Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC13.63□□□□□ -0.23
TRIM48Q8IWZ4 AC004899.2-201ENST00000622993 3860 ntBASIC13.63□□□□□ -0.23
TRIM48Q8IWZ4 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC13.63□□□□□ -0.23
TRIM48Q8IWZ4 PAAF1-201ENST00000310571 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRIM48Q8IWZ4 ANTXR2-203ENST00000403729 8273 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRIM48Q8IWZ4 DUOX2-201ENST00000389039 6533 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRIM48Q8IWZ4 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRIM48Q8IWZ4 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TRIM48Q8IWZ4 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC13.63□□□□□ -0.23
TRIM48Q8IWZ4 DDC-213ENST00000617822 1809 ntTSL 3 BASIC13.63□□□□□ -0.23
TRIM48Q8IWZ4 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TRIM48Q8IWZ4 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC13.63□□□□□ -0.23
TRIM48Q8IWZ4 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRIM48Q8IWZ4 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC13.63□□□□□ -0.23
TRIM48Q8IWZ4 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC13.63□□□□□ -0.23
TRIM48Q8IWZ4 IGF1-203ENST00000392904 761 ntTSL 5 BASIC13.63□□□□□ -0.23
TRIM48Q8IWZ4 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC13.63□□□□□ -0.23
TRIM48Q8IWZ4 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC13.63□□□□□ -0.23
TRIM48Q8IWZ4 AC092573.1-201ENST00000433054 884 ntBASIC13.63□□□□□ -0.23
TRIM48Q8IWZ4 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC13.63□□□□□ -0.23
TRIM48Q8IWZ4 CSNK1G2P1-201ENST00000442675 955 ntBASIC13.63□□□□□ -0.23
TRIM48Q8IWZ4 AC104784.1-201ENST00000473096 294 ntBASIC13.63□□□□□ -0.23
TRIM48Q8IWZ4 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC13.63□□□□□ -0.23
TRIM48Q8IWZ4 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC13.63□□□□□ -0.23
TRIM48Q8IWZ4 SOCS2-AS1-204ENST00000551626 618 ntTSL 4 BASIC13.63□□□□□ -0.23
TRIM48Q8IWZ4 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRIM48Q8IWZ4 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TRIM48Q8IWZ4 AC140113.1-201ENST00000603467 169 ntBASIC13.63□□□□□ -0.23
TRIM48Q8IWZ4 SNX1-214ENST00000625244 324 ntTSL 5 BASIC13.63□□□□□ -0.23
TRIM48Q8IWZ4 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
TRIM48Q8IWZ4 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TRIM48Q8IWZ4 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
TRIM48Q8IWZ4 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TRIM48Q8IWZ4 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC13.63□□□□□ -0.23
TRIM48Q8IWZ4 C17orf80-202ENST00000268942 3449 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRIM48Q8IWZ4 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
TRIM48Q8IWZ4 DDR1-225ENST00000376568 3894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRIM48Q8IWZ4 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRIM48Q8IWZ4 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC13.63□□□□□ -0.23
TRIM48Q8IWZ4 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC13.63□□□□□ -0.23
TRIM48Q8IWZ4 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRIM48Q8IWZ4 ANKRD36B-204ENST00000438709 6067 ntTSL 5 BASIC13.63□□□□□ -0.23
TRIM48Q8IWZ4 SARS-202ENST00000369923 1882 ntTSL 5 BASIC13.63□□□□□ -0.23
TRIM48Q8IWZ4 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC13.63□□□□□ -0.23
TRIM48Q8IWZ4 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
TRIM48Q8IWZ4 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TRIM48Q8IWZ4 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRIM48Q8IWZ4 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRIM48Q8IWZ4 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TRIM48Q8IWZ4 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
TRIM48Q8IWZ4 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TRIM48Q8IWZ4 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRIM48Q8IWZ4 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
TRIM48Q8IWZ4 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRIM48Q8IWZ4 ROBO1-201ENST00000436010 7501 ntTSL 5 BASIC13.62□□□□□ -0.23
TRIM48Q8IWZ4 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRIM48Q8IWZ4 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TRIM48Q8IWZ4 LSS-211ENST00000522411 2523 ntTSL 2 BASIC13.62□□□□□ -0.23
TRIM48Q8IWZ4 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TRIM48Q8IWZ4 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRIM48Q8IWZ4 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRIM48Q8IWZ4 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRIM48Q8IWZ4 CRISP2-201ENST00000339139 1382 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRIM48Q8IWZ4 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
TRIM48Q8IWZ4 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRIM48Q8IWZ4 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC13.62□□□□□ -0.23
TRIM48Q8IWZ4 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
TRIM48Q8IWZ4 TLR6-202ENST00000436693 5880 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRIM48Q8IWZ4 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRIM48Q8IWZ4 CNTNAP1-201ENST00000264638 5276 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRIM48Q8IWZ4 DERL3-202ENST00000318109 860 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRIM48Q8IWZ4 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TRIM48Q8IWZ4 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TRIM48Q8IWZ4 CELP-201ENST00000411440 1249 ntTSL 5 BASIC13.62□□□□□ -0.23
TRIM48Q8IWZ4 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
TRIM48Q8IWZ4 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC13.62□□□□□ -0.23
TRIM48Q8IWZ4 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC13.62□□□□□ -0.23
TRIM48Q8IWZ4 AC253536.3-201ENST00000444093 558 ntTSL 3 BASIC13.62□□□□□ -0.23
TRIM48Q8IWZ4 AC004837.1-201ENST00000446267 564 ntBASIC13.62□□□□□ -0.23
TRIM48Q8IWZ4 BUD31-205ENST00000456893 512 ntTSL 5 BASIC13.62□□□□□ -0.23
TRIM48Q8IWZ4 RN7SKP155-201ENST00000516031 288 ntBASIC13.62□□□□□ -0.23
TRIM48Q8IWZ4 RNA5SP406-201ENST00000516106 112 ntBASIC13.62□□□□□ -0.23
TRIM48Q8IWZ4 AP000911.2-201ENST00000534330 502 ntBASIC13.62□□□□□ -0.23
TRIM48Q8IWZ4 USP31-203ENST00000567975 2142 ntTSL 2 BASIC13.62□□□□□ -0.23
TRIM48Q8IWZ4 SNORD3B-1-201ENST00000577988 758 ntBASIC13.62□□□□□ -0.23
TRIM48Q8IWZ4 RN7SL357P-201ENST00000581065 298 ntBASIC13.62□□□□□ -0.23
TRIM48Q8IWZ4 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC13.62□□□□□ -0.23
TRIM48Q8IWZ4 AC007250.1-201ENST00000608934 338 ntBASIC13.62□□□□□ -0.23
TRIM48Q8IWZ4 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
TRIM48Q8IWZ4 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRIM48Q8IWZ4 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC13.62□□□□□ -0.23
TRIM48Q8IWZ4 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRIM48Q8IWZ4 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC13.62□□□□□ -0.23
TRIM48Q8IWZ4 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC13.62□□□□□ -0.23
TRIM48Q8IWZ4 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRIM48Q8IWZ4 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC13.62□□□□□ -0.23
TRIM48Q8IWZ4 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TRIM48Q8IWZ4 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
TRIM48Q8IWZ4 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRIM48Q8IWZ4 RBL1-202ENST00000373664 5684 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms