RNA–Protein interactions for RNA: ENST00000229328.9

PRKAB1-201, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKAB1, Length 2,610 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-201ENST00000229328 NISCHQ9Y2I1 1504 aa31.58■■■□□ 2.65
PRKAB1-201ENST00000229328 CCDC180Q9P1Z9 1646 aa27.18■■□□□ 1.94
PRKAB1-201ENST00000229328 ZCCHC6Q5VYS8 1495 aaKnown RBP26.6■■□□□ 1.85
PRKAB1-201ENST00000229328 SHROOM4Q9ULL8 1493 aa26.33■■□□□ 1.81
PRKAB1-201ENST00000229328 DCAF8L2P0C7V8 631 aa26.17■■□□□ 1.78
PRKAB1-201ENST00000229328 DCAF1Q9Y4B6 1507 aa25.98■■□□□ 1.75
PRKAB1-201ENST00000229328 ABCC9O60706 1549 aa25.56■■□□□ 1.68
PRKAB1-201ENST00000229328 SUPT5HO00267 1087 aaKnown RBP25.54■■□□□ 1.68
PRKAB1-201ENST00000229328 MYO15BQ96JP2 1530 aa25.46■■□□□ 1.67
PRKAB1-201ENST00000229328 SCRIBQ14160 1630 aa25.27■■□□□ 1.64
PRKAB1-201ENST00000229328 NACADO15069 1562 aa25.24■■□□□ 1.63
PRKAB1-201ENST00000229328 RB1CC1Q8TDY2 1594 aa24.94■■□□□ 1.58
PRKAB1-201ENST00000229328 RSF1Q96T23 1441 aaPredicted RBP24.73■■□□□ 1.55
PRKAB1-201ENST00000229328 CECR2Q9BXF3 1484 aa24.63■■□□□ 1.53
PRKAB1-201ENST00000229328 CHIC1Q5VXU3 224 aa24.62■■□□□ 1.53
PRKAB1-201ENST00000229328 UNC13AQ9UPW8 1703 aa24.55■■□□□ 1.52
PRKAB1-201ENST00000229328 MROH2BQ7Z745 1585 aa24.5■■□□□ 1.51
PRKAB1-201ENST00000229328 WIZO95785 1651 aa24.32■■□□□ 1.48
PRKAB1-201ENST00000229328 BAZ1AQ9NRL2 1556 aaPredicted RBP24.3■■□□□ 1.48
PRKAB1-201ENST00000229328 BICRAQ9NZM4 1560 aa24.29■■□□□ 1.48
PRKAB1-201ENST00000229328 PABPN1Q86U42 306 aaKnown RBP eCLIP24.28■■□□□ 1.48
PRKAB1-201ENST00000229328 SMARCA4P51532 1647 aa24.17■■□□□ 1.46
PRKAB1-201ENST00000229328 TOP2AP11388 1531 aaKnown RBP23.98■■□□□ 1.43
PRKAB1-201ENST00000229328 TRIM41Q8WV44 630 aa23.87■■□□□ 1.41
PRKAB1-201ENST00000229328 CCDC88BA6NC98 1476 aa23.83■■□□□ 1.4
PRKAB1-201ENST00000229328 SMARCA2P51531 1590 aa23.82■■□□□ 1.4
PRKAB1-201ENST00000229328 LOC105371045A0A1W2PR82 267 aa23.81■■□□□ 1.4
PRKAB1-201ENST00000229328 EIF4G1Q04637 1599 aaKnown RBP23.8■■□□□ 1.4
PRKAB1-201ENST00000229328 PEG3Q9GZU2 1588 aa23.78■■□□□ 1.4
PRKAB1-201ENST00000229328 ATAD2BQ9ULI0 1458 aa23.69■■□□□ 1.38
PRKAB1-201ENST00000229328 FAM9AQ8IZU1 332 aaPredicted RBP23.6■■□□□ 1.37
PRKAB1-201ENST00000229328 BAZ1BQ9UIG0 1483 aaKnown RBP23.57■■□□□ 1.36
PRKAB1-201ENST00000229328 ABCC8Q09428 1581 aa23.54■■□□□ 1.36
PRKAB1-201ENST00000229328 EHMT2Q96KQ7 1210 aa23.36■■□□□ 1.33
PRKAB1-201ENST00000229328 NCAPD3P42695 1498 aa23.35■■□□□ 1.33
PRKAB1-201ENST00000229328 HMGXB3Q12766 1538 aa23.31■■□□□ 1.32
PRKAB1-201ENST00000229328 WRNQ14191 1432 aaPredicted RBP eCLIP23.24■■□□□ 1.31
PRKAB1-201ENST00000229328 SOGA1O94964 1423 aa23.2■■□□□ 1.3
PRKAB1-201ENST00000229328 PCGF6Q9BYE7 350 aa23.17■■□□□ 1.3
PRKAB1-201ENST00000229328 SYNJ1O43426 1573 aa23.16■■□□□ 1.3
PRKAB1-201ENST00000229328 RUSC2Q8N2Y8 1516 aa23.12■■□□□ 1.29
PRKAB1-201ENST00000229328 CC2D2AQ9P2K1 1620 aa23.06■■□□□ 1.28
PRKAB1-201ENST00000229328 EEA1Q15075 1411 aa23.02■■□□□ 1.28
PRKAB1-201ENST00000229328 CSRNP3Q8WYN3 585 aa23.01■■□□□ 1.27
PRKAB1-201ENST00000229328 CFTRP13569 1480 aa22.99■■□□□ 1.27
PRKAB1-201ENST00000229328 TOP2BQ02880 1626 aa22.95■■□□□ 1.26
PRKAB1-201ENST00000229328 TRIM26Q12899 539 aaPredicted RBP22.92■■□□□ 1.26
PRKAB1-201ENST00000229328 BIVM-ERCC5R4GMW8 1640 aa22.89■■□□□ 1.26
PRKAB1-201ENST00000229328 CUX1P39880 1505 aa22.85■■□□□ 1.25
PRKAB1-201ENST00000229328 TNIKQ9UKE5 1360 aa22.84■■□□□ 1.25
PRKAB1-201ENST00000229328 CADPSQ9ULU8 1353 aa22.83■■□□□ 1.25
PRKAB1-201ENST00000229328 GOLGA3Q08378 1498 aa22.81■■□□□ 1.24
PRKAB1-201ENST00000229328 CEP162Q5TB80 1403 aa22.81■■□□□ 1.24
PRKAB1-201ENST00000229328 UBTFP17480 764 aaKnown RBP22.81■■□□□ 1.24
PRKAB1-201ENST00000229328 HRCP23327 699 aa22.79■■□□□ 1.24
PRKAB1-201ENST00000229328 PRDM2Q13029 1718 aa22.79■■□□□ 1.24
PRKAB1-201ENST00000229328 CEP164Q9UPV0 1460 aa22.76■■□□□ 1.23
PRKAB1-201ENST00000229328 KIF21BO75037 1637 aa22.75■■□□□ 1.23
PRKAB1-201ENST00000229328 PPARGC1BQ86YN6 1023 aaKnown RBP22.73■■□□□ 1.23
PRKAB1-201ENST00000229328 RAPGEF2Q9Y4G8 1499 aa22.67■■□□□ 1.22
PRKAB1-201ENST00000229328 NESP48681 1621 aa22.61■■□□□ 1.21
PRKAB1-201ENST00000229328 FANCD2Q9BXW9 1451 aa22.6■■□□□ 1.21
PRKAB1-201ENST00000229328 DNAJC5BQ9UF47 199 aa22.6■■□□□ 1.21
PRKAB1-201ENST00000229328 KIF27Q86VH2 1401 aa22.57■■□□□ 1.2
PRKAB1-201ENST00000229328 PRXQ9BXM0 1461 aa22.56■■□□□ 1.2
PRKAB1-201ENST00000229328 FGD5Q6ZNL6 1462 aa22.52■■□□□ 1.2
PRKAB1-201ENST00000229328 CLIP1P30622 1438 aa22.52■■□□□ 1.19
PRKAB1-201ENST00000229328 ERICH3Q5RHP9 1530 aa22.5■■□□□ 1.19
PRKAB1-201ENST00000229328 CUX2O14529 1486 aa22.47■■□□□ 1.19
PRKAB1-201ENST00000229328 TTBK1Q5TCY1 1321 aaPredicted RBP22.46■■□□□ 1.19
PRKAB1-201ENST00000229328 RANGAP1P46060 587 aaPredicted RBP22.45■■□□□ 1.19
PRKAB1-201ENST00000229328 LAMC3Q9Y6N6 1575 aa22.45■■□□□ 1.18
PRKAB1-201ENST00000229328 DNMBPQ6XZF7 1577 aa22.42■■□□□ 1.18
PRKAB1-201ENST00000229328 TOPBP1Q92547 1522 aa22.4■■□□□ 1.18
PRKAB1-201ENST00000229328 IGF1RP08069 1367 aa22.39■■□□□ 1.18
PRKAB1-201ENST00000229328 VPS8Q8N3P4 1428 aa22.36■■□□□ 1.17
PRKAB1-201ENST00000229328 RAD54L2Q9Y4B4 1467 aa22.35■■□□□ 1.17
PRKAB1-201ENST00000229328 POLA1P09884 1462 aaPredicted RBP22.34■■□□□ 1.17
PRKAB1-201ENST00000229328 URB2Q14146 1524 aaKnown RBP22.32■■□□□ 1.16
PRKAB1-201ENST00000229328 PDS5BQ9NTI5 1447 aa22.29■■□□□ 1.16
PRKAB1-201ENST00000229328 CARMIL1Q5VZK9 1371 aa22.27■■□□□ 1.16
PRKAB1-201ENST00000229328 ABCA10Q8WWZ4 1543 aa22.27■■□□□ 1.16
PRKAB1-201ENST00000229328 ARAP1Q96P48 1450 aa22.26■■□□□ 1.15
PRKAB1-201ENST00000229328 KIF21AQ7Z4S6 1674 aa22.24■■□□□ 1.15
PRKAB1-201ENST00000229328 ARHGAP35Q9NRY4 1499 aa22.16■■□□□ 1.14
PRKAB1-201ENST00000229328 APLP2Q06481 763 aa22.15■■□□□ 1.14
PRKAB1-201ENST00000229328 WDR97A6NE52 1622 aa22.15■■□□□ 1.14
PRKAB1-201ENST00000229328 ZEB1P37275 1124 aaPredicted RBP22.13■■□□□ 1.13
PRKAB1-201ENST00000229328 TDRD9Q8NDG6 1382 aaKnown RBP22.1■■□□□ 1.13
PRKAB1-201ENST00000229328 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.1■■□□□ 1.13
PRKAB1-201ENST00000229328 ABCA5Q8WWZ7 1642 aa22.05■■□□□ 1.12
PRKAB1-201ENST00000229328 CUL7Q14999 1698 aa22.05■■□□□ 1.12
PRKAB1-201ENST00000229328 GAPVD1Q14C86 1478 aa22.02■■□□□ 1.12
PRKAB1-201ENST00000229328 TARBP1Q13395 1621 aaKnown RBP22.02■■□□□ 1.11
PRKAB1-201ENST00000229328 KANK4Q5T7N3 995 aaPredicted RBP22.01■■□□□ 1.11
PRKAB1-201ENST00000229328 MRC2Q9UBG0 1479 aa22■■□□□ 1.11
PRKAB1-201ENST00000229328 CCER1Q8TC90 406 aaPredicted RBP21.99■■□□□ 1.11
PRKAB1-201ENST00000229328 HNRNPUL2Q1KMD3 747 aaKnown RBP21.93■■□□□ 1.1
PRKAB1-201ENST00000229328 P3H3Q8IVL6 736 aa21.93■■□□□ 1.1
PRKAB1-201ENST00000229328 CTTNBP2Q8WZ74 1663 aa21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 835 ms