RNA–Protein interactions for RNA: ENST00000437316.6

HLA-DQB2-232, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB2, Length 1,214 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-232ENST00000437316 NISCHQ9Y2I1 1504 aa34.6■■■■□ 3.13
HLA-DQB2-232ENST00000437316 CCDC180Q9P1Z9 1646 aa30.85■■■□□ 2.53
HLA-DQB2-232ENST00000437316 ABCC9O60706 1549 aa30.16■■■□□ 2.42
HLA-DQB2-232ENST00000437316 RB1CC1Q8TDY2 1594 aa29.07■■■□□ 2.24
HLA-DQB2-232ENST00000437316 NACADO15069 1562 aa29.01■■■□□ 2.23
HLA-DQB2-232ENST00000437316 DCAF8L2P0C7V8 631 aa28.98■■■□□ 2.23
HLA-DQB2-232ENST00000437316 ZCCHC6Q5VYS8 1495 aaKnown RBP28.82■■■□□ 2.2
HLA-DQB2-232ENST00000437316 MYO15BQ96JP2 1530 aa28.79■■■□□ 2.2
HLA-DQB2-232ENST00000437316 DCAF1Q9Y4B6 1507 aa28.65■■■□□ 2.18
HLA-DQB2-232ENST00000437316 UNC13AQ9UPW8 1703 aa28.32■■■□□ 2.12
HLA-DQB2-232ENST00000437316 PABPN1Q86U42 306 aaKnown RBP eCLIP28.13■■■□□ 2.09
HLA-DQB2-232ENST00000437316 SCRIBQ14160 1630 aa28.12■■■□□ 2.09
HLA-DQB2-232ENST00000437316 BICRAQ9NZM4 1560 aa28.05■■■□□ 2.08
HLA-DQB2-232ENST00000437316 SHROOM4Q9ULL8 1493 aa27.92■■■□□ 2.06
HLA-DQB2-232ENST00000437316 DNAJC5BQ9UF47 199 aa27.55■■■□□ 2
HLA-DQB2-232ENST00000437316 EIF4G1Q04637 1599 aaKnown RBP27.39■■□□□ 1.97
HLA-DQB2-232ENST00000437316 CC2D2AQ9P2K1 1620 aa27.28■■□□□ 1.96
HLA-DQB2-232ENST00000437316 CECR2Q9BXF3 1484 aa27.13■■□□□ 1.93
HLA-DQB2-232ENST00000437316 BAZ1AQ9NRL2 1556 aaPredicted RBP26.88■■□□□ 1.89
HLA-DQB2-232ENST00000437316 SMARCA4P51532 1647 aa26.87■■□□□ 1.89
HLA-DQB2-232ENST00000437316 SMARCA2P51531 1590 aa26.77■■□□□ 1.88
HLA-DQB2-232ENST00000437316 ATAD2BQ9ULI0 1458 aa26.71■■□□□ 1.87
HLA-DQB2-232ENST00000437316 NCAPD3P42695 1498 aa26.7■■□□□ 1.87
HLA-DQB2-232ENST00000437316 HMGXB3Q12766 1538 aa26.63■■□□□ 1.85
HLA-DQB2-232ENST00000437316 MROH2BQ7Z745 1585 aa26.63■■□□□ 1.85
HLA-DQB2-232ENST00000437316 PEG3Q9GZU2 1588 aa26.59■■□□□ 1.85
HLA-DQB2-232ENST00000437316 BAZ1BQ9UIG0 1483 aaKnown RBP26.56■■□□□ 1.84
HLA-DQB2-232ENST00000437316 WIZO95785 1651 aa26.35■■□□□ 1.81
HLA-DQB2-232ENST00000437316 RSF1Q96T23 1441 aaPredicted RBP26.31■■□□□ 1.8
HLA-DQB2-232ENST00000437316 TOP2AP11388 1531 aaKnown RBP26.14■■□□□ 1.77
HLA-DQB2-232ENST00000437316 ERCC6Q03468 1493 aa26.11■■□□□ 1.77
HLA-DQB2-232ENST00000437316 LAMC3Q9Y6N6 1575 aa26.07■■□□□ 1.76
HLA-DQB2-232ENST00000437316 NESP48681 1621 aa26.03■■□□□ 1.76
HLA-DQB2-232ENST00000437316 CADPSQ9ULU8 1353 aa25.95■■□□□ 1.74
HLA-DQB2-232ENST00000437316 PDS5BQ9NTI5 1447 aa25.92■■□□□ 1.74
HLA-DQB2-232ENST00000437316 CUX2O14529 1486 aa25.79■■□□□ 1.72
HLA-DQB2-232ENST00000437316 KIF21AQ7Z4S6 1674 aa25.78■■□□□ 1.72
HLA-DQB2-232ENST00000437316 CFTRP13569 1480 aa25.77■■□□□ 1.72
HLA-DQB2-232ENST00000437316 CCDC88BA6NC98 1476 aa25.76■■□□□ 1.71
HLA-DQB2-232ENST00000437316 THOC2Q8NI27 1593 aaKnown RBP25.69■■□□□ 1.7
HLA-DQB2-232ENST00000437316 CEP164Q9UPV0 1460 aa25.68■■□□□ 1.7
HLA-DQB2-232ENST00000437316 SUPT5HO00267 1087 aaKnown RBP25.68■■□□□ 1.7
HLA-DQB2-232ENST00000437316 FANCD2Q9BXW9 1451 aa25.66■■□□□ 1.7
HLA-DQB2-232ENST00000437316 PRDM2Q13029 1718 aa25.66■■□□□ 1.7
HLA-DQB2-232ENST00000437316 MRC2Q9UBG0 1479 aa25.63■■□□□ 1.69
HLA-DQB2-232ENST00000437316 WDR62O43379 1518 aa25.51■■□□□ 1.67
HLA-DQB2-232ENST00000437316 URB2Q14146 1524 aaKnown RBP25.36■■□□□ 1.65
HLA-DQB2-232ENST00000437316 ABCC8Q09428 1581 aa25.31■■□□□ 1.64
HLA-DQB2-232ENST00000437316 DNMBPQ6XZF7 1577 aa25.23■■□□□ 1.63
HLA-DQB2-232ENST00000437316 TOPBP1Q92547 1522 aa25.23■■□□□ 1.63
HLA-DQB2-232ENST00000437316 IFT140Q96RY7 1462 aa25.13■■□□□ 1.61
HLA-DQB2-232ENST00000437316 POLA1P09884 1462 aaPredicted RBP25.01■■□□□ 1.59
HLA-DQB2-232ENST00000437316 CUX1P39880 1505 aa25■■□□□ 1.59
HLA-DQB2-232ENST00000437316 DNAJC5Q9H3Z4 198 aa24.96■■□□□ 1.59
HLA-DQB2-232ENST00000437316 FGD5Q6ZNL6 1462 aa24.96■■□□□ 1.59
HLA-DQB2-232ENST00000437316 SOGA1O94964 1423 aa24.93■■□□□ 1.58
HLA-DQB2-232ENST00000437316 TARBP1Q13395 1621 aaKnown RBP24.93■■□□□ 1.58
HLA-DQB2-232ENST00000437316 ZNF608Q9ULD9 1512 aaPredicted RBP24.92■■□□□ 1.58
HLA-DQB2-232ENST00000437316 EIF4G3O43432 1585 aaKnown RBP24.9■■□□□ 1.58
HLA-DQB2-232ENST00000437316 WRNQ14191 1432 aaPredicted RBP eCLIP24.88■■□□□ 1.57
HLA-DQB2-232ENST00000437316 RAD54L2Q9Y4B4 1467 aa24.87■■□□□ 1.57
HLA-DQB2-232ENST00000437316 WDR97A6NE52 1622 aa24.85■■□□□ 1.57
HLA-DQB2-232ENST00000437316 TOP2BQ02880 1626 aa24.82■■□□□ 1.56
HLA-DQB2-232ENST00000437316 BIVM-ERCC5R4GMW8 1640 aa24.82■■□□□ 1.56
HLA-DQB2-232ENST00000437316 AQRO60306 1485 aaKnown RBP eCLIP24.8■■□□□ 1.56
HLA-DQB2-232ENST00000437316 SYNJ1O43426 1573 aa24.77■■□□□ 1.56
HLA-DQB2-232ENST00000437316 TDRD9Q8NDG6 1382 aaKnown RBP24.76■■□□□ 1.55
HLA-DQB2-232ENST00000437316 ABCA10Q8WWZ4 1543 aa24.72■■□□□ 1.55
HLA-DQB2-232ENST00000437316 OSCARQ8IYS5 282 aa24.7■■□□□ 1.54
HLA-DQB2-232ENST00000437316 GRIN2BQ13224 1484 aa24.67■■□□□ 1.54
HLA-DQB2-232ENST00000437316 GAPVD1Q14C86 1478 aa24.65■■□□□ 1.54
HLA-DQB2-232ENST00000437316 MAGI1Q96QZ7 1491 aaPredicted RBP24.63■■□□□ 1.53
HLA-DQB2-232ENST00000437316 SNAPC4Q5SXM2 1469 aa24.62■■□□□ 1.53
HLA-DQB2-232ENST00000437316 PBRM1Q86U86 1689 aa24.62■■□□□ 1.53
HLA-DQB2-232ENST00000437316 ABCA5Q8WWZ7 1642 aa24.61■■□□□ 1.53
HLA-DQB2-232ENST00000437316 FBLN2P98095 1184 aa24.6■■□□□ 1.53
HLA-DQB2-232ENST00000437316 CHD1O14646 1710 aa24.6■■□□□ 1.53
HLA-DQB2-232ENST00000437316 CHMP7Q8WUX9 453 aaPredicted RBP24.53■■□□□ 1.52
HLA-DQB2-232ENST00000437316 SYNJ2O15056 1496 aa24.51■■□□□ 1.51
HLA-DQB2-232ENST00000437316 ERICH3Q5RHP9 1530 aa24.45■■□□□ 1.51
HLA-DQB2-232ENST00000437316 ADAMTS12P58397 1594 aa24.42■■□□□ 1.5
HLA-DQB2-232ENST00000437316 KIF27Q86VH2 1401 aa24.4■■□□□ 1.5
HLA-DQB2-232ENST00000437316 FHAD1B1AJZ9 1412 aa24.38■■□□□ 1.49
HLA-DQB2-232ENST00000437316 GRIN2AQ12879 1464 aa24.33■■□□□ 1.49
HLA-DQB2-232ENST00000437316 TRIM41Q8WV44 630 aa24.29■■□□□ 1.48
HLA-DQB2-232ENST00000437316 CLASP1Q7Z460 1538 aa24.29■■□□□ 1.48
HLA-DQB2-232ENST00000437316 RIMBP3CA6NJZ7 1639 aa24.28■■□□□ 1.48
HLA-DQB2-232ENST00000437316 RIMBP3BA6NNM3 1639 aa24.28■■□□□ 1.48
HLA-DQB2-232ENST00000437316 RIMBP3Q9UFD9 1639 aa24.28■■□□□ 1.48
HLA-DQB2-232ENST00000437316 ARHGEF11O15085 1522 aa24.28■■□□□ 1.48
HLA-DQB2-232ENST00000437316 CUL7Q14999 1698 aa24.27■■□□□ 1.48
HLA-DQB2-232ENST00000437316 IGF1RP08069 1367 aa24.2■■□□□ 1.46
HLA-DQB2-232ENST00000437316 NUP160Q12769 1436 aa24.19■■□□□ 1.46
HLA-DQB2-232ENST00000437316 CEP170Q5SW79 1584 aa24.17■■□□□ 1.46
HLA-DQB2-232ENST00000437316 CARMIL1Q5VZK9 1371 aa24.12■■□□□ 1.45
HLA-DQB2-232ENST00000437316 ARAP1Q96P48 1450 aa24.06■■□□□ 1.44
HLA-DQB2-232ENST00000437316 CYB5RLQ6IPT4 315 aa24.05■■□□□ 1.44
HLA-DQB2-232ENST00000437316 RUSC2Q8N2Y8 1516 aa24.04■■□□□ 1.44
HLA-DQB2-232ENST00000437316 SHROOM2Q13796 1616 aa24.02■■□□□ 1.44
HLA-DQB2-232ENST00000437316 RAPGEF2Q9Y4G8 1499 aa24■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms