RNA–Protein interactions for RNA: ENST00000433480.2

LINC00441-201, humanhuman

TSL 1 (best) BASIC

Gene LINC00441, Length 1,143 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00441-201ENST00000433480 NISCHQ9Y2I1 1504 aa34.2■■■■□ 3.07
LINC00441-201ENST00000433480 ABCC9O60706 1549 aa30.96■■■□□ 2.55
LINC00441-201ENST00000433480 CCDC180Q9P1Z9 1646 aa30.8■■■□□ 2.52
LINC00441-201ENST00000433480 RB1CC1Q8TDY2 1594 aa29.4■■■□□ 2.3
LINC00441-201ENST00000433480 DNAJC5BQ9UF47 199 aa29.2■■■□□ 2.26
LINC00441-201ENST00000433480 NACADO15069 1562 aa29.16■■■□□ 2.26
LINC00441-201ENST00000433480 DCAF8L2P0C7V8 631 aa28.92■■■□□ 2.22
LINC00441-201ENST00000433480 PABPN1Q86U42 306 aaKnown RBP eCLIP28.77■■■□□ 2.2
LINC00441-201ENST00000433480 UNC13AQ9UPW8 1703 aa28.72■■■□□ 2.19
LINC00441-201ENST00000433480 MYO15BQ96JP2 1530 aa28.7■■■□□ 2.19
LINC00441-201ENST00000433480 BICRAQ9NZM4 1560 aa28.54■■■□□ 2.16
LINC00441-201ENST00000433480 ZCCHC6Q5VYS8 1495 aaKnown RBP28.3■■■□□ 2.12
LINC00441-201ENST00000433480 DCAF1Q9Y4B6 1507 aa28.26■■■□□ 2.11
LINC00441-201ENST00000433480 SHROOM4Q9ULL8 1493 aa28.17■■■□□ 2.1
LINC00441-201ENST00000433480 SCRIBQ14160 1630 aa28.01■■■□□ 2.07
LINC00441-201ENST00000433480 CC2D2AQ9P2K1 1620 aa27.96■■■□□ 2.07
LINC00441-201ENST00000433480 CECR2Q9BXF3 1484 aa27.91■■■□□ 2.06
LINC00441-201ENST00000433480 EIF4G1Q04637 1599 aaKnown RBP27.86■■■□□ 2.05
LINC00441-201ENST00000433480 DNAJC5Q9H3Z4 198 aa26.98■■□□□ 1.91
LINC00441-201ENST00000433480 NCAPD3P42695 1498 aa26.92■■□□□ 1.9
LINC00441-201ENST00000433480 ATAD2BQ9ULI0 1458 aa26.8■■□□□ 1.88
LINC00441-201ENST00000433480 CUX2O14529 1486 aa26.79■■□□□ 1.88
LINC00441-201ENST00000433480 ERCC6Q03468 1493 aa26.74■■□□□ 1.87
LINC00441-201ENST00000433480 SMARCA4P51532 1647 aa26.72■■□□□ 1.87
LINC00441-201ENST00000433480 SMARCA2P51531 1590 aa26.72■■□□□ 1.87
LINC00441-201ENST00000433480 HMGXB3Q12766 1538 aa26.7■■□□□ 1.87
LINC00441-201ENST00000433480 BAZ1AQ9NRL2 1556 aaPredicted RBP26.57■■□□□ 1.84
LINC00441-201ENST00000433480 BAZ1BQ9UIG0 1483 aaKnown RBP26.53■■□□□ 1.84
LINC00441-201ENST00000433480 NESP48681 1621 aa26.53■■□□□ 1.84
LINC00441-201ENST00000433480 PEG3Q9GZU2 1588 aa26.48■■□□□ 1.83
LINC00441-201ENST00000433480 LAMC3Q9Y6N6 1575 aa26.35■■□□□ 1.81
LINC00441-201ENST00000433480 MROH2BQ7Z745 1585 aa26.34■■□□□ 1.81
LINC00441-201ENST00000433480 THOC2Q8NI27 1593 aaKnown RBP26.32■■□□□ 1.8
LINC00441-201ENST00000433480 PDS5BQ9NTI5 1447 aa26.2■■□□□ 1.78
LINC00441-201ENST00000433480 KIF21AQ7Z4S6 1674 aa26.19■■□□□ 1.78
LINC00441-201ENST00000433480 CADPSQ9ULU8 1353 aa26.08■■□□□ 1.77
LINC00441-201ENST00000433480 WIZO95785 1651 aa26■■□□□ 1.75
LINC00441-201ENST00000433480 MRC2Q9UBG0 1479 aa25.98■■□□□ 1.75
LINC00441-201ENST00000433480 RSF1Q96T23 1441 aaPredicted RBP25.95■■□□□ 1.74
LINC00441-201ENST00000433480 WDR62O43379 1518 aa25.92■■□□□ 1.74
LINC00441-201ENST00000433480 CEP164Q9UPV0 1460 aa25.84■■□□□ 1.73
LINC00441-201ENST00000433480 FANCD2Q9BXW9 1451 aa25.79■■□□□ 1.72
LINC00441-201ENST00000433480 CFTRP13569 1480 aa25.74■■□□□ 1.71
LINC00441-201ENST00000433480 TRIM41Q8WV44 630 aa25.7■■□□□ 1.7
LINC00441-201ENST00000433480 TOP2AP11388 1531 aaKnown RBP25.68■■□□□ 1.7
LINC00441-201ENST00000433480 SUPT5HO00267 1087 aaKnown RBP25.67■■□□□ 1.7
LINC00441-201ENST00000433480 URB2Q14146 1524 aaKnown RBP25.58■■□□□ 1.69
LINC00441-201ENST00000433480 OSCARQ8IYS5 282 aa25.52■■□□□ 1.68
LINC00441-201ENST00000433480 PRDM2Q13029 1718 aa25.47■■□□□ 1.67
LINC00441-201ENST00000433480 CCDC88BA6NC98 1476 aa25.39■■□□□ 1.65
LINC00441-201ENST00000433480 IFT140Q96RY7 1462 aa25.33■■□□□ 1.65
LINC00441-201ENST00000433480 ZNF608Q9ULD9 1512 aaPredicted RBP25.29■■□□□ 1.64
LINC00441-201ENST00000433480 TOPBP1Q92547 1522 aa25.27■■□□□ 1.64
LINC00441-201ENST00000433480 ABCC8Q09428 1581 aa25.23■■□□□ 1.63
LINC00441-201ENST00000433480 RIMBP3CA6NJZ7 1639 aa25.21■■□□□ 1.63
LINC00441-201ENST00000433480 RIMBP3BA6NNM3 1639 aa25.21■■□□□ 1.63
LINC00441-201ENST00000433480 RIMBP3Q9UFD9 1639 aa25.21■■□□□ 1.63
LINC00441-201ENST00000433480 DNMBPQ6XZF7 1577 aa25.17■■□□□ 1.62
LINC00441-201ENST00000433480 EIF4G3O43432 1585 aaKnown RBP25.15■■□□□ 1.62
LINC00441-201ENST00000433480 ARHGEF11O15085 1522 aa25.11■■□□□ 1.61
LINC00441-201ENST00000433480 TARBP1Q13395 1621 aaKnown RBP25.08■■□□□ 1.6
LINC00441-201ENST00000433480 AQRO60306 1485 aaKnown RBP eCLIP25.03■■□□□ 1.6
LINC00441-201ENST00000433480 POLA1P09884 1462 aaPredicted RBP25.01■■□□□ 1.59
LINC00441-201ENST00000433480 CHD1O14646 1710 aa25■■□□□ 1.59
LINC00441-201ENST00000433480 CYB5RLQ6IPT4 315 aa24.92■■□□□ 1.58
LINC00441-201ENST00000433480 RAD54L2Q9Y4B4 1467 aa24.9■■□□□ 1.58
LINC00441-201ENST00000433480 FBLN2P98095 1184 aa24.9■■□□□ 1.58
LINC00441-201ENST00000433480 SOGA1O94964 1423 aa24.89■■□□□ 1.58
LINC00441-201ENST00000433480 TDRD9Q8NDG6 1382 aaKnown RBP24.85■■□□□ 1.57
LINC00441-201ENST00000433480 ARAP1Q96P48 1450 aa24.84■■□□□ 1.57
LINC00441-201ENST00000433480 WDR97A6NE52 1622 aa24.83■■□□□ 1.56
LINC00441-201ENST00000433480 FGD5Q6ZNL6 1462 aa24.82■■□□□ 1.56
LINC00441-201ENST00000433480 SNAPC4Q5SXM2 1469 aa24.78■■□□□ 1.56
LINC00441-201ENST00000433480 CUX1P39880 1505 aa24.76■■□□□ 1.55
LINC00441-201ENST00000433480 CLASP1Q7Z460 1538 aa24.72■■□□□ 1.55
LINC00441-201ENST00000433480 MAGI1Q96QZ7 1491 aaPredicted RBP24.72■■□□□ 1.55
LINC00441-201ENST00000433480 TRHP20396 242 aaPredicted RBP24.71■■□□□ 1.55
LINC00441-201ENST00000433480 CHMP7Q8WUX9 453 aaPredicted RBP24.71■■□□□ 1.55
LINC00441-201ENST00000433480 GRIN2BQ13224 1484 aa24.7■■□□□ 1.55
LINC00441-201ENST00000433480 SYNJ1O43426 1573 aa24.69■■□□□ 1.54
LINC00441-201ENST00000433480 SYNJ2O15056 1496 aa24.64■■□□□ 1.53
LINC00441-201ENST00000433480 GAPVD1Q14C86 1478 aa24.58■■□□□ 1.53
LINC00441-201ENST00000433480 PBRM1Q86U86 1689 aa24.58■■□□□ 1.53
LINC00441-201ENST00000433480 ABCA10Q8WWZ4 1543 aa24.53■■□□□ 1.52
LINC00441-201ENST00000433480 ABCA5Q8WWZ7 1642 aa24.51■■□□□ 1.51
LINC00441-201ENST00000433480 WRNQ14191 1432 aaPredicted RBP eCLIP24.47■■□□□ 1.51
LINC00441-201ENST00000433480 GRIN2AQ12879 1464 aa24.38■■□□□ 1.49
LINC00441-201ENST00000433480 ADAMTS12P58397 1594 aa24.33■■□□□ 1.49
LINC00441-201ENST00000433480 BIVM-ERCC5R4GMW8 1640 aa24.33■■□□□ 1.49
LINC00441-201ENST00000433480 TOP2BQ02880 1626 aa24.32■■□□□ 1.48
LINC00441-201ENST00000433480 ERCC6L2Q5T890 1561 aa24.3■■□□□ 1.48
LINC00441-201ENST00000433480 NUP160Q12769 1436 aa24.3■■□□□ 1.48
LINC00441-201ENST00000433480 CEP170Q5SW79 1584 aa24.29■■□□□ 1.48
LINC00441-201ENST00000433480 FHAD1B1AJZ9 1412 aa24.27■■□□□ 1.48
LINC00441-201ENST00000433480 CHIC1Q5VXU3 224 aa24.23■■□□□ 1.47
LINC00441-201ENST00000433480 ERICH3Q5RHP9 1530 aa24.23■■□□□ 1.47
LINC00441-201ENST00000433480 SHROOM2Q13796 1616 aa24.22■■□□□ 1.47
LINC00441-201ENST00000433480 AEBP2Q6ZN18 517 aaPredicted RBP24.14■■□□□ 1.45
LINC00441-201ENST00000433480 PRG4Q92954 1404 aaPredicted RBP24.09■■□□□ 1.45
LINC00441-201ENST00000433480 JPH4Q96JJ6 628 aa24.05■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms