Protein–RNA interactions for Protein: Q8WXD2

SCG3, Secretogranin-3, humanhuman

Known RBP Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3Q8WXD2 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC14.31□□□□□ -0.12
SCG3Q8WXD2 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC14.31□□□□□ -0.12
SCG3Q8WXD2 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC14.31□□□□□ -0.12
SCG3Q8WXD2 LRCH3-203ENST00000425562 2970 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
SCG3Q8WXD2 XBP1P1-201ENST00000436573 652 ntBASIC14.31□□□□□ -0.12
SCG3Q8WXD2 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
SCG3Q8WXD2 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC14.31□□□□□ -0.12
SCG3Q8WXD2 IGLV3-15-201ENST00000518356 244 ntBASIC14.31□□□□□ -0.12
SCG3Q8WXD2 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC14.31□□□□□ -0.12
SCG3Q8WXD2 PGAM1P5-201ENST00000548011 764 ntBASIC14.31□□□□□ -0.12
SCG3Q8WXD2 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC14.31□□□□□ -0.12
SCG3Q8WXD2 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC14.31□□□□□ -0.12
SCG3Q8WXD2 LINC01922-201ENST00000562582 719 ntBASIC14.31□□□□□ -0.12
SCG3Q8WXD2 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC14.31□□□□□ -0.12
SCG3Q8WXD2 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC14.31□□□□□ -0.12
SCG3Q8WXD2 AC128714.1-201ENST00000637035 887 ntBASIC14.31□□□□□ -0.12
SCG3Q8WXD2 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC14.31□□□□□ -0.12
SCG3Q8WXD2 TESMIN-204ENST00000443940 3495 ntTSL 2 BASIC14.31□□□□□ -0.12
SCG3Q8WXD2 NPNT-211ENST00000506666 2187 ntTSL 2 BASIC14.31□□□□□ -0.12
SCG3Q8WXD2 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SCG3Q8WXD2 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SCG3Q8WXD2 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
SCG3Q8WXD2 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
SCG3Q8WXD2 EWSAT1-201ENST00000415504 2214 ntTSL 2 BASIC14.31□□□□□ -0.12
SCG3Q8WXD2 AC072061.1-201ENST00000569710 2234 ntBASIC14.31□□□□□ -0.12
SCG3Q8WXD2 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC14.31□□□□□ -0.12
SCG3Q8WXD2 TRMT2B-206ENST00000545398 3106 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
SCG3Q8WXD2 DUOX2-205ENST00000603300 6345 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
SCG3Q8WXD2 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SCG3Q8WXD2 TRPV1-206ENST00000571088 4105 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SCG3Q8WXD2 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
SCG3Q8WXD2 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SCG3Q8WXD2 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
SCG3Q8WXD2 ITGB2-201ENST00000302347 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SCG3Q8WXD2 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SCG3Q8WXD2 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SCG3Q8WXD2 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SCG3Q8WXD2 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SCG3Q8WXD2 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC14.3□□□□□ -0.12
SCG3Q8WXD2 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
SCG3Q8WXD2 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC14.3□□□□□ -0.12
SCG3Q8WXD2 HECTD2-201ENST00000298068 4802 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SCG3Q8WXD2 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SCG3Q8WXD2 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC14.3□□□□□ -0.12
SCG3Q8WXD2 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
SCG3Q8WXD2 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SCG3Q8WXD2 ZFAND3-201ENST00000287218 3366 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SCG3Q8WXD2 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
SCG3Q8WXD2 PCDHA11-202ENST00000616325 3418 ntAPPRIS ALT2 BASIC14.3□□□□□ -0.12
SCG3Q8WXD2 SMC6-201ENST00000351948 5173 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SCG3Q8WXD2 PRKN-205ENST00000366897 2877 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SCG3Q8WXD2 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
SCG3Q8WXD2 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
SCG3Q8WXD2 PIK3R6-204ENST00000619866 3041 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
SCG3Q8WXD2 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
SCG3Q8WXD2 PTPRVP-205ENST00000641549 5067 ntBASIC14.3□□□□□ -0.12
SCG3Q8WXD2 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SCG3Q8WXD2 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
SCG3Q8WXD2 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SCG3Q8WXD2 PDIA3P2-201ENST00000428073 158 ntBASIC14.3□□□□□ -0.12
SCG3Q8WXD2 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC14.3□□□□□ -0.12
SCG3Q8WXD2 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SCG3Q8WXD2 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC14.3□□□□□ -0.12
SCG3Q8WXD2 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
SCG3Q8WXD2 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC14.3□□□□□ -0.12
SCG3Q8WXD2 NAT9-211ENST00000580632 799 ntTSL 3 BASIC14.3□□□□□ -0.12
SCG3Q8WXD2 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC14.3□□□□□ -0.12
SCG3Q8WXD2 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC14.3□□□□□ -0.12
SCG3Q8WXD2 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC14.3□□□□□ -0.12
SCG3Q8WXD2 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SCG3Q8WXD2 FRMPD2B-201ENST00000431305 1347 ntBASIC14.3□□□□□ -0.12
SCG3Q8WXD2 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SCG3Q8WXD2 LRRC17-201ENST00000249377 2002 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SCG3Q8WXD2 AC012435.1-201ENST00000563287 3385 ntTSL 2 BASIC14.3□□□□□ -0.12
SCG3Q8WXD2 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SCG3Q8WXD2 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC14.3□□□□□ -0.12
SCG3Q8WXD2 HPCAL4-201ENST00000372844 4856 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SCG3Q8WXD2 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SCG3Q8WXD2 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SCG3Q8WXD2 ESPNL-202ENST00000409169 4441 ntTSL 5 BASIC14.3□□□□□ -0.12
SCG3Q8WXD2 SLC5A9-210ENST00000533824 2219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
SCG3Q8WXD2 RNH1-224ENST00000534797 2973 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SCG3Q8WXD2 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SCG3Q8WXD2 CYP4F23P-201ENST00000593402 1579 ntBASIC14.3□□□□□ -0.12
SCG3Q8WXD2 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
SCG3Q8WXD2 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SCG3Q8WXD2 MEG3-213ENST00000455531 4867 ntTSL 2 BASIC14.3□□□□□ -0.12
SCG3Q8WXD2 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC14.3□□□□□ -0.12
SCG3Q8WXD2 DDX43-201ENST00000370336 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SCG3Q8WXD2 COL6A3-202ENST00000347401 8625 ntTSL 5 BASIC14.29□□□□□ -0.12
SCG3Q8WXD2 COL6A3-209ENST00000472056 8628 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SCG3Q8WXD2 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SCG3Q8WXD2 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
SCG3Q8WXD2 KIAA0930-201ENST00000251993 2723 ntTSL 2 BASIC14.29□□□□□ -0.12
SCG3Q8WXD2 RAB37-205ENST00000392614 2704 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
SCG3Q8WXD2 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC14.29□□□□□ -0.12
SCG3Q8WXD2 STRA6-202ENST00000395105 2800 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SCG3Q8WXD2 TVP23C-CDRT4-203ENST00000522212 2833 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
SCG3Q8WXD2 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
SCG3Q8WXD2 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms