RNA–Protein interactions for RNA: ENST00000417439.5

LTF-202, Transcript of lactotransferrin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LTF, Length 2,130 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTF-202ENST00000417439 NISCHQ9Y2I1 1504 aa33.79■■■■□ 3
LTF-202ENST00000417439 CCDC180Q9P1Z9 1646 aa29.96■■■□□ 2.39
LTF-202ENST00000417439 ABCC9O60706 1549 aa29.59■■■□□ 2.33
LTF-202ENST00000417439 DCAF8L2P0C7V8 631 aa28.49■■■□□ 2.15
LTF-202ENST00000417439 RB1CC1Q8TDY2 1594 aa28.27■■■□□ 2.12
LTF-202ENST00000417439 NACADO15069 1562 aa28.2■■■□□ 2.1
LTF-202ENST00000417439 ZCCHC6Q5VYS8 1495 aaKnown RBP28.11■■■□□ 2.09
LTF-202ENST00000417439 MYO15BQ96JP2 1530 aa27.93■■■□□ 2.06
LTF-202ENST00000417439 DCAF1Q9Y4B6 1507 aa27.82■■■□□ 2.04
LTF-202ENST00000417439 UNC13AQ9UPW8 1703 aa27.74■■■□□ 2.03
LTF-202ENST00000417439 PABPN1Q86U42 306 aaKnown RBP eCLIP27.71■■■□□ 2.03
LTF-202ENST00000417439 SCRIBQ14160 1630 aa27.51■■□□□ 1.99
LTF-202ENST00000417439 BICRAQ9NZM4 1560 aa27.5■■□□□ 1.99
LTF-202ENST00000417439 DNAJC5BQ9UF47 199 aa27.29■■□□□ 1.96
LTF-202ENST00000417439 SHROOM4Q9ULL8 1493 aa26.96■■□□□ 1.91
LTF-202ENST00000417439 EIF4G1Q04637 1599 aaKnown RBP26.76■■□□□ 1.87
LTF-202ENST00000417439 CC2D2AQ9P2K1 1620 aa26.69■■□□□ 1.86
LTF-202ENST00000417439 CECR2Q9BXF3 1484 aa26.52■■□□□ 1.84
LTF-202ENST00000417439 SMARCA4P51532 1647 aa26.23■■□□□ 1.79
LTF-202ENST00000417439 BAZ1AQ9NRL2 1556 aaPredicted RBP26.15■■□□□ 1.78
LTF-202ENST00000417439 MROH2BQ7Z745 1585 aa26.11■■□□□ 1.77
LTF-202ENST00000417439 ATAD2BQ9ULI0 1458 aa26.11■■□□□ 1.77
LTF-202ENST00000417439 NCAPD3P42695 1498 aa26.05■■□□□ 1.76
LTF-202ENST00000417439 SMARCA2P51531 1590 aa26.01■■□□□ 1.75
LTF-202ENST00000417439 PEG3Q9GZU2 1588 aa25.89■■□□□ 1.74
LTF-202ENST00000417439 BAZ1BQ9UIG0 1483 aaKnown RBP25.89■■□□□ 1.74
LTF-202ENST00000417439 HMGXB3Q12766 1538 aa25.88■■□□□ 1.73
LTF-202ENST00000417439 WIZO95785 1651 aa25.85■■□□□ 1.73
LTF-202ENST00000417439 RSF1Q96T23 1441 aaPredicted RBP25.77■■□□□ 1.72
LTF-202ENST00000417439 NESP48681 1621 aa25.61■■□□□ 1.69
LTF-202ENST00000417439 TOP2AP11388 1531 aaKnown RBP25.46■■□□□ 1.67
LTF-202ENST00000417439 ERCC6Q03468 1493 aa25.44■■□□□ 1.66
LTF-202ENST00000417439 LAMC3Q9Y6N6 1575 aa25.35■■□□□ 1.65
LTF-202ENST00000417439 CADPSQ9ULU8 1353 aa25.33■■□□□ 1.65
LTF-202ENST00000417439 KIF21AQ7Z4S6 1674 aa25.24■■□□□ 1.63
LTF-202ENST00000417439 SUPT5HO00267 1087 aaKnown RBP25.24■■□□□ 1.63
LTF-202ENST00000417439 CCDC88BA6NC98 1476 aa25.24■■□□□ 1.63
LTF-202ENST00000417439 PDS5BQ9NTI5 1447 aa25.2■■□□□ 1.63
LTF-202ENST00000417439 CFTRP13569 1480 aa25.15■■□□□ 1.62
LTF-202ENST00000417439 THOC2Q8NI27 1593 aaKnown RBP25.11■■□□□ 1.61
LTF-202ENST00000417439 CUX2O14529 1486 aa25.07■■□□□ 1.6
LTF-202ENST00000417439 FANCD2Q9BXW9 1451 aa25.06■■□□□ 1.6
LTF-202ENST00000417439 CEP164Q9UPV0 1460 aa25.01■■□□□ 1.59
LTF-202ENST00000417439 MRC2Q9UBG0 1479 aa24.97■■□□□ 1.59
LTF-202ENST00000417439 PRDM2Q13029 1718 aa24.91■■□□□ 1.58
LTF-202ENST00000417439 WDR62O43379 1518 aa24.88■■□□□ 1.57
LTF-202ENST00000417439 URB2Q14146 1524 aaKnown RBP24.84■■□□□ 1.57
LTF-202ENST00000417439 TOPBP1Q92547 1522 aa24.66■■□□□ 1.54
LTF-202ENST00000417439 DNMBPQ6XZF7 1577 aa24.58■■□□□ 1.52
LTF-202ENST00000417439 ABCC8Q09428 1581 aa24.52■■□□□ 1.52
LTF-202ENST00000417439 DNAJC5Q9H3Z4 198 aa24.49■■□□□ 1.51
LTF-202ENST00000417439 ZNF608Q9ULD9 1512 aaPredicted RBP24.49■■□□□ 1.51
LTF-202ENST00000417439 CUX1P39880 1505 aa24.48■■□□□ 1.51
LTF-202ENST00000417439 POLA1P09884 1462 aaPredicted RBP24.45■■□□□ 1.51
LTF-202ENST00000417439 IFT140Q96RY7 1462 aa24.45■■□□□ 1.51
LTF-202ENST00000417439 RAD54L2Q9Y4B4 1467 aa24.42■■□□□ 1.5
LTF-202ENST00000417439 FGD5Q6ZNL6 1462 aa24.4■■□□□ 1.5
LTF-202ENST00000417439 TARBP1Q13395 1621 aaKnown RBP24.38■■□□□ 1.49
LTF-202ENST00000417439 SOGA1O94964 1423 aa24.36■■□□□ 1.49
LTF-202ENST00000417439 AQRO60306 1485 aaKnown RBP eCLIP24.35■■□□□ 1.49
LTF-202ENST00000417439 EIF4G3O43432 1585 aaKnown RBP24.31■■□□□ 1.48
LTF-202ENST00000417439 TDRD9Q8NDG6 1382 aaKnown RBP24.3■■□□□ 1.48
LTF-202ENST00000417439 WRNQ14191 1432 aaPredicted RBP eCLIP24.28■■□□□ 1.48
LTF-202ENST00000417439 SYNJ1O43426 1573 aa24.26■■□□□ 1.47
LTF-202ENST00000417439 TOP2BQ02880 1626 aa24.19■■□□□ 1.46
LTF-202ENST00000417439 BIVM-ERCC5R4GMW8 1640 aa24.18■■□□□ 1.46
LTF-202ENST00000417439 WDR97A6NE52 1622 aa24.14■■□□□ 1.46
LTF-202ENST00000417439 OSCARQ8IYS5 282 aa24.14■■□□□ 1.45
LTF-202ENST00000417439 FBLN2P98095 1184 aa24.13■■□□□ 1.45
LTF-202ENST00000417439 ABCA10Q8WWZ4 1543 aa24.09■■□□□ 1.45
LTF-202ENST00000417439 GAPVD1Q14C86 1478 aa24.06■■□□□ 1.44
LTF-202ENST00000417439 SNAPC4Q5SXM2 1469 aa24.06■■□□□ 1.44
LTF-202ENST00000417439 CHD1O14646 1710 aa24.04■■□□□ 1.44
LTF-202ENST00000417439 GRIN2BQ13224 1484 aa24.03■■□□□ 1.44
LTF-202ENST00000417439 ABCA5Q8WWZ7 1642 aa24.01■■□□□ 1.43
LTF-202ENST00000417439 PBRM1Q86U86 1689 aa24.01■■□□□ 1.43
LTF-202ENST00000417439 CHMP7Q8WUX9 453 aaPredicted RBP23.96■■□□□ 1.43
LTF-202ENST00000417439 MAGI1Q96QZ7 1491 aaPredicted RBP23.94■■□□□ 1.42
LTF-202ENST00000417439 SYNJ2O15056 1496 aa23.88■■□□□ 1.41
LTF-202ENST00000417439 TRIM41Q8WV44 630 aa23.8■■□□□ 1.4
LTF-202ENST00000417439 ADAMTS12P58397 1594 aa23.79■■□□□ 1.4
LTF-202ENST00000417439 ERICH3Q5RHP9 1530 aa23.78■■□□□ 1.4
LTF-202ENST00000417439 RIMBP3CA6NJZ7 1639 aa23.76■■□□□ 1.39
LTF-202ENST00000417439 RIMBP3BA6NNM3 1639 aa23.76■■□□□ 1.39
LTF-202ENST00000417439 RIMBP3Q9UFD9 1639 aa23.76■■□□□ 1.39
LTF-202ENST00000417439 KIF27Q86VH2 1401 aa23.74■■□□□ 1.39
LTF-202ENST00000417439 GRIN2AQ12879 1464 aa23.74■■□□□ 1.39
LTF-202ENST00000417439 ARHGEF11O15085 1522 aa23.74■■□□□ 1.39
LTF-202ENST00000417439 FHAD1B1AJZ9 1412 aa23.74■■□□□ 1.39
LTF-202ENST00000417439 CLASP1Q7Z460 1538 aa23.71■■□□□ 1.39
LTF-202ENST00000417439 IGF1RP08069 1367 aa23.71■■□□□ 1.39
LTF-202ENST00000417439 RUSC2Q8N2Y8 1516 aa23.68■■□□□ 1.38
LTF-202ENST00000417439 CEP170Q5SW79 1584 aa23.66■■□□□ 1.38
LTF-202ENST00000417439 CYB5RLQ6IPT4 315 aa23.63■■□□□ 1.37
LTF-202ENST00000417439 NUP160Q12769 1436 aa23.61■■□□□ 1.37
LTF-202ENST00000417439 ARAP1Q96P48 1450 aa23.56■■□□□ 1.36
LTF-202ENST00000417439 CARMIL1Q5VZK9 1371 aa23.55■■□□□ 1.36
LTF-202ENST00000417439 CUL7Q14999 1698 aa23.54■■□□□ 1.36
LTF-202ENST00000417439 ERCC6L2Q5T890 1561 aa23.52■■□□□ 1.36
LTF-202ENST00000417439 JPH4Q96JJ6 628 aa23.45■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms