RNA–Protein interactions for RNA: ENST00000440935.1

AC004869.1-201, humanhuman

TSL 4 BASIC

Gene AC004869.1, Length 540 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004869.1-201ENST00000440935 NISCHQ9Y2I1 1504 aa34.64■■■■□ 3.14
AC004869.1-201ENST00000440935 CCDC180Q9P1Z9 1646 aa31.14■■■□□ 2.58
AC004869.1-201ENST00000440935 ABCC9O60706 1549 aa30.85■■■□□ 2.53
AC004869.1-201ENST00000440935 RB1CC1Q8TDY2 1594 aa29.52■■■□□ 2.32
AC004869.1-201ENST00000440935 NACADO15069 1562 aa29.36■■■□□ 2.29
AC004869.1-201ENST00000440935 DCAF8L2P0C7V8 631 aa29.06■■■□□ 2.24
AC004869.1-201ENST00000440935 MYO15BQ96JP2 1530 aa29.03■■■□□ 2.24
AC004869.1-201ENST00000440935 UNC13AQ9UPW8 1703 aa28.94■■■□□ 2.22
AC004869.1-201ENST00000440935 DNAJC5BQ9UF47 199 aa28.8■■■□□ 2.2
AC004869.1-201ENST00000440935 ZCCHC6Q5VYS8 1495 aaKnown RBP28.73■■■□□ 2.19
AC004869.1-201ENST00000440935 PABPN1Q86U42 306 aaKnown RBP eCLIP28.69■■■□□ 2.18
AC004869.1-201ENST00000440935 DCAF1Q9Y4B6 1507 aa28.69■■■□□ 2.18
AC004869.1-201ENST00000440935 BICRAQ9NZM4 1560 aa28.64■■■□□ 2.18
AC004869.1-201ENST00000440935 SHROOM4Q9ULL8 1493 aa28.32■■■□□ 2.12
AC004869.1-201ENST00000440935 SCRIBQ14160 1630 aa28.25■■■□□ 2.11
AC004869.1-201ENST00000440935 CC2D2AQ9P2K1 1620 aa27.96■■■□□ 2.07
AC004869.1-201ENST00000440935 EIF4G1Q04637 1599 aaKnown RBP27.92■■■□□ 2.06
AC004869.1-201ENST00000440935 CECR2Q9BXF3 1484 aa27.8■■■□□ 2.04
AC004869.1-201ENST00000440935 NCAPD3P42695 1498 aa27.06■■□□□ 1.92
AC004869.1-201ENST00000440935 SMARCA4P51532 1647 aa27.02■■□□□ 1.92
AC004869.1-201ENST00000440935 ATAD2BQ9ULI0 1458 aa26.98■■□□□ 1.91
AC004869.1-201ENST00000440935 SMARCA2P51531 1590 aa26.96■■□□□ 1.91
AC004869.1-201ENST00000440935 BAZ1AQ9NRL2 1556 aaPredicted RBP26.91■■□□□ 1.9
AC004869.1-201ENST00000440935 HMGXB3Q12766 1538 aa26.9■■□□□ 1.9
AC004869.1-201ENST00000440935 PEG3Q9GZU2 1588 aa26.8■■□□□ 1.88
AC004869.1-201ENST00000440935 BAZ1BQ9UIG0 1483 aaKnown RBP26.72■■□□□ 1.87
AC004869.1-201ENST00000440935 MROH2BQ7Z745 1585 aa26.67■■□□□ 1.86
AC004869.1-201ENST00000440935 ERCC6Q03468 1493 aa26.64■■□□□ 1.86
AC004869.1-201ENST00000440935 CUX2O14529 1486 aa26.62■■□□□ 1.85
AC004869.1-201ENST00000440935 NESP48681 1621 aa26.54■■□□□ 1.84
AC004869.1-201ENST00000440935 LAMC3Q9Y6N6 1575 aa26.49■■□□□ 1.83
AC004869.1-201ENST00000440935 DNAJC5Q9H3Z4 198 aa26.41■■□□□ 1.82
AC004869.1-201ENST00000440935 WIZO95785 1651 aa26.39■■□□□ 1.82
AC004869.1-201ENST00000440935 THOC2Q8NI27 1593 aaKnown RBP26.33■■□□□ 1.81
AC004869.1-201ENST00000440935 KIF21AQ7Z4S6 1674 aa26.31■■□□□ 1.8
AC004869.1-201ENST00000440935 PDS5BQ9NTI5 1447 aa26.27■■□□□ 1.8
AC004869.1-201ENST00000440935 CADPSQ9ULU8 1353 aa26.22■■□□□ 1.79
AC004869.1-201ENST00000440935 RSF1Q96T23 1441 aaPredicted RBP26.14■■□□□ 1.77
AC004869.1-201ENST00000440935 TOP2AP11388 1531 aaKnown RBP26.06■■□□□ 1.76
AC004869.1-201ENST00000440935 MRC2Q9UBG0 1479 aa26.02■■□□□ 1.76
AC004869.1-201ENST00000440935 WDR62O43379 1518 aa25.98■■□□□ 1.75
AC004869.1-201ENST00000440935 CFTRP13569 1480 aa25.97■■□□□ 1.75
AC004869.1-201ENST00000440935 CEP164Q9UPV0 1460 aa25.95■■□□□ 1.74
AC004869.1-201ENST00000440935 FANCD2Q9BXW9 1451 aa25.91■■□□□ 1.74
AC004869.1-201ENST00000440935 PRDM2Q13029 1718 aa25.88■■□□□ 1.73
AC004869.1-201ENST00000440935 CCDC88BA6NC98 1476 aa25.73■■□□□ 1.71
AC004869.1-201ENST00000440935 URB2Q14146 1524 aaKnown RBP25.69■■□□□ 1.7
AC004869.1-201ENST00000440935 ABCC8Q09428 1581 aa25.47■■□□□ 1.67
AC004869.1-201ENST00000440935 TOPBP1Q92547 1522 aa25.46■■□□□ 1.67
AC004869.1-201ENST00000440935 IFT140Q96RY7 1462 aa25.43■■□□□ 1.66
AC004869.1-201ENST00000440935 DNMBPQ6XZF7 1577 aa25.4■■□□□ 1.66
AC004869.1-201ENST00000440935 OSCARQ8IYS5 282 aa25.37■■□□□ 1.65
AC004869.1-201ENST00000440935 ZNF608Q9ULD9 1512 aaPredicted RBP25.33■■□□□ 1.65
AC004869.1-201ENST00000440935 EIF4G3O43432 1585 aaKnown RBP25.27■■□□□ 1.64
AC004869.1-201ENST00000440935 TARBP1Q13395 1621 aaKnown RBP25.26■■□□□ 1.63
AC004869.1-201ENST00000440935 TRIM41Q8WV44 630 aa25.23■■□□□ 1.63
AC004869.1-201ENST00000440935 POLA1P09884 1462 aaPredicted RBP25.19■■□□□ 1.62
AC004869.1-201ENST00000440935 AQRO60306 1485 aaKnown RBP eCLIP25.12■■□□□ 1.61
AC004869.1-201ENST00000440935 CHD1O14646 1710 aa25.1■■□□□ 1.61
AC004869.1-201ENST00000440935 RIMBP3CA6NJZ7 1639 aa25.08■■□□□ 1.61
AC004869.1-201ENST00000440935 RIMBP3BA6NNM3 1639 aa25.08■■□□□ 1.61
AC004869.1-201ENST00000440935 RIMBP3Q9UFD9 1639 aa25.08■■□□□ 1.61
AC004869.1-201ENST00000440935 SOGA1O94964 1423 aa25.08■■□□□ 1.61
AC004869.1-201ENST00000440935 WDR97A6NE52 1622 aa25.08■■□□□ 1.6
AC004869.1-201ENST00000440935 RAD54L2Q9Y4B4 1467 aa25.06■■□□□ 1.6
AC004869.1-201ENST00000440935 FGD5Q6ZNL6 1462 aa25.04■■□□□ 1.6
AC004869.1-201ENST00000440935 CUX1P39880 1505 aa25.04■■□□□ 1.6
AC004869.1-201ENST00000440935 SUPT5HO00267 1087 aaKnown RBP24.99■■□□□ 1.59
AC004869.1-201ENST00000440935 ARHGEF11O15085 1522 aa24.98■■□□□ 1.59
AC004869.1-201ENST00000440935 TDRD9Q8NDG6 1382 aaKnown RBP24.95■■□□□ 1.59
AC004869.1-201ENST00000440935 FBLN2P98095 1184 aa24.89■■□□□ 1.58
AC004869.1-201ENST00000440935 SNAPC4Q5SXM2 1469 aa24.89■■□□□ 1.57
AC004869.1-201ENST00000440935 MAGI1Q96QZ7 1491 aaPredicted RBP24.88■■□□□ 1.57
AC004869.1-201ENST00000440935 GRIN2BQ13224 1484 aa24.86■■□□□ 1.57
AC004869.1-201ENST00000440935 PBRM1Q86U86 1689 aa24.85■■□□□ 1.57
AC004869.1-201ENST00000440935 ABCA10Q8WWZ4 1543 aa24.81■■□□□ 1.56
AC004869.1-201ENST00000440935 SYNJ1O43426 1573 aa24.79■■□□□ 1.56
AC004869.1-201ENST00000440935 ABCA5Q8WWZ7 1642 aa24.79■■□□□ 1.56
AC004869.1-201ENST00000440935 GAPVD1Q14C86 1478 aa24.78■■□□□ 1.56
AC004869.1-201ENST00000440935 CLASP1Q7Z460 1538 aa24.77■■□□□ 1.56
AC004869.1-201ENST00000440935 BIVM-ERCC5R4GMW8 1640 aa24.77■■□□□ 1.56
AC004869.1-201ENST00000440935 CHMP7Q8WUX9 453 aaPredicted RBP24.77■■□□□ 1.56
AC004869.1-201ENST00000440935 SYNJ2O15056 1496 aa24.77■■□□□ 1.56
AC004869.1-201ENST00000440935 TOP2BQ02880 1626 aa24.73■■□□□ 1.55
AC004869.1-201ENST00000440935 ARAP1Q96P48 1450 aa24.73■■□□□ 1.55
AC004869.1-201ENST00000440935 CYB5RLQ6IPT4 315 aa24.73■■□□□ 1.55
AC004869.1-201ENST00000440935 WRNQ14191 1432 aaPredicted RBP eCLIP24.69■■□□□ 1.54
AC004869.1-201ENST00000440935 ADAMTS12P58397 1594 aa24.56■■□□□ 1.52
AC004869.1-201ENST00000440935 GRIN2AQ12879 1464 aa24.54■■□□□ 1.52
AC004869.1-201ENST00000440935 ERICH3Q5RHP9 1530 aa24.51■■□□□ 1.51
AC004869.1-201ENST00000440935 FHAD1B1AJZ9 1412 aa24.48■■□□□ 1.51
AC004869.1-201ENST00000440935 CEP170Q5SW79 1584 aa24.46■■□□□ 1.51
AC004869.1-201ENST00000440935 NUP160Q12769 1436 aa24.45■■□□□ 1.51
AC004869.1-201ENST00000440935 TRHP20396 242 aaPredicted RBP24.41■■□□□ 1.5
AC004869.1-201ENST00000440935 SHROOM2Q13796 1616 aa24.39■■□□□ 1.5
AC004869.1-201ENST00000440935 ERCC6L2Q5T890 1561 aa24.35■■□□□ 1.49
AC004869.1-201ENST00000440935 RUSC2Q8N2Y8 1516 aa24.22■■□□□ 1.47
AC004869.1-201ENST00000440935 CUL7Q14999 1698 aa24.21■■□□□ 1.47
AC004869.1-201ENST00000440935 KIF27Q86VH2 1401 aa24.2■■□□□ 1.46
AC004869.1-201ENST00000440935 JPH4Q96JJ6 628 aa24.18■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms