RNA–Protein interactions for RNA: ENST00000638500.1

LINC00334-203, long intergenic non-protein coding RNA 334, humanhuman

TSL 5 BASIC

Gene LINC00334, Length 1,377 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00334-203ENST00000638500 NISCHQ9Y2I1 1504 aa34.7■■■■□ 3.15
LINC00334-203ENST00000638500 CCDC180Q9P1Z9 1646 aa30.76■■■□□ 2.51
LINC00334-203ENST00000638500 ABCC9O60706 1549 aa30.25■■■□□ 2.43
LINC00334-203ENST00000638500 DCAF8L2P0C7V8 631 aa29.2■■■□□ 2.26
LINC00334-203ENST00000638500 RB1CC1Q8TDY2 1594 aa29.04■■■□□ 2.24
LINC00334-203ENST00000638500 NACADO15069 1562 aa28.99■■■□□ 2.23
LINC00334-203ENST00000638500 ZCCHC6Q5VYS8 1495 aaKnown RBP28.86■■■□□ 2.21
LINC00334-203ENST00000638500 MYO15BQ96JP2 1530 aa28.79■■■□□ 2.2
LINC00334-203ENST00000638500 DCAF1Q9Y4B6 1507 aa28.66■■■□□ 2.18
LINC00334-203ENST00000638500 PABPN1Q86U42 306 aaKnown RBP eCLIP28.34■■■□□ 2.13
LINC00334-203ENST00000638500 UNC13AQ9UPW8 1703 aa28.28■■■□□ 2.12
LINC00334-203ENST00000638500 SCRIBQ14160 1630 aa28.15■■■□□ 2.1
LINC00334-203ENST00000638500 BICRAQ9NZM4 1560 aa28.12■■■□□ 2.09
LINC00334-203ENST00000638500 DNAJC5BQ9UF47 199 aa27.82■■■□□ 2.04
LINC00334-203ENST00000638500 SHROOM4Q9ULL8 1493 aa27.81■■■□□ 2.04
LINC00334-203ENST00000638500 EIF4G1Q04637 1599 aaKnown RBP27.4■■□□□ 1.98
LINC00334-203ENST00000638500 CC2D2AQ9P2K1 1620 aa27.31■■□□□ 1.96
LINC00334-203ENST00000638500 CECR2Q9BXF3 1484 aa27.16■■□□□ 1.94
LINC00334-203ENST00000638500 SMARCA4P51532 1647 aa26.89■■□□□ 1.9
LINC00334-203ENST00000638500 BAZ1AQ9NRL2 1556 aaPredicted RBP26.88■■□□□ 1.89
LINC00334-203ENST00000638500 ATAD2BQ9ULI0 1458 aa26.8■■□□□ 1.88
LINC00334-203ENST00000638500 NCAPD3P42695 1498 aa26.78■■□□□ 1.88
LINC00334-203ENST00000638500 MROH2BQ7Z745 1585 aa26.75■■□□□ 1.87
LINC00334-203ENST00000638500 SMARCA2P51531 1590 aa26.74■■□□□ 1.87
LINC00334-203ENST00000638500 PEG3Q9GZU2 1588 aa26.6■■□□□ 1.85
LINC00334-203ENST00000638500 HMGXB3Q12766 1538 aa26.59■■□□□ 1.85
LINC00334-203ENST00000638500 BAZ1BQ9UIG0 1483 aaKnown RBP26.58■■□□□ 1.85
LINC00334-203ENST00000638500 RSF1Q96T23 1441 aaPredicted RBP26.47■■□□□ 1.83
LINC00334-203ENST00000638500 WIZO95785 1651 aa26.44■■□□□ 1.82
LINC00334-203ENST00000638500 TOP2AP11388 1531 aaKnown RBP26.15■■□□□ 1.78
LINC00334-203ENST00000638500 NESP48681 1621 aa26.15■■□□□ 1.78
LINC00334-203ENST00000638500 ERCC6Q03468 1493 aa26.08■■□□□ 1.77
LINC00334-203ENST00000638500 LAMC3Q9Y6N6 1575 aa26.04■■□□□ 1.76
LINC00334-203ENST00000638500 CADPSQ9ULU8 1353 aa26.04■■□□□ 1.76
LINC00334-203ENST00000638500 PDS5BQ9NTI5 1447 aa25.94■■□□□ 1.74
LINC00334-203ENST00000638500 SUPT5HO00267 1087 aaKnown RBP25.92■■□□□ 1.74
LINC00334-203ENST00000638500 CCDC88BA6NC98 1476 aa25.91■■□□□ 1.74
LINC00334-203ENST00000638500 CFTRP13569 1480 aa25.84■■□□□ 1.73
LINC00334-203ENST00000638500 KIF21AQ7Z4S6 1674 aa25.76■■□□□ 1.71
LINC00334-203ENST00000638500 CUX2O14529 1486 aa25.75■■□□□ 1.71
LINC00334-203ENST00000638500 FANCD2Q9BXW9 1451 aa25.72■■□□□ 1.71
LINC00334-203ENST00000638500 CEP164Q9UPV0 1460 aa25.67■■□□□ 1.7
LINC00334-203ENST00000638500 THOC2Q8NI27 1593 aaKnown RBP25.67■■□□□ 1.7
LINC00334-203ENST00000638500 MRC2Q9UBG0 1479 aa25.63■■□□□ 1.69
LINC00334-203ENST00000638500 PRDM2Q13029 1718 aa25.52■■□□□ 1.68
LINC00334-203ENST00000638500 WDR62O43379 1518 aa25.5■■□□□ 1.67
LINC00334-203ENST00000638500 URB2Q14146 1524 aaKnown RBP25.44■■□□□ 1.66
LINC00334-203ENST00000638500 ABCC8Q09428 1581 aa25.3■■□□□ 1.64
LINC00334-203ENST00000638500 TOPBP1Q92547 1522 aa25.29■■□□□ 1.64
LINC00334-203ENST00000638500 DNMBPQ6XZF7 1577 aa25.23■■□□□ 1.63
LINC00334-203ENST00000638500 IFT140Q96RY7 1462 aa25.14■■□□□ 1.62
LINC00334-203ENST00000638500 CUX1P39880 1505 aa25.09■■□□□ 1.61
LINC00334-203ENST00000638500 POLA1P09884 1462 aaPredicted RBP25.07■■□□□ 1.6
LINC00334-203ENST00000638500 DNAJC5Q9H3Z4 198 aa25.06■■□□□ 1.6
LINC00334-203ENST00000638500 ZNF608Q9ULD9 1512 aaPredicted RBP25.03■■□□□ 1.6
LINC00334-203ENST00000638500 SOGA1O94964 1423 aa25.03■■□□□ 1.6
LINC00334-203ENST00000638500 FGD5Q6ZNL6 1462 aa25.02■■□□□ 1.6
LINC00334-203ENST00000638500 RAD54L2Q9Y4B4 1467 aa25■■□□□ 1.59
LINC00334-203ENST00000638500 TARBP1Q13395 1621 aaKnown RBP24.97■■□□□ 1.59
LINC00334-203ENST00000638500 WRNQ14191 1432 aaPredicted RBP eCLIP24.96■■□□□ 1.59
LINC00334-203ENST00000638500 AQRO60306 1485 aaKnown RBP eCLIP24.93■■□□□ 1.58
LINC00334-203ENST00000638500 TDRD9Q8NDG6 1382 aaKnown RBP24.91■■□□□ 1.58
LINC00334-203ENST00000638500 EIF4G3O43432 1585 aaKnown RBP24.87■■□□□ 1.57
LINC00334-203ENST00000638500 TOP2BQ02880 1626 aa24.85■■□□□ 1.57
LINC00334-203ENST00000638500 SYNJ1O43426 1573 aa24.84■■□□□ 1.57
LINC00334-203ENST00000638500 BIVM-ERCC5R4GMW8 1640 aa24.82■■□□□ 1.56
LINC00334-203ENST00000638500 OSCARQ8IYS5 282 aa24.8■■□□□ 1.56
LINC00334-203ENST00000638500 ABCA10Q8WWZ4 1543 aa24.76■■□□□ 1.55
LINC00334-203ENST00000638500 WDR97A6NE52 1622 aa24.74■■□□□ 1.55
LINC00334-203ENST00000638500 FBLN2P98095 1184 aa24.72■■□□□ 1.55
LINC00334-203ENST00000638500 GAPVD1Q14C86 1478 aa24.71■■□□□ 1.55
LINC00334-203ENST00000638500 GRIN2BQ13224 1484 aa24.7■■□□□ 1.55
LINC00334-203ENST00000638500 SNAPC4Q5SXM2 1469 aa24.66■■□□□ 1.54
LINC00334-203ENST00000638500 CHMP7Q8WUX9 453 aaPredicted RBP24.63■■□□□ 1.53
LINC00334-203ENST00000638500 ABCA5Q8WWZ7 1642 aa24.61■■□□□ 1.53
LINC00334-203ENST00000638500 MAGI1Q96QZ7 1491 aaPredicted RBP24.61■■□□□ 1.53
LINC00334-203ENST00000638500 PBRM1Q86U86 1689 aa24.56■■□□□ 1.52
LINC00334-203ENST00000638500 CHD1O14646 1710 aa24.54■■□□□ 1.52
LINC00334-203ENST00000638500 SYNJ2O15056 1496 aa24.53■■□□□ 1.52
LINC00334-203ENST00000638500 TRIM41Q8WV44 630 aa24.47■■□□□ 1.51
LINC00334-203ENST00000638500 ERICH3Q5RHP9 1530 aa24.46■■□□□ 1.51
LINC00334-203ENST00000638500 KIF27Q86VH2 1401 aa24.45■■□□□ 1.5
LINC00334-203ENST00000638500 FHAD1B1AJZ9 1412 aa24.43■■□□□ 1.5
LINC00334-203ENST00000638500 ADAMTS12P58397 1594 aa24.39■■□□□ 1.49
LINC00334-203ENST00000638500 IGF1RP08069 1367 aa24.38■■□□□ 1.49
LINC00334-203ENST00000638500 GRIN2AQ12879 1464 aa24.36■■□□□ 1.49
LINC00334-203ENST00000638500 CLASP1Q7Z460 1538 aa24.3■■□□□ 1.48
LINC00334-203ENST00000638500 ARHGEF11O15085 1522 aa24.29■■□□□ 1.48
LINC00334-203ENST00000638500 RIMBP3CA6NJZ7 1639 aa24.27■■□□□ 1.48
LINC00334-203ENST00000638500 RIMBP3BA6NNM3 1639 aa24.27■■□□□ 1.48
LINC00334-203ENST00000638500 RIMBP3Q9UFD9 1639 aa24.27■■□□□ 1.48
LINC00334-203ENST00000638500 NUP160Q12769 1436 aa24.24■■□□□ 1.47
LINC00334-203ENST00000638500 CARMIL1Q5VZK9 1371 aa24.24■■□□□ 1.47
LINC00334-203ENST00000638500 RUSC2Q8N2Y8 1516 aa24.23■■□□□ 1.47
LINC00334-203ENST00000638500 CEP170Q5SW79 1584 aa24.21■■□□□ 1.47
LINC00334-203ENST00000638500 CUL7Q14999 1698 aa24.2■■□□□ 1.47
LINC00334-203ENST00000638500 CYB5RLQ6IPT4 315 aa24.19■■□□□ 1.46
LINC00334-203ENST00000638500 CHIC1Q5VXU3 224 aa24.15■■□□□ 1.46
LINC00334-203ENST00000638500 JPH4Q96JJ6 628 aa24.11■■□□□ 1.45
LINC00334-203ENST00000638500 ARAP1Q96P48 1450 aa24.09■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms