RNA–Protein interactions for RNA: ENST00000496212.5

RAMP3-203, Transcript of receptor activity modifying protein 3, humanhuman

APPRIS ALT2 TSL 4 BASIC

Gene RAMP3, Length 543 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAMP3-203ENST00000496212 NISCHQ9Y2I1 1504 aa33.79■■■■□ 3
RAMP3-203ENST00000496212 CCDC180Q9P1Z9 1646 aa30.15■■■□□ 2.42
RAMP3-203ENST00000496212 ABCC9O60706 1549 aa29.35■■■□□ 2.29
RAMP3-203ENST00000496212 RB1CC1Q8TDY2 1594 aa28.27■■■□□ 2.12
RAMP3-203ENST00000496212 NACADO15069 1562 aa28.21■■■□□ 2.11
RAMP3-203ENST00000496212 ZCCHC6Q5VYS8 1495 aaKnown RBP28.21■■■□□ 2.11
RAMP3-203ENST00000496212 DCAF8L2P0C7V8 631 aa28.11■■■□□ 2.09
RAMP3-203ENST00000496212 MYO15BQ96JP2 1530 aa27.99■■■□□ 2.07
RAMP3-203ENST00000496212 DCAF1Q9Y4B6 1507 aa27.92■■■□□ 2.06
RAMP3-203ENST00000496212 UNC13AQ9UPW8 1703 aa27.84■■■□□ 2.05
RAMP3-203ENST00000496212 SCRIBQ14160 1630 aa27.54■■■□□ 2
RAMP3-203ENST00000496212 BICRAQ9NZM4 1560 aa27.43■■□□□ 1.98
RAMP3-203ENST00000496212 PABPN1Q86U42 306 aaKnown RBP eCLIP27.34■■□□□ 1.97
RAMP3-203ENST00000496212 SHROOM4Q9ULL8 1493 aa27.06■■□□□ 1.92
RAMP3-203ENST00000496212 DNAJC5BQ9UF47 199 aa26.74■■□□□ 1.87
RAMP3-203ENST00000496212 EIF4G1Q04637 1599 aaKnown RBP26.7■■□□□ 1.86
RAMP3-203ENST00000496212 CC2D2AQ9P2K1 1620 aa26.61■■□□□ 1.85
RAMP3-203ENST00000496212 CECR2Q9BXF3 1484 aa26.33■■□□□ 1.81
RAMP3-203ENST00000496212 SMARCA4P51532 1647 aa26.3■■□□□ 1.8
RAMP3-203ENST00000496212 BAZ1AQ9NRL2 1556 aaPredicted RBP26.21■■□□□ 1.79
RAMP3-203ENST00000496212 MROH2BQ7Z745 1585 aa26.08■■□□□ 1.77
RAMP3-203ENST00000496212 SMARCA2P51531 1590 aa26.04■■□□□ 1.76
RAMP3-203ENST00000496212 ATAD2BQ9ULI0 1458 aa26.03■■□□□ 1.76
RAMP3-203ENST00000496212 PEG3Q9GZU2 1588 aa25.98■■□□□ 1.75
RAMP3-203ENST00000496212 NCAPD3P42695 1498 aa25.95■■□□□ 1.74
RAMP3-203ENST00000496212 HMGXB3Q12766 1538 aa25.94■■□□□ 1.74
RAMP3-203ENST00000496212 WIZO95785 1651 aa25.89■■□□□ 1.73
RAMP3-203ENST00000496212 BAZ1BQ9UIG0 1483 aaKnown RBP25.86■■□□□ 1.73
RAMP3-203ENST00000496212 RSF1Q96T23 1441 aaPredicted RBP25.72■■□□□ 1.71
RAMP3-203ENST00000496212 TOP2AP11388 1531 aaKnown RBP25.56■■□□□ 1.68
RAMP3-203ENST00000496212 NESP48681 1621 aa25.43■■□□□ 1.66
RAMP3-203ENST00000496212 LAMC3Q9Y6N6 1575 aa25.36■■□□□ 1.65
RAMP3-203ENST00000496212 ERCC6Q03468 1493 aa25.29■■□□□ 1.64
RAMP3-203ENST00000496212 KIF21AQ7Z4S6 1674 aa25.27■■□□□ 1.64
RAMP3-203ENST00000496212 PRDM2Q13029 1718 aa25.2■■□□□ 1.62
RAMP3-203ENST00000496212 CADPSQ9ULU8 1353 aa25.18■■□□□ 1.62
RAMP3-203ENST00000496212 CCDC88BA6NC98 1476 aa25.18■■□□□ 1.62
RAMP3-203ENST00000496212 THOC2Q8NI27 1593 aaKnown RBP25.12■■□□□ 1.61
RAMP3-203ENST00000496212 SUPT5HO00267 1087 aaKnown RBP25.1■■□□□ 1.61
RAMP3-203ENST00000496212 CFTRP13569 1480 aa25.09■■□□□ 1.61
RAMP3-203ENST00000496212 PDS5BQ9NTI5 1447 aa25.09■■□□□ 1.61
RAMP3-203ENST00000496212 FANCD2Q9BXW9 1451 aa24.99■■□□□ 1.59
RAMP3-203ENST00000496212 CEP164Q9UPV0 1460 aa24.97■■□□□ 1.59
RAMP3-203ENST00000496212 CUX2O14529 1486 aa24.96■■□□□ 1.59
RAMP3-203ENST00000496212 MRC2Q9UBG0 1479 aa24.91■■□□□ 1.58
RAMP3-203ENST00000496212 WDR62O43379 1518 aa24.87■■□□□ 1.57
RAMP3-203ENST00000496212 URB2Q14146 1524 aaKnown RBP24.76■■□□□ 1.55
RAMP3-203ENST00000496212 DNMBPQ6XZF7 1577 aa24.63■■□□□ 1.53
RAMP3-203ENST00000496212 TOPBP1Q92547 1522 aa24.61■■□□□ 1.53
RAMP3-203ENST00000496212 ABCC8Q09428 1581 aa24.53■■□□□ 1.52
RAMP3-203ENST00000496212 CUX1P39880 1505 aa24.48■■□□□ 1.51
RAMP3-203ENST00000496212 POLA1P09884 1462 aaPredicted RBP24.4■■□□□ 1.5
RAMP3-203ENST00000496212 IFT140Q96RY7 1462 aa24.4■■□□□ 1.5
RAMP3-203ENST00000496212 TARBP1Q13395 1621 aaKnown RBP24.39■■□□□ 1.5
RAMP3-203ENST00000496212 FGD5Q6ZNL6 1462 aa24.38■■□□□ 1.49
RAMP3-203ENST00000496212 EIF4G3O43432 1585 aaKnown RBP24.35■■□□□ 1.49
RAMP3-203ENST00000496212 BIVM-ERCC5R4GMW8 1640 aa24.35■■□□□ 1.49
RAMP3-203ENST00000496212 SYNJ1O43426 1573 aa24.34■■□□□ 1.49
RAMP3-203ENST00000496212 ZNF608Q9ULD9 1512 aaPredicted RBP24.34■■□□□ 1.49
RAMP3-203ENST00000496212 WDR97A6NE52 1622 aa24.32■■□□□ 1.48
RAMP3-203ENST00000496212 TOP2BQ02880 1626 aa24.3■■□□□ 1.48
RAMP3-203ENST00000496212 RAD54L2Q9Y4B4 1467 aa24.29■■□□□ 1.48
RAMP3-203ENST00000496212 WRNQ14191 1432 aaPredicted RBP eCLIP24.27■■□□□ 1.48
RAMP3-203ENST00000496212 SOGA1O94964 1423 aa24.23■■□□□ 1.47
RAMP3-203ENST00000496212 AQRO60306 1485 aaKnown RBP eCLIP24.16■■□□□ 1.46
RAMP3-203ENST00000496212 PBRM1Q86U86 1689 aa24.15■■□□□ 1.46
RAMP3-203ENST00000496212 ABCA5Q8WWZ7 1642 aa24.12■■□□□ 1.45
RAMP3-203ENST00000496212 ABCA10Q8WWZ4 1543 aa24.1■■□□□ 1.45
RAMP3-203ENST00000496212 TDRD9Q8NDG6 1382 aaKnown RBP24.1■■□□□ 1.45
RAMP3-203ENST00000496212 CHD1O14646 1710 aa24.1■■□□□ 1.45
RAMP3-203ENST00000496212 SNAPC4Q5SXM2 1469 aa24■■□□□ 1.43
RAMP3-203ENST00000496212 GAPVD1Q14C86 1478 aa24■■□□□ 1.43
RAMP3-203ENST00000496212 DNAJC5Q9H3Z4 198 aa23.98■■□□□ 1.43
RAMP3-203ENST00000496212 GRIN2BQ13224 1484 aa23.98■■□□□ 1.43
RAMP3-203ENST00000496212 MAGI1Q96QZ7 1491 aaPredicted RBP23.93■■□□□ 1.42
RAMP3-203ENST00000496212 ADAMTS12P58397 1594 aa23.89■■□□□ 1.41
RAMP3-203ENST00000496212 SYNJ2O15056 1496 aa23.83■■□□□ 1.41
RAMP3-203ENST00000496212 ERICH3Q5RHP9 1530 aa23.83■■□□□ 1.41
RAMP3-203ENST00000496212 FBLN2P98095 1184 aa23.81■■□□□ 1.4
RAMP3-203ENST00000496212 OSCARQ8IYS5 282 aa23.8■■□□□ 1.4
RAMP3-203ENST00000496212 KIF27Q86VH2 1401 aa23.75■■□□□ 1.39
RAMP3-203ENST00000496212 CUL7Q14999 1698 aa23.72■■□□□ 1.39
RAMP3-203ENST00000496212 GRIN2AQ12879 1464 aa23.71■■□□□ 1.39
RAMP3-203ENST00000496212 CHMP7Q8WUX9 453 aaPredicted RBP23.71■■□□□ 1.39
RAMP3-203ENST00000496212 CLASP1Q7Z460 1538 aa23.7■■□□□ 1.38
RAMP3-203ENST00000496212 FHAD1B1AJZ9 1412 aa23.69■■□□□ 1.38
RAMP3-203ENST00000496212 CEP170Q5SW79 1584 aa23.66■■□□□ 1.38
RAMP3-203ENST00000496212 TRIM41Q8WV44 630 aa23.66■■□□□ 1.38
RAMP3-203ENST00000496212 RIMBP3CA6NJZ7 1639 aa23.66■■□□□ 1.38
RAMP3-203ENST00000496212 RIMBP3BA6NNM3 1639 aa23.66■■□□□ 1.38
RAMP3-203ENST00000496212 RIMBP3Q9UFD9 1639 aa23.66■■□□□ 1.38
RAMP3-203ENST00000496212 RUSC2Q8N2Y8 1516 aa23.61■■□□□ 1.37
RAMP3-203ENST00000496212 ARHGEF11O15085 1522 aa23.6■■□□□ 1.37
RAMP3-203ENST00000496212 IGF1RP08069 1367 aa23.57■■□□□ 1.36
RAMP3-203ENST00000496212 NUP160Q12769 1436 aa23.56■■□□□ 1.36
RAMP3-203ENST00000496212 SHROOM2Q13796 1616 aa23.48■■□□□ 1.35
RAMP3-203ENST00000496212 CARMIL1Q5VZK9 1371 aa23.46■■□□□ 1.35
RAMP3-203ENST00000496212 ERCC6L2Q5T890 1561 aa23.42■■□□□ 1.34
RAMP3-203ENST00000496212 ARAP1Q96P48 1450 aa23.41■■□□□ 1.34
RAMP3-203ENST00000496212 CHIC1Q5VXU3 224 aa23.4■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms