RNA–Protein interactions for RNA: ENST00000249377.4

LRRC17-201, Transcript of leucine rich repeat containing 17, humanhuman

TSL 1 (best) BASIC

Gene LRRC17, Length 2,002 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC17-201ENST00000249377 NISCHQ9Y2I1 1504 aa27.45■■□□□ 1.99
LRRC17-201ENST00000249377 CCDC180Q9P1Z9 1646 aa24.25■■□□□ 1.47
LRRC17-201ENST00000249377 ABCC9O60706 1549 aa23.59■■□□□ 1.37
LRRC17-201ENST00000249377 SHROOM4Q9ULL8 1493 aa23.29■■□□□ 1.32
LRRC17-201ENST00000249377 ZCCHC6Q5VYS8 1495 aaKnown RBP23.12■■□□□ 1.29
LRRC17-201ENST00000249377 DCAF8L2P0C7V8 631 aa23.1■■□□□ 1.29
LRRC17-201ENST00000249377 SUPT5HO00267 1087 aaKnown RBP23.01■■□□□ 1.27
LRRC17-201ENST00000249377 MYO15BQ96JP2 1530 aa22.77■■□□□ 1.24
LRRC17-201ENST00000249377 HRCP23327 699 aa22.74■■□□□ 1.23
LRRC17-201ENST00000249377 RB1CC1Q8TDY2 1594 aa22.72■■□□□ 1.23
LRRC17-201ENST00000249377 NACADO15069 1562 aa22.71■■□□□ 1.23
LRRC17-201ENST00000249377 CHIC1Q5VXU3 224 aa22.69■■□□□ 1.22
LRRC17-201ENST00000249377 DCAF1Q9Y4B6 1507 aa22.61■■□□□ 1.21
LRRC17-201ENST00000249377 PCGF6Q9BYE7 350 aa22.34■■□□□ 1.17
LRRC17-201ENST00000249377 UNC13AQ9UPW8 1703 aa22.33■■□□□ 1.17
LRRC17-201ENST00000249377 SCRIBQ14160 1630 aa22.3■■□□□ 1.16
LRRC17-201ENST00000249377 PABPN1Q86U42 306 aaKnown RBP eCLIP22.14■■□□□ 1.13
LRRC17-201ENST00000249377 PPARGC1BQ86YN6 1023 aaKnown RBP22.09■■□□□ 1.13
LRRC17-201ENST00000249377 BICRAQ9NZM4 1560 aa22.01■■□□□ 1.11
LRRC17-201ENST00000249377 LOC105371045A0A1W2PR82 267 aa21.96■■□□□ 1.11
LRRC17-201ENST00000249377 TRIM26Q12899 539 aaPredicted RBP21.9■■□□□ 1.1
LRRC17-201ENST00000249377 ZEB1P37275 1124 aaPredicted RBP21.65■■□□□ 1.06
LRRC17-201ENST00000249377 RSF1Q96T23 1441 aaPredicted RBP21.64■■□□□ 1.06
LRRC17-201ENST00000249377 TRIM41Q8WV44 630 aa21.46■■□□□ 1.03
LRRC17-201ENST00000249377 EIF4G1Q04637 1599 aaKnown RBP21.43■■□□□ 1.02
LRRC17-201ENST00000249377 CECR2Q9BXF3 1484 aa21.43■■□□□ 1.02
LRRC17-201ENST00000249377 DNAJC5BQ9UF47 199 aa21.36■■□□□ 1.01
LRRC17-201ENST00000249377 PELP1Q8IZL8 1130 aaKnown RBP21.34■■□□□ 1.01
LRRC17-201ENST00000249377 CC2D2AQ9P2K1 1620 aa21.31■■□□□ 1
LRRC17-201ENST00000249377 SMARCA4P51532 1647 aa21.27■■□□□ 1
LRRC17-201ENST00000249377 BAZ1AQ9NRL2 1556 aaPredicted RBP21.26■□□□□ 0.99
LRRC17-201ENST00000249377 MROH2BQ7Z745 1585 aa21.22■□□□□ 0.99
LRRC17-201ENST00000249377 FAM9AQ8IZU1 332 aaPredicted RBP21.22■□□□□ 0.99
LRRC17-201ENST00000249377 SCAF1Q9H7N4 1312 aaKnown RBP21.19■□□□□ 0.98
LRRC17-201ENST00000249377 WIZO95785 1651 aa21.08■□□□□ 0.96
LRRC17-201ENST00000249377 ATAD2BQ9ULI0 1458 aa21.05■□□□□ 0.96
LRRC17-201ENST00000249377 SMARCA2P51531 1590 aa21.03■□□□□ 0.96
LRRC17-201ENST00000249377 EHMT2Q96KQ7 1210 aa20.95■□□□□ 0.94
LRRC17-201ENST00000249377 PEG3Q9GZU2 1588 aa20.95■□□□□ 0.94
LRRC17-201ENST00000249377 NCAPD3P42695 1498 aa20.93■□□□□ 0.94
LRRC17-201ENST00000249377 BAZ1BQ9UIG0 1483 aaKnown RBP20.93■□□□□ 0.94
LRRC17-201ENST00000249377 WRNQ14191 1432 aaPredicted RBP eCLIP20.88■□□□□ 0.93
LRRC17-201ENST00000249377 ACIN1Q9UKV3 1341 aaKnown RBP20.87■□□□□ 0.93
LRRC17-201ENST00000249377 HMGXB3Q12766 1538 aa20.86■□□□□ 0.93
LRRC17-201ENST00000249377 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.86■□□□□ 0.93
LRRC17-201ENST00000249377 CCER1Q8TC90 406 aaPredicted RBP20.84■□□□□ 0.93
LRRC17-201ENST00000249377 TOP2AP11388 1531 aaKnown RBP20.77■□□□□ 0.91
LRRC17-201ENST00000249377 NEUROD1Q13562 356 aa20.76■□□□□ 0.91
LRRC17-201ENST00000249377 DIEXFQ68CQ4 756 aaKnown RBP20.71■□□□□ 0.91
LRRC17-201ENST00000249377 CCDC88BA6NC98 1476 aa20.7■□□□□ 0.9
LRRC17-201ENST00000249377 ABCC8Q09428 1581 aa20.7■□□□□ 0.9
LRRC17-201ENST00000249377 CEP162Q5TB80 1403 aa20.7■□□□□ 0.9
LRRC17-201ENST00000249377 TNIKQ9UKE5 1360 aa20.66■□□□□ 0.9
LRRC17-201ENST00000249377 CENPBP07199 599 aaPredicted RBP20.65■□□□□ 0.9
LRRC17-201ENST00000249377 EEA1Q15075 1411 aa20.62■□□□□ 0.89
LRRC17-201ENST00000249377 GTF3C3Q9Y5Q9 886 aa20.58■□□□□ 0.88
LRRC17-201ENST00000249377 SOGA1O94964 1423 aa20.57■□□□□ 0.88
LRRC17-201ENST00000249377 NESP48681 1621 aa20.5■□□□□ 0.87
LRRC17-201ENST00000249377 GOLGA3Q08378 1498 aa20.47■□□□□ 0.87
LRRC17-201ENST00000249377 ZNF316A6NFI3 1004 aaPredicted RBP20.47■□□□□ 0.87
LRRC17-201ENST00000249377 CSRNP3Q8WYN3 585 aa20.46■□□□□ 0.87
LRRC17-201ENST00000249377 RUSC2Q8N2Y8 1516 aa20.45■□□□□ 0.86
LRRC17-201ENST00000249377 TTBK1Q5TCY1 1321 aaPredicted RBP20.42■□□□□ 0.86
LRRC17-201ENST00000249377 MYT1Q01538 1121 aa20.42■□□□□ 0.86
LRRC17-201ENST00000249377 CADPSQ9ULU8 1353 aa20.39■□□□□ 0.86
LRRC17-201ENST00000249377 LAMC3Q9Y6N6 1575 aa20.38■□□□□ 0.85
LRRC17-201ENST00000249377 KIF21BO75037 1637 aa20.36■□□□□ 0.85
LRRC17-201ENST00000249377 UBTFP17480 764 aaKnown RBP20.34■□□□□ 0.85
LRRC17-201ENST00000249377 CEP164Q9UPV0 1460 aa20.31■□□□□ 0.84
LRRC17-201ENST00000249377 CFTRP13569 1480 aa20.31■□□□□ 0.84
LRRC17-201ENST00000249377 ERCC6Q03468 1493 aa20.3■□□□□ 0.84
LRRC17-201ENST00000249377 PRDM2Q13029 1718 aa20.29■□□□□ 0.84
LRRC17-201ENST00000249377 KIF21AQ7Z4S6 1674 aa20.29■□□□□ 0.84
LRRC17-201ENST00000249377 PDS5BQ9NTI5 1447 aa20.24■□□□□ 0.83
LRRC17-201ENST00000249377 SYNJ1O43426 1573 aa20.24■□□□□ 0.83
LRRC17-201ENST00000249377 VPS8Q8N3P4 1428 aa20.22■□□□□ 0.83
LRRC17-201ENST00000249377 CLIP1P30622 1438 aa20.21■□□□□ 0.83
LRRC17-201ENST00000249377 MIER1Q8N108 512 aa20.2■□□□□ 0.82
LRRC17-201ENST00000249377 FANCD2Q9BXW9 1451 aa20.2■□□□□ 0.82
LRRC17-201ENST00000249377 YTHDC1Q96MU7 727 aaKnown RBP20.15■□□□□ 0.82
LRRC17-201ENST00000249377 HNRNPUL2Q1KMD3 747 aaKnown RBP20.14■□□□□ 0.81
LRRC17-201ENST00000249377 RAPGEF2Q9Y4G8 1499 aa20.07■□□□□ 0.8
LRRC17-201ENST00000249377 CLSPNQ9HAW4 1339 aa20.05■□□□□ 0.8
LRRC17-201ENST00000249377 THOC2Q8NI27 1593 aaKnown RBP20.04■□□□□ 0.8
LRRC17-201ENST00000249377 MRC2Q9UBG0 1479 aa20.02■□□□□ 0.8
LRRC17-201ENST00000249377 APLP2Q06481 763 aa20■□□□□ 0.79
LRRC17-201ENST00000249377 TOP2BQ02880 1626 aa19.98■□□□□ 0.79
LRRC17-201ENST00000249377 URB2Q14146 1524 aaKnown RBP19.97■□□□□ 0.79
LRRC17-201ENST00000249377 ERICH3Q5RHP9 1530 aa19.96■□□□□ 0.79
LRRC17-201ENST00000249377 DHX57Q6P158 1386 aaKnown RBP19.96■□□□□ 0.79
LRRC17-201ENST00000249377 BIVM-ERCC5R4GMW8 1640 aa19.93■□□□□ 0.78
LRRC17-201ENST00000249377 WDR62O43379 1518 aa19.92■□□□□ 0.78
LRRC17-201ENST00000249377 TOPBP1Q92547 1522 aa19.9■□□□□ 0.78
LRRC17-201ENST00000249377 DNMBPQ6XZF7 1577 aa19.89■□□□□ 0.78
LRRC17-201ENST00000249377 ARAP1Q96P48 1450 aa19.89■□□□□ 0.78
LRRC17-201ENST00000249377 PRXQ9BXM0 1461 aa19.88■□□□□ 0.77
LRRC17-201ENST00000249377 CUX1P39880 1505 aa19.88■□□□□ 0.77
LRRC17-201ENST00000249377 CUX2O14529 1486 aa19.85■□□□□ 0.77
LRRC17-201ENST00000249377 RRBP1Q9P2E9 1410 aaKnown RBP19.85■□□□□ 0.77
LRRC17-201ENST00000249377 FGD5Q6ZNL6 1462 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms