RNA–Protein interactions for RNA: ENST00000571088.5

TRPV1-206, Transcript of transient receptor potential cation channel subfamily V member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRPV1, Length 4,105 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPV1-206ENST00000571088 NISCHQ9Y2I1 1504 aa25.08■■□□□ 1.61
TRPV1-206ENST00000571088 DCAF8L2P0C7V8 631 aa22.54■■□□□ 1.2
TRPV1-206ENST00000571088 SUPT5HO00267 1087 aaKnown RBP22.54■■□□□ 1.2
TRPV1-206ENST00000571088 SHROOM4Q9ULL8 1493 aa22.53■■□□□ 1.2
TRPV1-206ENST00000571088 PCGF6Q9BYE7 350 aa21.97■■□□□ 1.11
TRPV1-206ENST00000571088 PELP1Q8IZL8 1130 aaKnown RBP21.62■■□□□ 1.05
TRPV1-206ENST00000571088 HRCP23327 699 aa21.61■■□□□ 1.05
TRPV1-206ENST00000571088 EHMT2Q96KQ7 1210 aa21.38■■□□□ 1.01
TRPV1-206ENST00000571088 CHIC1Q5VXU3 224 aa21.32■■□□□ 1
TRPV1-206ENST00000571088 PPARGC1BQ86YN6 1023 aaKnown RBP21.29■■□□□ 1
TRPV1-206ENST00000571088 ZEB1P37275 1124 aaPredicted RBP21.17■□□□□ 0.98
TRPV1-206ENST00000571088 ZCCHC6Q5VYS8 1495 aaKnown RBP21.09■□□□□ 0.97
TRPV1-206ENST00000571088 FAM9AQ8IZU1 332 aaPredicted RBP21.06■□□□□ 0.96
TRPV1-206ENST00000571088 CENPBP07199 599 aaPredicted RBP21.04■□□□□ 0.96
TRPV1-206ENST00000571088 MYT1Q01538 1121 aa21.03■□□□□ 0.96
TRPV1-206ENST00000571088 TRIM41Q8WV44 630 aa20.97■□□□□ 0.95
TRPV1-206ENST00000571088 TRIM26Q12899 539 aaPredicted RBP20.93■□□□□ 0.94
TRPV1-206ENST00000571088 CCDC180Q9P1Z9 1646 aa20.9■□□□□ 0.94
TRPV1-206ENST00000571088 LOC105371045A0A1W2PR82 267 aa20.88■□□□□ 0.93
TRPV1-206ENST00000571088 CCER1Q8TC90 406 aaPredicted RBP20.84■□□□□ 0.93
TRPV1-206ENST00000571088 TTBK1Q5TCY1 1321 aaPredicted RBP20.81■□□□□ 0.92
TRPV1-206ENST00000571088 YTHDC1Q96MU7 727 aaKnown RBP20.67■□□□□ 0.9
TRPV1-206ENST00000571088 MYO15BQ96JP2 1530 aa20.57■□□□□ 0.88
TRPV1-206ENST00000571088 DCAF1Q9Y4B6 1507 aa20.5■□□□□ 0.87
TRPV1-206ENST00000571088 APLP2Q06481 763 aa20.36■□□□□ 0.85
TRPV1-206ENST00000571088 GTF3C3Q9Y5Q9 886 aa20.35■□□□□ 0.85
TRPV1-206ENST00000571088 DIEXFQ68CQ4 756 aaKnown RBP20.29■□□□□ 0.84
TRPV1-206ENST00000571088 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.29■□□□□ 0.84
TRPV1-206ENST00000571088 UBTFP17480 764 aaKnown RBP20.21■□□□□ 0.83
TRPV1-206ENST00000571088 SCAF1Q9H7N4 1312 aaKnown RBP20.21■□□□□ 0.83
TRPV1-206ENST00000571088 ACIN1Q9UKV3 1341 aaKnown RBP20.2■□□□□ 0.82
TRPV1-206ENST00000571088 SCRIBQ14160 1630 aa20.15■□□□□ 0.82
TRPV1-206ENST00000571088 ERICH6Q7L0X2 663 aa20.15■□□□□ 0.82
TRPV1-206ENST00000571088 ABCC9O60706 1549 aa20.08■□□□□ 0.81
TRPV1-206ENST00000571088 RANGAP1P46060 587 aaPredicted RBP20.05■□□□□ 0.8
TRPV1-206ENST00000571088 RSF1Q96T23 1441 aaPredicted RBP20.04■□□□□ 0.8
TRPV1-206ENST00000571088 NEFLP07196 543 aa19.99■□□□□ 0.79
TRPV1-206ENST00000571088 NEUROD1Q13562 356 aa19.98■□□□□ 0.79
TRPV1-206ENST00000571088 HNRNPUL2Q1KMD3 747 aaKnown RBP19.88■□□□□ 0.77
TRPV1-206ENST00000571088 RB1CC1Q8TDY2 1594 aa19.8■□□□□ 0.76
TRPV1-206ENST00000571088 ZNF316A6NFI3 1004 aaPredicted RBP19.75■□□□□ 0.75
TRPV1-206ENST00000571088 CSRNP3Q8WYN3 585 aa19.69■□□□□ 0.74
TRPV1-206ENST00000571088 NACADO15069 1562 aa19.67■□□□□ 0.74
TRPV1-206ENST00000571088 BCANQ96GW7 911 aa19.63■□□□□ 0.73
TRPV1-206ENST00000571088 CECR2Q9BXF3 1484 aa19.58■□□□□ 0.73
TRPV1-206ENST00000571088 PABPN1Q86U42 306 aaKnown RBP eCLIP19.56■□□□□ 0.723e-7■■■■□ 25.8
TRPV1-206ENST00000571088 ITGAEP38570 1179 aa19.53■□□□□ 0.72
TRPV1-206ENST00000571088 MROH2BQ7Z745 1585 aa19.47■□□□□ 0.71
TRPV1-206ENST00000571088 ATP1B4Q9UN42 357 aaPredicted RBP19.45■□□□□ 0.7
TRPV1-206ENST00000571088 BAZ1AQ9NRL2 1556 aaPredicted RBP19.44■□□□□ 0.7
TRPV1-206ENST00000571088 EEA1Q15075 1411 aa19.43■□□□□ 0.7
TRPV1-206ENST00000571088 CEP162Q5TB80 1403 aa19.43■□□□□ 0.7
TRPV1-206ENST00000571088 MIER1Q8N108 512 aa19.38■□□□□ 0.69
TRPV1-206ENST00000571088 TNIKQ9UKE5 1360 aa19.36■□□□□ 0.69
TRPV1-206ENST00000571088 GOLGA3Q08378 1498 aa19.3■□□□□ 0.68
TRPV1-206ENST00000571088 WIZO95785 1651 aa19.29■□□□□ 0.68
TRPV1-206ENST00000571088 CLSPNQ9HAW4 1339 aa19.25■□□□□ 0.67
TRPV1-206ENST00000571088 CLIP1P30622 1438 aa19.23■□□□□ 0.67
TRPV1-206ENST00000571088 WRNQ14191 1432 aaPredicted RBP eCLIP19.22■□□□□ 0.67
TRPV1-206ENST00000571088 FKBP8Q14318 412 aa19.2■□□□□ 0.66
TRPV1-206ENST00000571088 SOGA1O94964 1423 aa19.19■□□□□ 0.66
TRPV1-206ENST00000571088 RTL5Q5HYW3 569 aaPredicted RBP19.19■□□□□ 0.66
TRPV1-206ENST00000571088 CCDC88BA6NC98 1476 aa19.18■□□□□ 0.66
TRPV1-206ENST00000571088 ABCC8Q09428 1581 aa19.17■□□□□ 0.66
TRPV1-206ENST00000571088 CDK11AQ9UQ88 783 aaPredicted RBP19.16■□□□□ 0.66
TRPV1-206ENST00000571088 CEP164Q9UPV0 1460 aa19.14■□□□□ 0.66
TRPV1-206ENST00000571088 ANP32EQ9BTT0 268 aa19.14■□□□□ 0.65
TRPV1-206ENST00000571088 TOP2AP11388 1531 aaKnown RBP19.13■□□□□ 0.65
TRPV1-206ENST00000571088 CNGB1Q14028 1251 aaPredicted RBP19.1■□□□□ 0.65
TRPV1-206ENST00000571088 ANP32CO43423 234 aa19.08■□□□□ 0.64
TRPV1-206ENST00000571088 FAM50AQ14320 339 aaKnown RBP19.06■□□□□ 0.64
TRPV1-206ENST00000571088 POLR3GLQ9BT43 218 aa19.02■□□□□ 0.63
TRPV1-206ENST00000571088 DAXXQ9UER7 740 aaPredicted RBP19■□□□□ 0.63
TRPV1-206ENST00000571088 BCL11AQ9H165 835 aa18.99■□□□□ 0.63
TRPV1-206ENST00000571088 BAZ1BQ9UIG0 1483 aaKnown RBP18.97■□□□□ 0.63
TRPV1-206ENST00000571088 SUPT16HQ9Y5B9 1047 aaKnown RBP18.96■□□□□ 0.63
TRPV1-206ENST00000571088 SMARCA4P51532 1647 aa18.96■□□□□ 0.63
TRPV1-206ENST00000571088 DDX10Q13206 875 aaKnown RBP18.94■□□□□ 0.62
TRPV1-206ENST00000571088 VPS8Q8N3P4 1428 aa18.93■□□□□ 0.62
TRPV1-206ENST00000571088 TRIM52Q96A61 297 aa18.93■□□□□ 0.62
TRPV1-206ENST00000571088 SMARCA2P51531 1590 aa18.87■□□□□ 0.61
TRPV1-206ENST00000571088 RUSC2Q8N2Y8 1516 aa18.86■□□□□ 0.61
TRPV1-206ENST00000571088 P3H3Q8IVL6 736 aa18.81■□□□□ 0.6
TRPV1-206ENST00000571088 HNRNPUQ00839 825 aaKnown RBP eCLIP18.8■□□□□ 0.6
TRPV1-206ENST00000571088 KIF27Q86VH2 1401 aa18.79■□□□□ 0.6
TRPV1-206ENST00000571088 NBR1Q14596 966 aa18.78■□□□□ 0.6
TRPV1-206ENST00000571088 ANP32AP39687 249 aaKnown RBP18.76■□□□□ 0.59
TRPV1-206ENST00000571088 IRX6P78412 446 aaPredicted RBP18.76■□□□□ 0.59
TRPV1-206ENST00000571088 MYT1LQ9UL68 1186 aa18.76■□□□□ 0.59
TRPV1-206ENST00000571088 TSHZ2Q9NRE2 1034 aa18.73■□□□□ 0.59
TRPV1-206ENST00000571088 HIRIP3Q9BW71 556 aaPredicted RBP18.69■□□□□ 0.58
TRPV1-206ENST00000571088 RAPGEF2Q9Y4G8 1499 aa18.69■□□□□ 0.58
TRPV1-206ENST00000571088 CCNB3Q8WWL7 1395 aa18.68■□□□□ 0.58
TRPV1-206ENST00000571088 EIF5BO60841 1220 aaKnown RBP18.66■□□□□ 0.58
TRPV1-206ENST00000571088 NPM2Q86SE8 214 aaKnown RBP18.66■□□□□ 0.58
TRPV1-206ENST00000571088 TONSLQ96HA7 1378 aa18.65■□□□□ 0.58
TRPV1-206ENST00000571088 ATAD2BQ9ULI0 1458 aa18.64■□□□□ 0.58
TRPV1-206ENST00000571088 KANK4Q5T7N3 995 aaPredicted RBP18.64■□□□□ 0.57
TRPV1-206ENST00000571088 RBM19Q9Y4C8 960 aaKnown RBP18.63■□□□□ 0.57
TRPV1-206ENST00000571088 FAM9BQ8IZU0 186 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms