RNA–Protein interactions for RNA: ENST00000406230.5

CSF2RB-203, Transcript of colony stimulating factor 2 receptor beta common subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CSF2RB, Length 2,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF2RB-203ENST00000406230 NISCHQ9Y2I1 1504 aa29.34■■■□□ 2.29
CSF2RB-203ENST00000406230 SHROOM4Q9ULL8 1493 aa25.17■■□□□ 1.62
CSF2RB-203ENST00000406230 CCDC180Q9P1Z9 1646 aa24.89■■□□□ 1.57
CSF2RB-203ENST00000406230 ZCCHC6Q5VYS8 1495 aaKnown RBP24.78■■□□□ 1.56
CSF2RB-203ENST00000406230 DCAF8L2P0C7V8 631 aa24.62■■□□□ 1.53
CSF2RB-203ENST00000406230 SUPT5HO00267 1087 aaKnown RBP24.6■■□□□ 1.53
CSF2RB-203ENST00000406230 DCAF1Q9Y4B6 1507 aa23.95■■□□□ 1.42
CSF2RB-203ENST00000406230 CHIC1Q5VXU3 224 aa23.75■■□□□ 1.39
CSF2RB-203ENST00000406230 MYO15BQ96JP2 1530 aa23.67■■□□□ 1.38
CSF2RB-203ENST00000406230 SCRIBQ14160 1630 aa23.51■■□□□ 1.35
CSF2RB-203ENST00000406230 ABCC9O60706 1549 aa23.4■■□□□ 1.34
CSF2RB-203ENST00000406230 RSF1Q96T23 1441 aaPredicted RBP23.22■■□□□ 1.31
CSF2RB-203ENST00000406230 LOC105371045A0A1W2PR82 267 aa23.15■■□□□ 1.3
CSF2RB-203ENST00000406230 NACADO15069 1562 aa23.08■■□□□ 1.28
CSF2RB-203ENST00000406230 CECR2Q9BXF3 1484 aa22.99■■□□□ 1.27
CSF2RB-203ENST00000406230 RB1CC1Q8TDY2 1594 aa22.99■■□□□ 1.27
CSF2RB-203ENST00000406230 PCGF6Q9BYE7 350 aa22.98■■□□□ 1.27
CSF2RB-203ENST00000406230 MROH2BQ7Z745 1585 aa22.87■■□□□ 1.25
CSF2RB-203ENST00000406230 TRIM41Q8WV44 630 aa22.84■■□□□ 1.25
CSF2RB-203ENST00000406230 HRCP23327 699 aa22.79■■□□□ 1.24
CSF2RB-203ENST00000406230 FAM9AQ8IZU1 332 aaPredicted RBP22.78■■□□□ 1.24
CSF2RB-203ENST00000406230 WIZO95785 1651 aa22.74■■□□□ 1.23
CSF2RB-203ENST00000406230 EHMT2Q96KQ7 1210 aa22.7■■□□□ 1.22
CSF2RB-203ENST00000406230 BAZ1AQ9NRL2 1556 aaPredicted RBP22.52■■□□□ 1.2
CSF2RB-203ENST00000406230 PPARGC1BQ86YN6 1023 aaKnown RBP22.5■■□□□ 1.19
CSF2RB-203ENST00000406230 TRIM26Q12899 539 aaPredicted RBP22.45■■□□□ 1.18
CSF2RB-203ENST00000406230 UNC13AQ9UPW8 1703 aa22.45■■□□□ 1.18
CSF2RB-203ENST00000406230 PABPN1Q86U42 306 aaKnown RBP eCLIP22.42■■□□□ 1.18
CSF2RB-203ENST00000406230 SMARCA4P51532 1647 aa22.37■■□□□ 1.17
CSF2RB-203ENST00000406230 TOP2AP11388 1531 aaKnown RBP22.3■■□□□ 1.16
CSF2RB-203ENST00000406230 EIF4G1Q04637 1599 aaKnown RBP22.29■■□□□ 1.16
CSF2RB-203ENST00000406230 CCDC88BA6NC98 1476 aa22.27■■□□□ 1.16
CSF2RB-203ENST00000406230 ABCC8Q09428 1581 aa22.24■■□□□ 1.15
CSF2RB-203ENST00000406230 SMARCA2P51531 1590 aa22.21■■□□□ 1.15
CSF2RB-203ENST00000406230 BICRAQ9NZM4 1560 aa22.19■■□□□ 1.14
CSF2RB-203ENST00000406230 SOGA1O94964 1423 aa22.01■■□□□ 1.11
CSF2RB-203ENST00000406230 RUSC2Q8N2Y8 1516 aa21.92■■□□□ 1.1
CSF2RB-203ENST00000406230 TTBK1Q5TCY1 1321 aaPredicted RBP21.91■■□□□ 1.1
CSF2RB-203ENST00000406230 PEG3Q9GZU2 1588 aa21.86■■□□□ 1.09
CSF2RB-203ENST00000406230 ATAD2BQ9ULI0 1458 aa21.85■■□□□ 1.09
CSF2RB-203ENST00000406230 CSRNP3Q8WYN3 585 aa21.83■■□□□ 1.08
CSF2RB-203ENST00000406230 WRNQ14191 1432 aaPredicted RBP eCLIP21.82■■□□□ 1.08
CSF2RB-203ENST00000406230 UBTFP17480 764 aaKnown RBP21.81■■□□□ 1.08
CSF2RB-203ENST00000406230 ZEB1P37275 1124 aaPredicted RBP21.81■■□□□ 1.08
CSF2RB-203ENST00000406230 CEP162Q5TB80 1403 aa21.81■■□□□ 1.08
CSF2RB-203ENST00000406230 BAZ1BQ9UIG0 1483 aaKnown RBP21.8■■□□□ 1.08
CSF2RB-203ENST00000406230 SYNJ1O43426 1573 aa21.72■■□□□ 1.07
CSF2RB-203ENST00000406230 TNIKQ9UKE5 1360 aa21.72■■□□□ 1.07
CSF2RB-203ENST00000406230 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.71■■□□□ 1.07
CSF2RB-203ENST00000406230 EEA1Q15075 1411 aa21.7■■□□□ 1.06
CSF2RB-203ENST00000406230 GOLGA3Q08378 1498 aa21.63■■□□□ 1.05
CSF2RB-203ENST00000406230 CCER1Q8TC90 406 aaPredicted RBP21.6■■□□□ 1.05
CSF2RB-203ENST00000406230 RANGAP1P46060 587 aaPredicted RBP21.56■■□□□ 1.04
CSF2RB-203ENST00000406230 CEP164Q9UPV0 1460 aa21.51■■□□□ 1.03
CSF2RB-203ENST00000406230 RAPGEF2Q9Y4G8 1499 aa21.45■■□□□ 1.02
CSF2RB-203ENST00000406230 KIF21BO75037 1637 aa21.43■■□□□ 1.02
CSF2RB-203ENST00000406230 CLIP1P30622 1438 aa21.42■■□□□ 1.02
CSF2RB-203ENST00000406230 TOP2BQ02880 1626 aa21.4■■□□□ 1.02
CSF2RB-203ENST00000406230 NCAPD3P42695 1498 aa21.39■■□□□ 1.01
CSF2RB-203ENST00000406230 HMGXB3Q12766 1538 aa21.35■■□□□ 1.01
CSF2RB-203ENST00000406230 BIVM-ERCC5R4GMW8 1640 aa21.29■■□□□ 1
CSF2RB-203ENST00000406230 HNRNPUL2Q1KMD3 747 aaKnown RBP21.29■■□□□ 1
CSF2RB-203ENST00000406230 CUX1P39880 1505 aa21.28■■□□□ 1
CSF2RB-203ENST00000406230 VPS8Q8N3P4 1428 aa21.28■■□□□ 1
CSF2RB-203ENST00000406230 APLP2Q06481 763 aa21.24■□□□□ 0.99
CSF2RB-203ENST00000406230 CFTRP13569 1480 aa21.21■□□□□ 0.99
CSF2RB-203ENST00000406230 PRXQ9BXM0 1461 aa21.18■□□□□ 0.98
CSF2RB-203ENST00000406230 KIF27Q86VH2 1401 aa21.13■□□□□ 0.97
CSF2RB-203ENST00000406230 ERICH3Q5RHP9 1530 aa21.11■□□□□ 0.97
CSF2RB-203ENST00000406230 ARAP1Q96P48 1450 aa21.08■□□□□ 0.97
CSF2RB-203ENST00000406230 DIEXFQ68CQ4 756 aaKnown RBP21.07■□□□□ 0.96
CSF2RB-203ENST00000406230 KANK4Q5T7N3 995 aaPredicted RBP21.04■□□□□ 0.96
CSF2RB-203ENST00000406230 CADPSQ9ULU8 1353 aa21.03■□□□□ 0.96
CSF2RB-203ENST00000406230 CUX2O14529 1486 aa21.01■□□□□ 0.95
CSF2RB-203ENST00000406230 CC2D2AQ9P2K1 1620 aa20.99■□□□□ 0.95
CSF2RB-203ENST00000406230 SCAF1Q9H7N4 1312 aaKnown RBP20.97■□□□□ 0.95
CSF2RB-203ENST00000406230 PRDM2Q13029 1718 aa20.94■□□□□ 0.94
CSF2RB-203ENST00000406230 IGF1RP08069 1367 aa20.94■□□□□ 0.94
CSF2RB-203ENST00000406230 FGD5Q6ZNL6 1462 aa20.93■□□□□ 0.94
CSF2RB-203ENST00000406230 ARHGAP35Q9NRY4 1499 aa20.92■□□□□ 0.94
CSF2RB-203ENST00000406230 ZNF316A6NFI3 1004 aaPredicted RBP20.91■□□□□ 0.94
CSF2RB-203ENST00000406230 CARMIL1Q5VZK9 1371 aa20.85■□□□□ 0.93
CSF2RB-203ENST00000406230 FANCD2Q9BXW9 1451 aa20.85■□□□□ 0.93
CSF2RB-203ENST00000406230 ITGAEP38570 1179 aa20.83■□□□□ 0.93
CSF2RB-203ENST00000406230 NEUROD1Q13562 356 aa20.83■□□□□ 0.92
CSF2RB-203ENST00000406230 NESP48681 1621 aa20.82■□□□□ 0.92
CSF2RB-203ENST00000406230 P3H3Q8IVL6 736 aa20.8■□□□□ 0.92
CSF2RB-203ENST00000406230 RAD54L2Q9Y4B4 1467 aa20.79■□□□□ 0.92
CSF2RB-203ENST00000406230 ACIN1Q9UKV3 1341 aaKnown RBP20.77■□□□□ 0.92
CSF2RB-203ENST00000406230 DHX57Q6P158 1386 aaKnown RBP20.74■□□□□ 0.91
CSF2RB-203ENST00000406230 RRBP1Q9P2E9 1410 aaKnown RBP20.73■□□□□ 0.91
CSF2RB-203ENST00000406230 ATP1B4Q9UN42 357 aaPredicted RBP20.73■□□□□ 0.91
CSF2RB-203ENST00000406230 CCNB3Q8WWL7 1395 aa20.72■□□□□ 0.91
CSF2RB-203ENST00000406230 POLA1P09884 1462 aaPredicted RBP20.69■□□□□ 0.9
CSF2RB-203ENST00000406230 YTHDC1Q96MU7 727 aaKnown RBP20.69■□□□□ 0.9
CSF2RB-203ENST00000406230 TOPBP1Q92547 1522 aa20.69■□□□□ 0.9
CSF2RB-203ENST00000406230 DNAJC5BQ9UF47 199 aa20.68■□□□□ 0.9
CSF2RB-203ENST00000406230 DNMBPQ6XZF7 1577 aa20.67■□□□□ 0.9
CSF2RB-203ENST00000406230 MIER1Q8N108 512 aa20.67■□□□□ 0.9
CSF2RB-203ENST00000406230 CENPBP07199 599 aaPredicted RBP20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms