RNA–Protein interactions for RNA: ENST00000300456.4

SLC27A4-201, Transcript of solute carrier family 27 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC27A4, Length 3,028 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC27A4-201ENST00000300456 NISCHQ9Y2I1 1504 aa27.97■■■□□ 2.07
SLC27A4-201ENST00000300456 PELP1Q8IZL8 1130 aaKnown RBP24.32■■□□□ 1.48
SLC27A4-201ENST00000300456 SHROOM4Q9ULL8 1493 aa24.19■■□□□ 1.46
SLC27A4-201ENST00000300456 DCAF8L2P0C7V8 631 aa23.78■■□□□ 1.4
SLC27A4-201ENST00000300456 MYT1Q01538 1121 aa23.76■■□□□ 1.39
SLC27A4-201ENST00000300456 SUPT5HO00267 1087 aaKnown RBP23.65■■□□□ 1.38
SLC27A4-201ENST00000300456 CCDC180Q9P1Z9 1646 aa23.65■■□□□ 1.38
SLC27A4-201ENST00000300456 ZCCHC6Q5VYS8 1495 aaKnown RBP23.6■■□□□ 1.37
SLC27A4-201ENST00000300456 HRCP23327 699 aa23.08■■□□□ 1.28
SLC27A4-201ENST00000300456 PPARGC1BQ86YN6 1023 aaKnown RBP22.81■■□□□ 1.24
SLC27A4-201ENST00000300456 DCAF1Q9Y4B6 1507 aa22.75■■□□□ 1.23
SLC27A4-201ENST00000300456 SCAF1Q9H7N4 1312 aaKnown RBP22.72■■□□□ 1.23
SLC27A4-201ENST00000300456 CHIC1Q5VXU3 224 aa22.71■■□□□ 1.23
SLC27A4-201ENST00000300456 TTBK1Q5TCY1 1321 aaPredicted RBP22.63■■□□□ 1.21
SLC27A4-201ENST00000300456 MYO15BQ96JP2 1530 aa22.57■■□□□ 1.2
SLC27A4-201ENST00000300456 PRKCSHP14314 528 aaPredicted RBP22.54■■□□□ 1.2
SLC27A4-201ENST00000300456 SCRIBQ14160 1630 aa22.48■■□□□ 1.19
SLC27A4-201ENST00000300456 ABCC9O60706 1549 aa22.48■■□□□ 1.19
SLC27A4-201ENST00000300456 BCL11AQ9H165 835 aa22.29■■□□□ 1.16
SLC27A4-201ENST00000300456 LOC105371045A0A1W2PR82 267 aa22.2■■□□□ 1.14
SLC27A4-201ENST00000300456 PCGF6Q9BYE7 350 aa22.18■■□□□ 1.14
SLC27A4-201ENST00000300456 RSF1Q96T23 1441 aaPredicted RBP22.16■■□□□ 1.14
SLC27A4-201ENST00000300456 FAM9AQ8IZU1 332 aaPredicted RBP22.06■■□□□ 1.12
SLC27A4-201ENST00000300456 NACADO15069 1562 aa22■■□□□ 1.11
SLC27A4-201ENST00000300456 CECR2Q9BXF3 1484 aa21.98■■□□□ 1.11
SLC27A4-201ENST00000300456 EHMT2Q96KQ7 1210 aa21.93■■□□□ 1.1
SLC27A4-201ENST00000300456 RB1CC1Q8TDY2 1594 aa21.93■■□□□ 1.1
SLC27A4-201ENST00000300456 TRIM41Q8WV44 630 aa21.92■■□□□ 1.1
SLC27A4-201ENST00000300456 ERICH6Q7L0X2 663 aa21.87■■□□□ 1.09
SLC27A4-201ENST00000300456 MROH2BQ7Z745 1585 aa21.83■■□□□ 1.08
SLC27A4-201ENST00000300456 CENPBP07199 599 aaPredicted RBP21.75■■□□□ 1.07
SLC27A4-201ENST00000300456 GTF3C3Q9Y5Q9 886 aa21.73■■□□□ 1.07
SLC27A4-201ENST00000300456 WIZO95785 1651 aa21.69■■□□□ 1.06
SLC27A4-201ENST00000300456 ACIN1Q9UKV3 1341 aaKnown RBP21.68■■□□□ 1.06
SLC27A4-201ENST00000300456 NEUROD1Q13562 356 aa21.63■■□□□ 1.05
SLC27A4-201ENST00000300456 APLP2Q06481 763 aa21.62■■□□□ 1.05
SLC27A4-201ENST00000300456 PABPN1Q86U42 306 aaKnown RBP eCLIP21.6■■□□□ 1.05
SLC27A4-201ENST00000300456 BAZ1AQ9NRL2 1556 aaPredicted RBP21.48■■□□□ 1.03
SLC27A4-201ENST00000300456 TRIM26Q12899 539 aaPredicted RBP21.45■■□□□ 1.02
SLC27A4-201ENST00000300456 UNC13AQ9UPW8 1703 aa21.34■■□□□ 1.01
SLC27A4-201ENST00000300456 SMARCA4P51532 1647 aa21.32■■□□□ 1
SLC27A4-201ENST00000300456 CCDC88BA6NC98 1476 aa21.27■■□□□ 1
SLC27A4-201ENST00000300456 ABCC8Q09428 1581 aa21.25■□□□□ 0.99
SLC27A4-201ENST00000300456 TOP2AP11388 1531 aaKnown RBP21.25■□□□□ 0.99
SLC27A4-201ENST00000300456 ANP32EQ9BTT0 268 aa21.25■□□□□ 0.99
SLC27A4-201ENST00000300456 ZEB1P37275 1124 aaPredicted RBP21.19■□□□□ 0.98
SLC27A4-201ENST00000300456 CSRNP3Q8WYN3 585 aa21.17■□□□□ 0.98
SLC27A4-201ENST00000300456 SMARCA2P51531 1590 aa21.16■□□□□ 0.98
SLC27A4-201ENST00000300456 EIF4G1Q04637 1599 aaKnown RBP21.14■□□□□ 0.98
SLC27A4-201ENST00000300456 BICRAQ9NZM4 1560 aa21.14■□□□□ 0.97
SLC27A4-201ENST00000300456 SLC24A1O60721 1099 aa21.12■□□□□ 0.97
SLC27A4-201ENST00000300456 SOGA1O94964 1423 aa21.04■□□□□ 0.96
SLC27A4-201ENST00000300456 UBTFP17480 764 aaKnown RBP20.97■□□□□ 0.95
SLC27A4-201ENST00000300456 RUSC2Q8N2Y8 1516 aa20.95■□□□□ 0.94
SLC27A4-201ENST00000300456 ATAD2BQ9ULI0 1458 aa20.87■□□□□ 0.93
SLC27A4-201ENST00000300456 WRNQ14191 1432 aaPredicted RBP eCLIP20.86■□□□□ 0.93
SLC27A4-201ENST00000300456 BAZ1BQ9UIG0 1483 aaKnown RBP20.86■□□□□ 0.93
SLC27A4-201ENST00000300456 ANO8Q9HCE9 1232 aaPredicted RBP20.84■□□□□ 0.93
SLC27A4-201ENST00000300456 CEP162Q5TB80 1403 aa20.84■□□□□ 0.93
SLC27A4-201ENST00000300456 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.83■□□□□ 0.92
SLC27A4-201ENST00000300456 RANGAP1P46060 587 aaPredicted RBP20.83■□□□□ 0.92
SLC27A4-201ENST00000300456 PEG3Q9GZU2 1588 aa20.77■□□□□ 0.92
SLC27A4-201ENST00000300456 YTHDC1Q96MU7 727 aaKnown RBP20.76■□□□□ 0.91
SLC27A4-201ENST00000300456 CCER1Q8TC90 406 aaPredicted RBP20.72■□□□□ 0.91
SLC27A4-201ENST00000300456 TNIKQ9UKE5 1360 aa20.72■□□□□ 0.91
SLC27A4-201ENST00000300456 SYNJ1O43426 1573 aa20.71■□□□□ 0.91
SLC27A4-201ENST00000300456 EEA1Q15075 1411 aa20.69■□□□□ 0.9
SLC27A4-201ENST00000300456 EIF5BO60841 1220 aaKnown RBP20.68■□□□□ 0.9
SLC27A4-201ENST00000300456 GOLGA3Q08378 1498 aa20.65■□□□□ 0.9
SLC27A4-201ENST00000300456 DIEXFQ68CQ4 756 aaKnown RBP20.64■□□□□ 0.89
SLC27A4-201ENST00000300456 CEP164Q9UPV0 1460 aa20.53■□□□□ 0.88
SLC27A4-201ENST00000300456 TSHZ2Q9NRE2 1034 aa20.5■□□□□ 0.87
SLC27A4-201ENST00000300456 RAPGEF2Q9Y4G8 1499 aa20.5■□□□□ 0.87
SLC27A4-201ENST00000300456 CLIP1P30622 1438 aa20.49■□□□□ 0.87
SLC27A4-201ENST00000300456 CCDC136Q96JN2 1154 aa20.48■□□□□ 0.87
SLC27A4-201ENST00000300456 HNRNPUL2Q1KMD3 747 aaKnown RBP20.47■□□□□ 0.87
SLC27A4-201ENST00000300456 PLEKHG5O94827 1062 aa20.44■□□□□ 0.86
SLC27A4-201ENST00000300456 NCAPD3P42695 1498 aa20.41■□□□□ 0.86
SLC27A4-201ENST00000300456 UBE2Q2Q8WVN8 375 aa20.4■□□□□ 0.86
SLC27A4-201ENST00000300456 SALL2Q9Y467 1007 aaPredicted RBP20.39■□□□□ 0.85
SLC27A4-201ENST00000300456 KIF21BO75037 1637 aa20.38■□□□□ 0.85
SLC27A4-201ENST00000300456 TOP2BQ02880 1626 aa20.37■□□□□ 0.85
SLC27A4-201ENST00000300456 DAXXQ9UER7 740 aaPredicted RBP20.35■□□□□ 0.85
SLC27A4-201ENST00000300456 HMGXB3Q12766 1538 aa20.34■□□□□ 0.85
SLC27A4-201ENST00000300456 CUX1P39880 1505 aa20.3■□□□□ 0.84
SLC27A4-201ENST00000300456 VPS8Q8N3P4 1428 aa20.3■□□□□ 0.84
SLC27A4-201ENST00000300456 CFTRP13569 1480 aa20.24■□□□□ 0.83
SLC27A4-201ENST00000300456 BIVM-ERCC5R4GMW8 1640 aa20.24■□□□□ 0.83
SLC27A4-201ENST00000300456 KIF27Q86VH2 1401 aa20.21■□□□□ 0.83
SLC27A4-201ENST00000300456 SUPT16HQ9Y5B9 1047 aaKnown RBP20.21■□□□□ 0.83
SLC27A4-201ENST00000300456 PRXQ9BXM0 1461 aa20.18■□□□□ 0.82
SLC27A4-201ENST00000300456 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.15■□□□□ 0.82
SLC27A4-201ENST00000300456 KANK4Q5T7N3 995 aaPredicted RBP20.15■□□□□ 0.82
SLC27A4-201ENST00000300456 CUX2O14529 1486 aa20.12■□□□□ 0.81
SLC27A4-201ENST00000300456 PKNOX2Q96KN3 472 aa20.12■□□□□ 0.81
SLC27A4-201ENST00000300456 CADPSQ9ULU8 1353 aa20.12■□□□□ 0.81
SLC27A4-201ENST00000300456 PODXL2Q9NZ53 605 aa20.11■□□□□ 0.81
SLC27A4-201ENST00000300456 ARAP1Q96P48 1450 aa20.1■□□□□ 0.81
SLC27A4-201ENST00000300456 ERICH3Q5RHP9 1530 aa20.09■□□□□ 0.81
SLC27A4-201ENST00000300456 ITGAEP38570 1179 aa20.08■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms