 251 aaKnown RBP26.93■■□□□ 1.9
KCNMA1-293ENST00000640969 EIF5BO60841 1220 aaKnown RBP26.92■■□□□ 1.9
KCNMA1-293ENST00000640969 ZNF777Q9ULD5 760 aaPredicted RBP26.89■■□□□ 1.9
KCNMA1-293ENST00000640969 ABCC9O60706 1549 aa26.86■■□□□ 1.89
KCNMA1-293ENST00000640969 HSP90AA1P07900 732 aaKnown RBP26.86■■□□□ 1.89
KCNMA1-293ENST00000640969 UPF2Q9HAU5 1272 aaKnown RBP26.77■■□□□ 1.88
KCNMA1-293ENST00000640969 CSRNP3Q8WYN3 585 aa26.77■■□□□ 1.88
KCNMA1-293ENST00000640969 HNRNPUQ00839 825 aaKnown RBP eCLIP26.76■■□□□ 1.87
KCNMA1-293ENST00000640969 TONSLQ96HA7 1378 aa26.73■■□□□ 1.87
KCNMA1-293ENST00000640969 FAM9BQ8IZU0 186 aa26.71■■□□□ 1.87
KCNMA1-293ENST00000640969 DDX10Q13206 875 aaKnown RBP26.63■■□□□ 1.85
KCNMA1-293ENST00000640969 SALL2Q9Y467 1007 aaPredicted RBP26.63■■□□□ 1.85
KCNMA1-293ENST00000640969 CHGAP10645 457 aaKnown RBP26.62■■□□□ 1.85
KCNMA1-293ENST00000640969 NBR1Q14596 966 aa26.59■■□□□ 1.85
KCNMA1-293ENST00000640969 CCDC136Q96JN2 1154 aa26.56■■□□□ 1.84
KCNMA1-293ENST00000640969 GLIPR1L2Q4G1C9 344 aa26.56■■□□□ 1.84
KCNMA1-293ENST00000640969 ESF1Q9H501 851 aaKnown RBP26.56■■□□□ 1.84
KCNMA1-293ENST00000640969 STAG3Q9UJ98 1225 aa26.54■■□□□ 1.84
KCNMA1-293ENST00000640969 ARXQ96QS3 562 aa26.51■■□□□ 1.83
KCNMA1-293ENST00000640969 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.5■■□□□ 1.83
KCNMA1-293ENST00000640969 TMC1Q8TDI8 760 aa26.48■■□□□ 1.83
KCNMA1-293ENST00000640969 WDR43Q15061 677 aaKnown RBP eCLIP26.42■■□□□ 1.82
KCNMA1-293ENST00000640969 PLPPR3Q6T4P5 718 aa26.38■■□□□ 1.81
KCNMA1-293ENST00000640969 CHIC2Q9UKJ5 165 aa26.36■■□□□ 1.81
KCNMA1-293ENST00000640969 MRS2Q9HD23 443 aa26.36■■□□□ 1.81
KCNMA1-293ENST00000640969 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.33■■□□□ 1.81
KCNMA1-293ENST00000640969 IRX6P78412 446 aaPredicted RBP26.32■■□□□ 1.8
KCNMA1-293ENST00000640969 DCAF1Q9Y4B6 1507 aa26.29■■□□□ 1.8
KCNMA1-293ENST00000640969 KDM2AQ9Y2K7 1162 aa26.25■■□□□ 1.79
KCNMA1-293ENST00000640969 MYH16Q9H6N6 1097 aa26.23■■□□□ 1.79
KCNMA1-293ENST00000640969 MIER1Q8N108 512 aa26.2■■□□□ 1.78
KCNMA1-293ENST00000640969 NPM1P06748 294 aaKnown RBP eCLIP26.17■■□□□ 1.78
KCNMA1-293ENST00000640969 SCAF1Q9H7N4 1312 aaKnown RBP26.17■■□□□ 1.78
KCNMA1-293ENST00000640969 HIRIP3Q9BW71 556 aaPredicted RBP26.14■■□□□ 1.78
KCNMA1-293ENST00000640969 DDRGK1Q96HY6 314 aa26.12■■□□□ 1.77
KCNMA1-293ENST00000640969 BECN1Q14457 450 aa26.1■■□□□ 1.77
KCNMA1-293ENST00000640969 TSPY4P0CV99 314 aa26.09■■□□□ 1.77
KCNMA1-293ENST00000640969 TSPY10P0CW01 314 aa26.09■■□□□ 1.77
KCNMA1-293ENST00000640969 CDK11BP21127 795 aaKnown RBP26.09■■□□□ 1.77
KCNMA1-293ENST00000640969 NCLP19338 710 aaKnown RBP26.05■■□□□ 1.76
KCNMA1-293ENST00000640969 TRIM44Q96DX7 344 aaPredicted RBP26.05■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms