RNA–Protein interactions for RNA: ENST00000398397.3

TMPRSS3-202, Transcript of transmembrane serine protease 3, humanhuman

TSL 1 (best) BASIC

Gene TMPRSS3, Length 1,342 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMPRSS3-202ENST00000398397 NISCHQ9Y2I1 1504 aa34.61■■■■□ 3.13
TMPRSS3-202ENST00000398397 CCDC180Q9P1Z9 1646 aa30.96■■■□□ 2.55
TMPRSS3-202ENST00000398397 ABCC9O60706 1549 aa30.19■■■□□ 2.42
TMPRSS3-202ENST00000398397 RB1CC1Q8TDY2 1594 aa29.09■■■□□ 2.25
TMPRSS3-202ENST00000398397 NACADO15069 1562 aa29.06■■■□□ 2.24
TMPRSS3-202ENST00000398397 MYO15BQ96JP2 1530 aa28.93■■■□□ 2.22
TMPRSS3-202ENST00000398397 ZCCHC6Q5VYS8 1495 aaKnown RBP28.85■■■□□ 2.21
TMPRSS3-202ENST00000398397 DCAF1Q9Y4B6 1507 aa28.73■■■□□ 2.19
TMPRSS3-202ENST00000398397 DCAF8L2P0C7V8 631 aa28.55■■■□□ 2.16
TMPRSS3-202ENST00000398397 UNC13AQ9UPW8 1703 aa28.52■■■□□ 2.16
TMPRSS3-202ENST00000398397 BICRAQ9NZM4 1560 aa28.3■■■□□ 2.12
TMPRSS3-202ENST00000398397 PABPN1Q86U42 306 aaKnown RBP eCLIP28.07■■■□□ 2.08
TMPRSS3-202ENST00000398397 SCRIBQ14160 1630 aa28.06■■■□□ 2.08
TMPRSS3-202ENST00000398397 SHROOM4Q9ULL8 1493 aa28.05■■■□□ 2.08
TMPRSS3-202ENST00000398397 DNAJC5BQ9UF47 199 aa27.83■■■□□ 2.05
TMPRSS3-202ENST00000398397 EIF4G1Q04637 1599 aaKnown RBP27.51■■□□□ 1.99
TMPRSS3-202ENST00000398397 CC2D2AQ9P2K1 1620 aa27.41■■□□□ 1.98
TMPRSS3-202ENST00000398397 CECR2Q9BXF3 1484 aa27.18■■□□□ 1.94
TMPRSS3-202ENST00000398397 SMARCA4P51532 1647 aa26.92■■□□□ 1.9
TMPRSS3-202ENST00000398397 BAZ1AQ9NRL2 1556 aaPredicted RBP26.83■■□□□ 1.89
TMPRSS3-202ENST00000398397 NCAPD3P42695 1498 aa26.79■■□□□ 1.88
TMPRSS3-202ENST00000398397 ATAD2BQ9ULI0 1458 aa26.76■■□□□ 1.87
TMPRSS3-202ENST00000398397 SMARCA2P51531 1590 aa26.74■■□□□ 1.87
TMPRSS3-202ENST00000398397 PEG3Q9GZU2 1588 aa26.74■■□□□ 1.87
TMPRSS3-202ENST00000398397 HMGXB3Q12766 1538 aa26.72■■□□□ 1.87
TMPRSS3-202ENST00000398397 MROH2BQ7Z745 1585 aa26.64■■□□□ 1.86
TMPRSS3-202ENST00000398397 BAZ1BQ9UIG0 1483 aaKnown RBP26.49■■□□□ 1.83
TMPRSS3-202ENST00000398397 WIZO95785 1651 aa26.34■■□□□ 1.81
TMPRSS3-202ENST00000398397 RSF1Q96T23 1441 aaPredicted RBP26.26■■□□□ 1.79
TMPRSS3-202ENST00000398397 LAMC3Q9Y6N6 1575 aa26.13■■□□□ 1.77
TMPRSS3-202ENST00000398397 NESP48681 1621 aa26.12■■□□□ 1.77
TMPRSS3-202ENST00000398397 TOP2AP11388 1531 aaKnown RBP26.1■■□□□ 1.77
TMPRSS3-202ENST00000398397 ERCC6Q03468 1493 aa26■■□□□ 1.75
TMPRSS3-202ENST00000398397 CADPSQ9ULU8 1353 aa25.93■■□□□ 1.74
TMPRSS3-202ENST00000398397 CUX2O14529 1486 aa25.93■■□□□ 1.74
TMPRSS3-202ENST00000398397 THOC2Q8NI27 1593 aaKnown RBP25.91■■□□□ 1.74
TMPRSS3-202ENST00000398397 KIF21AQ7Z4S6 1674 aa25.89■■□□□ 1.74
TMPRSS3-202ENST00000398397 PDS5BQ9NTI5 1447 aa25.85■■□□□ 1.73
TMPRSS3-202ENST00000398397 CFTRP13569 1480 aa25.82■■□□□ 1.72
TMPRSS3-202ENST00000398397 PRDM2Q13029 1718 aa25.71■■□□□ 1.71
TMPRSS3-202ENST00000398397 CCDC88BA6NC98 1476 aa25.71■■□□□ 1.71
TMPRSS3-202ENST00000398397 WDR62O43379 1518 aa25.66■■□□□ 1.7
TMPRSS3-202ENST00000398397 MRC2Q9UBG0 1479 aa25.65■■□□□ 1.7
TMPRSS3-202ENST00000398397 FANCD2Q9BXW9 1451 aa25.64■■□□□ 1.7
TMPRSS3-202ENST00000398397 CEP164Q9UPV0 1460 aa25.64■■□□□ 1.69
TMPRSS3-202ENST00000398397 URB2Q14146 1524 aaKnown RBP25.45■■□□□ 1.66
TMPRSS3-202ENST00000398397 TOPBP1Q92547 1522 aa25.25■■□□□ 1.63
TMPRSS3-202ENST00000398397 DNMBPQ6XZF7 1577 aa25.25■■□□□ 1.63
TMPRSS3-202ENST00000398397 ABCC8Q09428 1581 aa25.22■■□□□ 1.63
TMPRSS3-202ENST00000398397 SUPT5HO00267 1087 aaKnown RBP25.19■■□□□ 1.62
TMPRSS3-202ENST00000398397 DNAJC5Q9H3Z4 198 aa25.18■■□□□ 1.62
TMPRSS3-202ENST00000398397 IFT140Q96RY7 1462 aa25.11■■□□□ 1.61
TMPRSS3-202ENST00000398397 TARBP1Q13395 1621 aaKnown RBP25.07■■□□□ 1.6
TMPRSS3-202ENST00000398397 POLA1P09884 1462 aaPredicted RBP25.04■■□□□ 1.6
TMPRSS3-202ENST00000398397 CUX1P39880 1505 aa25.02■■□□□ 1.6
TMPRSS3-202ENST00000398397 ZNF608Q9ULD9 1512 aaPredicted RBP25■■□□□ 1.59
TMPRSS3-202ENST00000398397 EIF4G3O43432 1585 aaKnown RBP24.98■■□□□ 1.59
TMPRSS3-202ENST00000398397 FGD5Q6ZNL6 1462 aa24.92■■□□□ 1.58
TMPRSS3-202ENST00000398397 WDR97A6NE52 1622 aa24.9■■□□□ 1.58
TMPRSS3-202ENST00000398397 RAD54L2Q9Y4B4 1467 aa24.85■■□□□ 1.57
TMPRSS3-202ENST00000398397 BIVM-ERCC5R4GMW8 1640 aa24.83■■□□□ 1.57
TMPRSS3-202ENST00000398397 SOGA1O94964 1423 aa24.82■■□□□ 1.56
TMPRSS3-202ENST00000398397 TOP2BQ02880 1626 aa24.79■■□□□ 1.56
TMPRSS3-202ENST00000398397 AQRO60306 1485 aaKnown RBP eCLIP24.78■■□□□ 1.56
TMPRSS3-202ENST00000398397 SYNJ1O43426 1573 aa24.76■■□□□ 1.55
TMPRSS3-202ENST00000398397 WRNQ14191 1432 aaPredicted RBP eCLIP24.73■■□□□ 1.55
TMPRSS3-202ENST00000398397 ABCA10Q8WWZ4 1543 aa24.72■■□□□ 1.55
TMPRSS3-202ENST00000398397 ABCA5Q8WWZ7 1642 aa24.7■■□□□ 1.55
TMPRSS3-202ENST00000398397 TDRD9Q8NDG6 1382 aaKnown RBP24.67■■□□□ 1.54
TMPRSS3-202ENST00000398397 CHD1O14646 1710 aa24.67■■□□□ 1.54
TMPRSS3-202ENST00000398397 PBRM1Q86U86 1689 aa24.64■■□□□ 1.54
TMPRSS3-202ENST00000398397 OSCARQ8IYS5 282 aa24.61■■□□□ 1.53
TMPRSS3-202ENST00000398397 GRIN2BQ13224 1484 aa24.61■■□□□ 1.53
TMPRSS3-202ENST00000398397 MAGI1Q96QZ7 1491 aaPredicted RBP24.61■■□□□ 1.53
TMPRSS3-202ENST00000398397 SNAPC4Q5SXM2 1469 aa24.6■■□□□ 1.53
TMPRSS3-202ENST00000398397 GAPVD1Q14C86 1478 aa24.58■■□□□ 1.53
TMPRSS3-202ENST00000398397 SYNJ2O15056 1496 aa24.5■■□□□ 1.51
TMPRSS3-202ENST00000398397 CLASP1Q7Z460 1538 aa24.46■■□□□ 1.51
TMPRSS3-202ENST00000398397 ADAMTS12P58397 1594 aa24.45■■□□□ 1.5
TMPRSS3-202ENST00000398397 RIMBP3CA6NJZ7 1639 aa24.43■■□□□ 1.5
TMPRSS3-202ENST00000398397 RIMBP3BA6NNM3 1639 aa24.43■■□□□ 1.5
TMPRSS3-202ENST00000398397 RIMBP3Q9UFD9 1639 aa24.43■■□□□ 1.5
TMPRSS3-202ENST00000398397 ERICH3Q5RHP9 1530 aa24.43■■□□□ 1.5
TMPRSS3-202ENST00000398397 ARHGEF11O15085 1522 aa24.41■■□□□ 1.5
TMPRSS3-202ENST00000398397 GRIN2AQ12879 1464 aa24.33■■□□□ 1.49
TMPRSS3-202ENST00000398397 FBLN2P98095 1184 aa24.31■■□□□ 1.48
TMPRSS3-202ENST00000398397 CHMP7Q8WUX9 453 aaPredicted RBP24.3■■□□□ 1.48
TMPRSS3-202ENST00000398397 FHAD1B1AJZ9 1412 aa24.3■■□□□ 1.48
TMPRSS3-202ENST00000398397 NUP160Q12769 1436 aa24.27■■□□□ 1.48
TMPRSS3-202ENST00000398397 CEP170Q5SW79 1584 aa24.25■■□□□ 1.47
TMPRSS3-202ENST00000398397 ARAP1Q96P48 1450 aa24.21■■□□□ 1.47
TMPRSS3-202ENST00000398397 KIF27Q86VH2 1401 aa24.2■■□□□ 1.46
TMPRSS3-202ENST00000398397 CUL7Q14999 1698 aa24.19■■□□□ 1.46
TMPRSS3-202ENST00000398397 SHROOM2Q13796 1616 aa24.18■■□□□ 1.46
TMPRSS3-202ENST00000398397 IGF1RP08069 1367 aa24.13■■□□□ 1.45
TMPRSS3-202ENST00000398397 RUSC2Q8N2Y8 1516 aa24.12■■□□□ 1.45
TMPRSS3-202ENST00000398397 TRIM41Q8WV44 630 aa24.11■■□□□ 1.45
TMPRSS3-202ENST00000398397 ERCC6L2Q5T890 1561 aa24.03■■□□□ 1.44
TMPRSS3-202ENST00000398397 CYB5RLQ6IPT4 315 aa23.96■■□□□ 1.43
TMPRSS3-202ENST00000398397 KIAA0586Q9BVV6 1533 aa23.94■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms