RNA–Protein interactions for RNA: ENST00000296446.12

PRKAR2A-202, Transcript of protein kinase cAMP-dependent type II regulatory subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PRKAR2A, Length 3,318 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAR2A-202ENST00000296446 NISCHQ9Y2I1 1504 aa28.22■■■□□ 2.11
PRKAR2A-202ENST00000296446 SHROOM4Q9ULL8 1493 aa25.29■■□□□ 1.64
PRKAR2A-202ENST00000296446 DCAF8L2P0C7V8 631 aa25.29■■□□□ 1.64
PRKAR2A-202ENST00000296446 SUPT5HO00267 1087 aaKnown RBP24.81■■□□□ 1.56
PRKAR2A-202ENST00000296446 ZCCHC6Q5VYS8 1495 aaKnown RBP23.67■■□□□ 1.38
PRKAR2A-202ENST00000296446 EHMT2Q96KQ7 1210 aa23.45■■□□□ 1.34
PRKAR2A-202ENST00000296446 CCDC180Q9P1Z9 1646 aa23.45■■□□□ 1.34
PRKAR2A-202ENST00000296446 CHIC1Q5VXU3 224 aa23.35■■□□□ 1.33
PRKAR2A-202ENST00000296446 ABCC9O60706 1549 aa23.27■■□□□ 1.32
PRKAR2A-202ENST00000296446 FAM9AQ8IZU1 332 aaPredicted RBP23.16■■□□□ 1.3
PRKAR2A-202ENST00000296446 LOC105371045A0A1W2PR82 267 aa23.15■■□□□ 1.3
PRKAR2A-202ENST00000296446 MYO15BQ96JP2 1530 aa22.99■■□□□ 1.27
PRKAR2A-202ENST00000296446 PCGF6Q9BYE7 350 aa22.98■■□□□ 1.27
PRKAR2A-202ENST00000296446 SCRIBQ14160 1630 aa22.92■■□□□ 1.26
PRKAR2A-202ENST00000296446 TRIM41Q8WV44 630 aa22.77■■□□□ 1.24
PRKAR2A-202ENST00000296446 HRCP23327 699 aa22.65■■□□□ 1.22
PRKAR2A-202ENST00000296446 PABPN1Q86U42 306 aaKnown RBP eCLIP22.65■■□□□ 1.22
PRKAR2A-202ENST00000296446 PPARGC1BQ86YN6 1023 aaKnown RBP22.61■■□□□ 1.21
PRKAR2A-202ENST00000296446 DCAF1Q9Y4B6 1507 aa22.55■■□□□ 1.2
PRKAR2A-202ENST00000296446 TTBK1Q5TCY1 1321 aaPredicted RBP22.53■■□□□ 1.2
PRKAR2A-202ENST00000296446 RSF1Q96T23 1441 aaPredicted RBP22.51■■□□□ 1.19
PRKAR2A-202ENST00000296446 CECR2Q9BXF3 1484 aa22.46■■□□□ 1.19
PRKAR2A-202ENST00000296446 RB1CC1Q8TDY2 1594 aa22.21■■□□□ 1.15
PRKAR2A-202ENST00000296446 RANGAP1P46060 587 aaPredicted RBP22.2■■□□□ 1.14
PRKAR2A-202ENST00000296446 MROH2BQ7Z745 1585 aa22.16■■□□□ 1.14
PRKAR2A-202ENST00000296446 NACADO15069 1562 aa22.08■■□□□ 1.12
PRKAR2A-202ENST00000296446 TRIM26Q12899 539 aaPredicted RBP22.05■■□□□ 1.12
PRKAR2A-202ENST00000296446 WIZO95785 1651 aa21.98■■□□□ 1.11
PRKAR2A-202ENST00000296446 UBTFP17480 764 aaKnown RBP21.95■■□□□ 1.1
PRKAR2A-202ENST00000296446 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.73■■□□□ 1.07
PRKAR2A-202ENST00000296446 ABCC8Q09428 1581 aa21.71■■□□□ 1.07
PRKAR2A-202ENST00000296446 BAZ1AQ9NRL2 1556 aaPredicted RBP21.65■■□□□ 1.06
PRKAR2A-202ENST00000296446 CCDC88BA6NC98 1476 aa21.62■■□□□ 1.05
PRKAR2A-202ENST00000296446 CCER1Q8TC90 406 aaPredicted RBP21.62■■□□□ 1.05
PRKAR2A-202ENST00000296446 SOGA1O94964 1423 aa21.57■■□□□ 1.04
PRKAR2A-202ENST00000296446 SCAF1Q9H7N4 1312 aaKnown RBP21.55■■□□□ 1.04
PRKAR2A-202ENST00000296446 PELP1Q8IZL8 1130 aaKnown RBP21.54■■□□□ 1.04
PRKAR2A-202ENST00000296446 CSRNP3Q8WYN3 585 aa21.54■■□□□ 1.04
PRKAR2A-202ENST00000296446 RUSC2Q8N2Y8 1516 aa21.46■■□□□ 1.03
PRKAR2A-202ENST00000296446 HNRNPUL2Q1KMD3 747 aaKnown RBP21.45■■□□□ 1.03
PRKAR2A-202ENST00000296446 SMARCA4P51532 1647 aa21.44■■□□□ 1.02
PRKAR2A-202ENST00000296446 APLP2Q06481 763 aa21.37■■□□□ 1.01
PRKAR2A-202ENST00000296446 TOP2AP11388 1531 aaKnown RBP21.35■■□□□ 1.01
PRKAR2A-202ENST00000296446 UNC13AQ9UPW8 1703 aa21.31■■□□□ 1
PRKAR2A-202ENST00000296446 SMARCA2P51531 1590 aa21.3■■□□□ 1
PRKAR2A-202ENST00000296446 WRNQ14191 1432 aaPredicted RBP eCLIP21.28■■□□□ 1
PRKAR2A-202ENST00000296446 ZEB1P37275 1124 aaPredicted RBP21.27■■□□□ 1
PRKAR2A-202ENST00000296446 BAZ1BQ9UIG0 1483 aaKnown RBP21.27■■□□□ 1
PRKAR2A-202ENST00000296446 ATP1B4Q9UN42 357 aaPredicted RBP21.27■□□□□ 0.99
PRKAR2A-202ENST00000296446 CEP162Q5TB80 1403 aa21.26■□□□□ 0.99
PRKAR2A-202ENST00000296446 BICRAQ9NZM4 1560 aa21.25■□□□□ 0.99
PRKAR2A-202ENST00000296446 ITGAEP38570 1179 aa21.22■□□□□ 0.99
PRKAR2A-202ENST00000296446 ATAD2BQ9ULI0 1458 aa21.18■□□□□ 0.98
PRKAR2A-202ENST00000296446 P3H3Q8IVL6 736 aa21.09■□□□□ 0.97
PRKAR2A-202ENST00000296446 TNIKQ9UKE5 1360 aa21.03■□□□□ 0.96
PRKAR2A-202ENST00000296446 NEUROD1Q13562 356 aa21■□□□□ 0.95
PRKAR2A-202ENST00000296446 CLIP1P30622 1438 aa20.98■□□□□ 0.95
PRKAR2A-202ENST00000296446 YTHDC1Q96MU7 727 aaKnown RBP20.97■□□□□ 0.95
PRKAR2A-202ENST00000296446 GOLGA3Q08378 1498 aa20.96■□□□□ 0.95
PRKAR2A-202ENST00000296446 EIF4G1Q04637 1599 aaKnown RBP20.94■□□□□ 0.94
PRKAR2A-202ENST00000296446 SYNJ1O43426 1573 aa20.93■□□□□ 0.94
PRKAR2A-202ENST00000296446 RAPGEF2Q9Y4G8 1499 aa20.93■□□□□ 0.94
PRKAR2A-202ENST00000296446 ACIN1Q9UKV3 1341 aaKnown RBP20.92■□□□□ 0.94
PRKAR2A-202ENST00000296446 GTF3C3Q9Y5Q9 886 aa20.89■□□□□ 0.93
PRKAR2A-202ENST00000296446 DIEXFQ68CQ4 756 aaKnown RBP20.86■□□□□ 0.93
PRKAR2A-202ENST00000296446 EEA1Q15075 1411 aa20.83■□□□□ 0.92
PRKAR2A-202ENST00000296446 KANK4Q5T7N3 995 aaPredicted RBP20.83■□□□□ 0.92
PRKAR2A-202ENST00000296446 DNAJC5BQ9UF47 199 aa20.83■□□□□ 0.92
PRKAR2A-202ENST00000296446 CEP164Q9UPV0 1460 aa20.82■□□□□ 0.92
PRKAR2A-202ENST00000296446 ARID3CA6NKF2 412 aa20.77■□□□□ 0.92
PRKAR2A-202ENST00000296446 FAM50AQ14320 339 aaKnown RBP20.71■□□□□ 0.91
PRKAR2A-202ENST00000296446 CUX2O14529 1486 aa20.64■□□□□ 0.9
PRKAR2A-202ENST00000296446 KIF27Q86VH2 1401 aa20.63■□□□□ 0.89
PRKAR2A-202ENST00000296446 VPS8Q8N3P4 1428 aa20.62■□□□□ 0.89
PRKAR2A-202ENST00000296446 NCAPD3P42695 1498 aa20.61■□□□□ 0.89
PRKAR2A-202ENST00000296446 CENPBP07199 599 aaPredicted RBP20.61■□□□□ 0.89
PRKAR2A-202ENST00000296446 PEG3Q9GZU2 1588 aa20.61■□□□□ 0.89
PRKAR2A-202ENST00000296446 ZNF316A6NFI3 1004 aaPredicted RBP20.58■□□□□ 0.88
PRKAR2A-202ENST00000296446 MYT1Q01538 1121 aa20.56■□□□□ 0.88
PRKAR2A-202ENST00000296446 CUX1P39880 1505 aa20.56■□□□□ 0.88
PRKAR2A-202ENST00000296446 CADPSQ9ULU8 1353 aa20.54■□□□□ 0.88
PRKAR2A-202ENST00000296446 NESP48681 1621 aa20.53■□□□□ 0.88
PRKAR2A-202ENST00000296446 CARMIL1Q5VZK9 1371 aa20.49■□□□□ 0.87
PRKAR2A-202ENST00000296446 KIF21BO75037 1637 aa20.48■□□□□ 0.87
PRKAR2A-202ENST00000296446 TDRD9Q8NDG6 1382 aaKnown RBP20.47■□□□□ 0.87
PRKAR2A-202ENST00000296446 MIER1Q8N108 512 aa20.47■□□□□ 0.87
PRKAR2A-202ENST00000296446 CFTRP13569 1480 aa20.46■□□□□ 0.87
PRKAR2A-202ENST00000296446 RAD54L2Q9Y4B4 1467 aa20.46■□□□□ 0.87
PRKAR2A-202ENST00000296446 TOP2BQ02880 1626 aa20.45■□□□□ 0.86
PRKAR2A-202ENST00000296446 IGF1RP08069 1367 aa20.45■□□□□ 0.86
PRKAR2A-202ENST00000296446 ARAP1Q96P48 1450 aa20.44■□□□□ 0.86
PRKAR2A-202ENST00000296446 HIRIP3Q9BW71 556 aaPredicted RBP20.44■□□□□ 0.86
PRKAR2A-202ENST00000296446 FBLN2P98095 1184 aa20.4■□□□□ 0.86
PRKAR2A-202ENST00000296446 FGD5Q6ZNL6 1462 aa20.4■□□□□ 0.86
PRKAR2A-202ENST00000296446 CC2D2AQ9P2K1 1620 aa20.38■□□□□ 0.85
PRKAR2A-202ENST00000296446 PRXQ9BXM0 1461 aa20.37■□□□□ 0.85
PRKAR2A-202ENST00000296446 FANCD2Q9BXW9 1451 aa20.36■□□□□ 0.85
PRKAR2A-202ENST00000296446 SIN3AQ96ST3 1273 aa20.34■□□□□ 0.85
PRKAR2A-202ENST00000296446 HMGXB3Q12766 1538 aa20.34■□□□□ 0.85
PRKAR2A-202ENST00000296446 CHIC2Q9UKJ5 165 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms