RNA–Protein interactions for RNA: ENST00000637736.1

CACNA1A-246, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 8,340 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-246ENST00000637736 DCAF8L2P0C7V8 631 aa32.16■■■□□ 2.74
CACNA1A-246ENST00000637736 PELP1Q8IZL8 1130 aaKnown RBP30.93■■■□□ 2.54
CACNA1A-246ENST00000637736 EHMT2Q96KQ7 1210 aa30.13■■■□□ 2.41
CACNA1A-246ENST00000637736 SUPT5HO00267 1087 aaKnown RBP30.1■■■□□ 2.41
CACNA1A-246ENST00000637736 ERICH6Q7L0X2 663 aa29.9■■■□□ 2.38
CACNA1A-246ENST00000637736 APLP2Q06481 763 aa29.74■■■□□ 2.35
CACNA1A-246ENST00000637736 FAM9AQ8IZU1 332 aaPredicted RBP29.72■■■□□ 2.35
CACNA1A-246ENST00000637736 CCER1Q8TC90 406 aaPredicted RBP29.56■■■□□ 2.32
CACNA1A-246ENST00000637736 SHROOM4Q9ULL8 1493 aa29.36■■■□□ 2.29
CACNA1A-246ENST00000637736 NISCHQ9Y2I1 1504 aa29.26■■■□□ 2.27
CACNA1A-246ENST00000637736 TTBK1Q5TCY1 1321 aaPredicted RBP29.14■■■□□ 2.26
CACNA1A-246ENST00000637736 CENPBP07199 599 aaPredicted RBP28.89■■■□□ 2.22
CACNA1A-246ENST00000637736 MYT1Q01538 1121 aa28.8■■■□□ 2.2
CACNA1A-246ENST00000637736 ATP1B4Q9UN42 357 aaPredicted RBP28.78■■■□□ 2.2
CACNA1A-246ENST00000637736 PCGF6Q9BYE7 350 aa28.77■■■□□ 2.2
CACNA1A-246ENST00000637736 RANGAP1P46060 587 aaPredicted RBP28.73■■■□□ 2.19
CACNA1A-246ENST00000637736 NEFLP07196 543 aa28.72■■■□□ 2.19
CACNA1A-246ENST00000637736 ZEB1P37275 1124 aaPredicted RBP28.52■■■□□ 2.16
CACNA1A-246ENST00000637736 DAXXQ9UER7 740 aaPredicted RBP28.51■■■□□ 2.15
CACNA1A-246ENST00000637736 YTHDC1Q96MU7 727 aaKnown RBP28.32■■■□□ 2.12
CACNA1A-246ENST00000637736 MYT1LQ9UL68 1186 aa28.06■■■□□ 2.08
CACNA1A-246ENST00000637736 TRIM41Q8WV44 630 aa28.04■■■□□ 2.08
CACNA1A-246ENST00000637736 UBTFP17480 764 aaKnown RBP28.01■■■□□ 2.07
CACNA1A-246ENST00000637736 POLR3GLQ9BT43 218 aa27.95■■■□□ 2.07
CACNA1A-246ENST00000637736 CHIC1Q5VXU3 224 aa27.75■■■□□ 2.03
CACNA1A-246ENST00000637736 SLC4A1APQ9BWU0 796 aaKnown RBP27.75■■■□□ 2.03
CACNA1A-246ENST00000637736 ZNF316A6NFI3 1004 aaPredicted RBP27.71■■■□□ 2.03
CACNA1A-246ENST00000637736 CNGB1Q14028 1251 aaPredicted RBP27.68■■■□□ 2.02
CACNA1A-246ENST00000637736 CLSPNQ9HAW4 1339 aa27.61■■■□□ 2.01
CACNA1A-246ENST00000637736 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.52■■■□□ 2
CACNA1A-246ENST00000637736 HNRNPUL2Q1KMD3 747 aaKnown RBP27.52■■■□□ 2
CACNA1A-246ENST00000637736 RTL5Q5HYW3 569 aaPredicted RBP27.5■■□□□ 1.99
CACNA1A-246ENST00000637736 PPARGC1BQ86YN6 1023 aaKnown RBP27.41■■□□□ 1.98
CACNA1A-246ENST00000637736 ITGAEP38570 1179 aa27.39■■□□□ 1.98
CACNA1A-246ENST00000637736 TRIM26Q12899 539 aaPredicted RBP27.16■■□□□ 1.94
CACNA1A-246ENST00000637736 ZBTB47Q9UFB7 747 aaPredicted RBP27.11■■□□□ 1.93
CACNA1A-246ENST00000637736 SLC24A1O60721 1099 aa27.07■■□□□ 1.92
CACNA1A-246ENST00000637736 BCL11AQ9H165 835 aa26.98■■□□□ 1.91
CACNA1A-246ENST00000637736 HRCP23327 699 aa26.76■■□□□ 1.87
CACNA1A-246ENST00000637736 CANXP27824 592 aaKnown RBP26.64■■□□□ 1.86
CACNA1A-246ENST00000637736 BCANQ96GW7 911 aa26.56■■□□□ 1.84
CACNA1A-246ENST00000637736 CDK11AQ9UQ88 783 aaPredicted RBP26.52■■□□□ 1.84
CACNA1A-246ENST00000637736 TRIM52Q96A61 297 aa26.52■■□□□ 1.84
CACNA1A-246ENST00000637736 NEFMP07197 916 aa26.51■■□□□ 1.83
CACNA1A-246ENST00000637736 FAM50AQ14320 339 aaKnown RBP26.5■■□□□ 1.83
CACNA1A-246ENST00000637736 DIEXFQ68CQ4 756 aaKnown RBP26.45■■□□□ 1.83
CACNA1A-246ENST00000637736 ANP32BQ92688 251 aaKnown RBP26.41■■□□□ 1.82
CACNA1A-246ENST00000637736 ZNF326Q5BKZ1 582 aaKnown RBP26.4■■□□□ 1.82
CACNA1A-246ENST00000637736 NEUROD1Q13562 356 aa26.37■■□□□ 1.81
CACNA1A-246ENST00000637736 ANP32CO43423 234 aa26.31■■□□□ 1.8
CACNA1A-246ENST00000637736 EIF5BO60841 1220 aaKnown RBP26.31■■□□□ 1.8
CACNA1A-246ENST00000637736 HSP90AA1P07900 732 aaKnown RBP26.26■■□□□ 1.79
CACNA1A-246ENST00000637736 ANP32AP39687 249 aaKnown RBP26.21■■□□□ 1.79
CACNA1A-246ENST00000637736 LOC105371045A0A1W2PR82 267 aa26.19■■□□□ 1.78
CACNA1A-246ENST00000637736 NPM2Q86SE8 214 aaKnown RBP26.16■■□□□ 1.78
CACNA1A-246ENST00000637736 CDK11BP21127 795 aaKnown RBP26.12■■□□□ 1.77
CACNA1A-246ENST00000637736 GLIPR1L2Q4G1C9 344 aa26.05■■□□□ 1.76
CACNA1A-246ENST00000637736 UPF2Q9HAU5 1272 aaKnown RBP25.94■■□□□ 1.74
CACNA1A-246ENST00000637736 GTF3C3Q9Y5Q9 886 aa25.93■■□□□ 1.74
CACNA1A-246ENST00000637736 FBLN2P98095 1184 aa25.92■■□□□ 1.74
CACNA1A-246ENST00000637736 PLPPR3Q6T4P5 718 aa25.9■■□□□ 1.74
CACNA1A-246ENST00000637736 ESF1Q9H501 851 aaKnown RBP25.87■■□□□ 1.73
CACNA1A-246ENST00000637736 ARXQ96QS3 562 aa25.81■■□□□ 1.72
CACNA1A-246ENST00000637736 STAG3Q9UJ98 1225 aa25.76■■□□□ 1.71
CACNA1A-246ENST00000637736 A0A0G2JS52 829 aa25.74■■□□□ 1.71
CACNA1A-246ENST00000637736 SCAF1Q9H7N4 1312 aaKnown RBP25.69■■□□□ 1.7
CACNA1A-246ENST00000637736 CHGAP10645 457 aaKnown RBP25.61■■□□□ 1.69
CACNA1A-246ENST00000637736 TULP1O00294 542 aaPredicted RBP25.61■■□□□ 1.69
CACNA1A-246ENST00000637736 ARID3CA6NKF2 412 aa25.54■■□□□ 1.68
CACNA1A-246ENST00000637736 NBR1Q14596 966 aa25.54■■□□□ 1.68
CACNA1A-246ENST00000637736 ABCC9O60706 1549 aa25.53■■□□□ 1.68
CACNA1A-246ENST00000637736 ZNF777Q9ULD5 760 aaPredicted RBP25.53■■□□□ 1.68
CACNA1A-246ENST00000637736 PABPN1Q86U42 306 aaKnown RBP eCLIP25.51■■□□□ 1.67
CACNA1A-246ENST00000637736 SALL2Q9Y467 1007 aaPredicted RBP25.5■■□□□ 1.67
CACNA1A-246ENST00000637736 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.46■■□□□ 1.67
CACNA1A-246ENST00000637736 TONSLQ96HA7 1378 aa25.44■■□□□ 1.66
CACNA1A-246ENST00000637736 MYH16Q9H6N6 1097 aa25.4■■□□□ 1.66
CACNA1A-246ENST00000637736 FKBP8Q14318 412 aa25.4■■□□□ 1.66
CACNA1A-246ENST00000637736 NCLP19338 710 aaKnown RBP25.36■■□□□ 1.65
CACNA1A-246ENST00000637736 NPM1P06748 294 aaKnown RBP eCLIP25.35■■□□□ 1.65
CACNA1A-246ENST00000637736 TNNT2P45379 298 aaPredicted RBP25.35■■□□□ 1.65
CACNA1A-246ENST00000637736 P3H3Q8IVL6 736 aa25.35■■□□□ 1.65
CACNA1A-246ENST00000637736 PLEKHG5O94827 1062 aa25.34■■□□□ 1.65
CACNA1A-246ENST00000637736 FAM9BQ8IZU0 186 aa25.33■■□□□ 1.65
CACNA1A-246ENST00000637736 ZBTB7CA1YPR0 619 aa25.33■■□□□ 1.64
CACNA1A-246ENST00000637736 TRIM44Q96DX7 344 aaPredicted RBP25.33■■□□□ 1.64
CACNA1A-246ENST00000637736 ZRSR1Q15695 479 aaKnown RBP25.31■■□□□ 1.64
CACNA1A-246ENST00000637736 NCBP3Q53F19 620 aaKnown RBP25.3■■□□□ 1.64
CACNA1A-246ENST00000637736 WDR43Q15061 677 aaKnown RBP eCLIP25.28■■□□□ 1.64
CACNA1A-246ENST00000637736 HNRNPUQ00839 825 aaKnown RBP eCLIP25.28■■□□□ 1.64
CACNA1A-246ENST00000637736 CCDC136Q96JN2 1154 aa25.27■■□□□ 1.64
CACNA1A-246ENST00000637736 TMC1Q8TDI8 760 aa25.24■■□□□ 1.63
CACNA1A-246ENST00000637736 ACIN1Q9UKV3 1341 aaKnown RBP25.22■■□□□ 1.63
CACNA1A-246ENST00000637736 C14orf37Q86TY3 774 aa25.2■■□□□ 1.63
CACNA1A-246ENST00000637736 TPRNQ4KMQ1 711 aa25.2■■□□□ 1.62
CACNA1A-246ENST00000637736 DNTTIP2Q5QJE6 756 aaKnown RBP25.19■■□□□ 1.62
CACNA1A-246ENST00000637736 PTMAP06454 111 aaKnown RBP25.16■■□□□ 1.62
CACNA1A-246ENST00000637736 GOLGA6L22H0YM25 854 aa25.12■■□□□ 1.61
CACNA1A-246ENST00000637736 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.09■■□□□ 1.61
CACNA1A-246ENST00000637736 BECN1Q14457 450 aa25.09■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms