RNA–Protein interactions for RNA: ENST00000402685.6

PDZRN4-202, Transcript of PDZ domain containing ring finger 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PDZRN4, Length 3,347 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN4-202ENST00000402685 NISCHQ9Y2I1 1504 aa38.57■■■■□ 3.77
PDZRN4-202ENST00000402685 SHROOM4Q9ULL8 1493 aa35.6■■■■□ 3.29
PDZRN4-202ENST00000402685 SUPT5HO00267 1087 aaKnown RBP35.48■■■■□ 3.27
PDZRN4-202ENST00000402685 PPARGC1BQ86YN6 1023 aaKnown RBP35.03■■■■□ 3.2
PDZRN4-202ENST00000402685 HRCP23327 699 aa34.99■■■■□ 3.19
PDZRN4-202ENST00000402685 PCGF6Q9BYE7 350 aa34.98■■■■□ 3.19
PDZRN4-202ENST00000402685 MYO15BQ96JP2 1530 aa34.25■■■■□ 3.07
PDZRN4-202ENST00000402685 CHIC1Q5VXU3 224 aa34.19■■■■□ 3.06
PDZRN4-202ENST00000402685 DCAF8L2P0C7V8 631 aa34.02■■■■□ 3.04
PDZRN4-202ENST00000402685 LOC105371045A0A1W2PR82 267 aa33.96■■■■□ 3.03
PDZRN4-202ENST00000402685 EHMT2Q96KQ7 1210 aa33.46■■■□□ 2.95
PDZRN4-202ENST00000402685 SCAF1Q9H7N4 1312 aaKnown RBP33.3■■■□□ 2.92
PDZRN4-202ENST00000402685 TRIM26Q12899 539 aaPredicted RBP33.25■■■□□ 2.91
PDZRN4-202ENST00000402685 PELP1Q8IZL8 1130 aaKnown RBP33.13■■■□□ 2.89
PDZRN4-202ENST00000402685 FAM9AQ8IZU1 332 aaPredicted RBP33.06■■■□□ 2.88
PDZRN4-202ENST00000402685 DCAF1Q9Y4B6 1507 aa32.87■■■□□ 2.85
PDZRN4-202ENST00000402685 ZEB1P37275 1124 aaPredicted RBP32.66■■■□□ 2.82
PDZRN4-202ENST00000402685 ZCCHC6Q5VYS8 1495 aaKnown RBP32.65■■■□□ 2.82
PDZRN4-202ENST00000402685 NEUROD1Q13562 356 aa32.54■■■□□ 2.8
PDZRN4-202ENST00000402685 TTBK1Q5TCY1 1321 aaPredicted RBP32.5■■■□□ 2.79
PDZRN4-202ENST00000402685 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.48■■■□□ 2.79
PDZRN4-202ENST00000402685 GTF3C3Q9Y5Q9 886 aa32.42■■■□□ 2.78
PDZRN4-202ENST00000402685 TRIM41Q8WV44 630 aa32.42■■■□□ 2.78
PDZRN4-202ENST00000402685 ACIN1Q9UKV3 1341 aaKnown RBP32.35■■■□□ 2.77
PDZRN4-202ENST00000402685 CCDC180Q9P1Z9 1646 aa32.33■■■□□ 2.77
PDZRN4-202ENST00000402685 CCER1Q8TC90 406 aaPredicted RBP32.29■■■□□ 2.76
PDZRN4-202ENST00000402685 YTHDC1Q96MU7 727 aaKnown RBP32.19■■■□□ 2.74
PDZRN4-202ENST00000402685 DIEXFQ68CQ4 756 aaKnown RBP32.06■■■□□ 2.72
PDZRN4-202ENST00000402685 CENPBP07199 599 aaPredicted RBP31.98■■■□□ 2.71
PDZRN4-202ENST00000402685 MYT1Q01538 1121 aa31.57■■■□□ 2.64
PDZRN4-202ENST00000402685 MIER1Q8N108 512 aa31.34■■■□□ 2.61
PDZRN4-202ENST00000402685 RSF1Q96T23 1441 aaPredicted RBP31.33■■■□□ 2.61
PDZRN4-202ENST00000402685 ZNF316A6NFI3 1004 aaPredicted RBP31.27■■■□□ 2.6
PDZRN4-202ENST00000402685 HNRNPUL2Q1KMD3 747 aaKnown RBP31.2■■■□□ 2.59
PDZRN4-202ENST00000402685 RB1CC1Q8TDY2 1594 aa31.19■■■□□ 2.58
PDZRN4-202ENST00000402685 RANGAP1P46060 587 aaPredicted RBP31.01■■■□□ 2.56
PDZRN4-202ENST00000402685 UBTFP17480 764 aaKnown RBP31■■■□□ 2.55
PDZRN4-202ENST00000402685 SCRIBQ14160 1630 aa30.99■■■□□ 2.55
PDZRN4-202ENST00000402685 ABCC9O60706 1549 aa30.93■■■□□ 2.54
PDZRN4-202ENST00000402685 BCANQ96GW7 911 aa30.73■■■□□ 2.51
PDZRN4-202ENST00000402685 CECR2Q9BXF3 1484 aa30.7■■■□□ 2.51
PDZRN4-202ENST00000402685 SUPT16HQ9Y5B9 1047 aaKnown RBP30.63■■■□□ 2.49
PDZRN4-202ENST00000402685 CEP162Q5TB80 1403 aa30.6■■■□□ 2.49
PDZRN4-202ENST00000402685 TSHZ2Q9NRE2 1034 aa30.47■■■□□ 2.47
PDZRN4-202ENST00000402685 SOGA1O94964 1423 aa30.45■■■□□ 2.47
PDZRN4-202ENST00000402685 MROH2BQ7Z745 1585 aa30.43■■■□□ 2.46
PDZRN4-202ENST00000402685 CCDC88BA6NC98 1476 aa30.41■■■□□ 2.46
PDZRN4-202ENST00000402685 BCL11AQ9H165 835 aa30.4■■■□□ 2.46
PDZRN4-202ENST00000402685 ABCC8Q09428 1581 aa30.39■■■□□ 2.46
PDZRN4-202ENST00000402685 CSRNP3Q8WYN3 585 aa30.38■■■□□ 2.45
PDZRN4-202ENST00000402685 KCNH8Q96L42 1107 aa30.37■■■□□ 2.45
PDZRN4-202ENST00000402685 APLP2Q06481 763 aa30.37■■■□□ 2.45
PDZRN4-202ENST00000402685 ANP32EQ9BTT0 268 aa30.36■■■□□ 2.45
PDZRN4-202ENST00000402685 RUSC2Q8N2Y8 1516 aa30.29■■■□□ 2.44
PDZRN4-202ENST00000402685 WIZO95785 1651 aa30.28■■■□□ 2.44
PDZRN4-202ENST00000402685 ITGAEP38570 1179 aa30.25■■■□□ 2.43
PDZRN4-202ENST00000402685 WRNQ14191 1432 aaPredicted RBP eCLIP30.2■■■□□ 2.42
PDZRN4-202ENST00000402685 TNIKQ9UKE5 1360 aa30.15■■■□□ 2.42
PDZRN4-202ENST00000402685 FKBP8Q14318 412 aa30.15■■■□□ 2.42
PDZRN4-202ENST00000402685 HIRIP3Q9BW71 556 aaPredicted RBP29.98■■■□□ 2.39
PDZRN4-202ENST00000402685 TRIM52Q96A61 297 aa29.93■■■□□ 2.38
PDZRN4-202ENST00000402685 DDX10Q13206 875 aaKnown RBP29.89■■■□□ 2.37
PDZRN4-202ENST00000402685 CLIP1P30622 1438 aa29.84■■■□□ 2.37
PDZRN4-202ENST00000402685 RBM19Q9Y4C8 960 aaKnown RBP29.83■■■□□ 2.37
PDZRN4-202ENST00000402685 PABPN1Q86U42 306 aaKnown RBP eCLIP29.8■■■□□ 2.36
PDZRN4-202ENST00000402685 GOLGA3Q08378 1498 aa29.78■■■□□ 2.36
PDZRN4-202ENST00000402685 NEFLP07196 543 aa29.77■■■□□ 2.36
PDZRN4-202ENST00000402685 IRX6P78412 446 aaPredicted RBP29.75■■■□□ 2.35
PDZRN4-202ENST00000402685 KANK4Q5T7N3 995 aaPredicted RBP29.74■■■□□ 2.35
PDZRN4-202ENST00000402685 DHX57Q6P158 1386 aaKnown RBP29.74■■■□□ 2.35
PDZRN4-202ENST00000402685 CLSPNQ9HAW4 1339 aa29.73■■■□□ 2.35
PDZRN4-202ENST00000402685 BAZ1AQ9NRL2 1556 aaPredicted RBP29.59■■■□□ 2.33
PDZRN4-202ENST00000402685 ERICH6Q7L0X2 663 aa29.58■■■□□ 2.33
PDZRN4-202ENST00000402685 SIN3AQ96ST3 1273 aa29.57■■■□□ 2.32
PDZRN4-202ENST00000402685 VPS8Q8N3P4 1428 aa29.55■■■□□ 2.32
PDZRN4-202ENST00000402685 EIF4G1Q04637 1599 aaKnown RBP29.55■■■□□ 2.32
PDZRN4-202ENST00000402685 MSH5O43196 834 aa29.55■■■□□ 2.32
PDZRN4-202ENST00000402685 EEA1Q15075 1411 aa29.47■■■□□ 2.31
PDZRN4-202ENST00000402685 RAPGEF2Q9Y4G8 1499 aa29.46■■■□□ 2.31
PDZRN4-202ENST00000402685 ATP1B4Q9UN42 357 aaPredicted RBP29.42■■■□□ 2.3
PDZRN4-202ENST00000402685 CEP164Q9UPV0 1460 aa29.41■■■□□ 2.3
PDZRN4-202ENST00000402685 SMARCA2P51531 1590 aa29.37■■■□□ 2.29
PDZRN4-202ENST00000402685 FAM50AQ14320 339 aaKnown RBP29.33■■■□□ 2.29
PDZRN4-202ENST00000402685 NACADO15069 1562 aa29.33■■■□□ 2.29
PDZRN4-202ENST00000402685 TOP2AP11388 1531 aaKnown RBP29.33■■■□□ 2.28
PDZRN4-202ENST00000402685 ANP32CO43423 234 aa29.3■■■□□ 2.28
PDZRN4-202ENST00000402685 HNRNPUQ00839 825 aaKnown RBP eCLIP29.25■■■□□ 2.27
PDZRN4-202ENST00000402685 CNGB1Q14028 1251 aaPredicted RBP29.25■■■□□ 2.27
PDZRN4-202ENST00000402685 KIF21BO75037 1637 aa29.22■■■□□ 2.27
PDZRN4-202ENST00000402685 NBR1Q14596 966 aa29.22■■■□□ 2.27
PDZRN4-202ENST00000402685 CDK11AQ9UQ88 783 aaPredicted RBP29.22■■■□□ 2.27
PDZRN4-202ENST00000402685 RAB3GAP2Q9H2M9 1393 aa29.17■■■□□ 2.26
PDZRN4-202ENST00000402685 SENP3-EIF4A1A0A087X0R7 540 aa29.15■■■□□ 2.26
PDZRN4-202ENST00000402685 P3H3Q8IVL6 736 aa29.12■■■□□ 2.25
PDZRN4-202ENST00000402685 CCNB3Q8WWL7 1395 aa29.11■■■□□ 2.25
PDZRN4-202ENST00000402685 SYNJ1O43426 1573 aa29.1■■■□□ 2.25
PDZRN4-202ENST00000402685 PPP1R15AO75807 674 aaPredicted RBP29.09■■■□□ 2.25
PDZRN4-202ENST00000402685 DEKP35659 375 aaKnown RBP29.05■■■□□ 2.24
PDZRN4-202ENST00000402685 SMARCA4P51532 1647 aa29.05■■■□□ 2.24
PDZRN4-202ENST00000402685 B4GALNT3Q6L9W6 998 aa29.04■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms