RNA–Protein interactions for RNA: ENST00000449241.5

C3orf18-206, Transcript of chromosome 3 open reading frame 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C3orf18, Length 2,365 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf18-206ENST00000449241 NISCHQ9Y2I1 1504 aa29.6■■■□□ 2.33
C3orf18-206ENST00000449241 CCDC180Q9P1Z9 1646 aa25.91■■□□□ 1.74
C3orf18-206ENST00000449241 ABCC9O60706 1549 aa25.04■■□□□ 1.6
C3orf18-206ENST00000449241 ZCCHC6Q5VYS8 1495 aaKnown RBP24.77■■□□□ 1.56
C3orf18-206ENST00000449241 DCAF8L2P0C7V8 631 aa24.74■■□□□ 1.55
C3orf18-206ENST00000449241 DCAF1Q9Y4B6 1507 aa24.4■■□□□ 1.5
C3orf18-206ENST00000449241 NACADO15069 1562 aa24.28■■□□□ 1.48
C3orf18-206ENST00000449241 MYO15BQ96JP2 1530 aa24.26■■□□□ 1.47
C3orf18-206ENST00000449241 RB1CC1Q8TDY2 1594 aa24.18■■□□□ 1.46
C3orf18-206ENST00000449241 SHROOM4Q9ULL8 1493 aa24■■□□□ 1.43
C3orf18-206ENST00000449241 SCRIBQ14160 1630 aa23.89■■□□□ 1.42
C3orf18-206ENST00000449241 UNC13AQ9UPW8 1703 aa23.66■■□□□ 1.38
C3orf18-206ENST00000449241 PABPN1Q86U42 306 aaKnown RBP eCLIP23.59■■□□□ 1.37
C3orf18-206ENST00000449241 BICRAQ9NZM4 1560 aa23.48■■□□□ 1.35
C3orf18-206ENST00000449241 SUPT5HO00267 1087 aaKnown RBP23.47■■□□□ 1.35
C3orf18-206ENST00000449241 CECR2Q9BXF3 1484 aa23.09■■□□□ 1.29
C3orf18-206ENST00000449241 CHIC1Q5VXU3 224 aa23.03■■□□□ 1.28
C3orf18-206ENST00000449241 MROH2BQ7Z745 1585 aa22.89■■□□□ 1.25
C3orf18-206ENST00000449241 BAZ1AQ9NRL2 1556 aaPredicted RBP22.87■■□□□ 1.25
C3orf18-206ENST00000449241 RSF1Q96T23 1441 aaPredicted RBP22.84■■□□□ 1.25
C3orf18-206ENST00000449241 SMARCA4P51532 1647 aa22.83■■□□□ 1.24
C3orf18-206ENST00000449241 EIF4G1Q04637 1599 aaKnown RBP22.82■■□□□ 1.24
C3orf18-206ENST00000449241 HRCP23327 699 aa22.76■■□□□ 1.23
C3orf18-206ENST00000449241 WIZO95785 1651 aa22.66■■□□□ 1.22
C3orf18-206ENST00000449241 CC2D2AQ9P2K1 1620 aa22.59■■□□□ 1.21
C3orf18-206ENST00000449241 ATAD2BQ9ULI0 1458 aa22.59■■□□□ 1.21
C3orf18-206ENST00000449241 PEG3Q9GZU2 1588 aa22.53■■□□□ 1.2
C3orf18-206ENST00000449241 SMARCA2P51531 1590 aa22.52■■□□□ 1.2
C3orf18-206ENST00000449241 DNAJC5BQ9UF47 199 aa22.52■■□□□ 1.19
C3orf18-206ENST00000449241 PCGF6Q9BYE7 350 aa22.5■■□□□ 1.19
C3orf18-206ENST00000449241 NCAPD3P42695 1498 aa22.44■■□□□ 1.18
C3orf18-206ENST00000449241 BAZ1BQ9UIG0 1483 aaKnown RBP22.44■■□□□ 1.18
C3orf18-206ENST00000449241 TOP2AP11388 1531 aaKnown RBP22.38■■□□□ 1.17
C3orf18-206ENST00000449241 HMGXB3Q12766 1538 aa22.34■■□□□ 1.17
C3orf18-206ENST00000449241 LOC105371045A0A1W2PR82 267 aa22.28■■□□□ 1.16
C3orf18-206ENST00000449241 CCDC88BA6NC98 1476 aa22.19■■□□□ 1.14
C3orf18-206ENST00000449241 PPARGC1BQ86YN6 1023 aaKnown RBP22.16■■□□□ 1.14
C3orf18-206ENST00000449241 TRIM26Q12899 539 aaPredicted RBP22.09■■□□□ 1.13
C3orf18-206ENST00000449241 TRIM41Q8WV44 630 aa21.88■■□□□ 1.09
C3orf18-206ENST00000449241 CADPSQ9ULU8 1353 aa21.87■■□□□ 1.09
C3orf18-206ENST00000449241 NESP48681 1621 aa21.86■■□□□ 1.09
C3orf18-206ENST00000449241 CFTRP13569 1480 aa21.85■■□□□ 1.09
C3orf18-206ENST00000449241 ZEB1P37275 1124 aaPredicted RBP21.74■■□□□ 1.07
C3orf18-206ENST00000449241 LAMC3Q9Y6N6 1575 aa21.72■■□□□ 1.07
C3orf18-206ENST00000449241 FAM9AQ8IZU1 332 aaPredicted RBP21.65■■□□□ 1.06
C3orf18-206ENST00000449241 FANCD2Q9BXW9 1451 aa21.63■■□□□ 1.05
C3orf18-206ENST00000449241 ABCC8Q09428 1581 aa21.62■■□□□ 1.05
C3orf18-206ENST00000449241 PDS5BQ9NTI5 1447 aa21.61■■□□□ 1.05
C3orf18-206ENST00000449241 PRDM2Q13029 1718 aa21.59■■□□□ 1.05
C3orf18-206ENST00000449241 CEP164Q9UPV0 1460 aa21.52■■□□□ 1.04
C3orf18-206ENST00000449241 KIF21AQ7Z4S6 1674 aa21.51■■□□□ 1.03
C3orf18-206ENST00000449241 WRNQ14191 1432 aaPredicted RBP eCLIP21.51■■□□□ 1.03
C3orf18-206ENST00000449241 ERCC6Q03468 1493 aa21.5■■□□□ 1.03
C3orf18-206ENST00000449241 SYNJ1O43426 1573 aa21.42■■□□□ 1.02
C3orf18-206ENST00000449241 CUX1P39880 1505 aa21.42■■□□□ 1.02
C3orf18-206ENST00000449241 EHMT2Q96KQ7 1210 aa21.39■■□□□ 1.02
C3orf18-206ENST00000449241 URB2Q14146 1524 aaKnown RBP21.38■■□□□ 1.01
C3orf18-206ENST00000449241 MRC2Q9UBG0 1479 aa21.35■■□□□ 1.01
C3orf18-206ENST00000449241 TOPBP1Q92547 1522 aa21.33■■□□□ 1.01
C3orf18-206ENST00000449241 TOP2BQ02880 1626 aa21.33■■□□□ 1.01
C3orf18-206ENST00000449241 DNMBPQ6XZF7 1577 aa21.31■■□□□ 1
C3orf18-206ENST00000449241 BIVM-ERCC5R4GMW8 1640 aa21.28■■□□□ 1
C3orf18-206ENST00000449241 THOC2Q8NI27 1593 aaKnown RBP21.26■□□□□ 0.99
C3orf18-206ENST00000449241 FGD5Q6ZNL6 1462 aa21.25■□□□□ 0.99
C3orf18-206ENST00000449241 WDR62O43379 1518 aa21.23■□□□□ 0.99
C3orf18-206ENST00000449241 POLA1P09884 1462 aaPredicted RBP21.22■□□□□ 0.99
C3orf18-206ENST00000449241 RAD54L2Q9Y4B4 1467 aa21.17■□□□□ 0.98
C3orf18-206ENST00000449241 SOGA1O94964 1423 aa21.15■□□□□ 0.98
C3orf18-206ENST00000449241 CUX2O14529 1486 aa21.12■□□□□ 0.97
C3orf18-206ENST00000449241 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.09■□□□□ 0.97
C3orf18-206ENST00000449241 SCAF1Q9H7N4 1312 aaKnown RBP21.09■□□□□ 0.97
C3orf18-206ENST00000449241 RUSC2Q8N2Y8 1516 aa21.09■□□□□ 0.97
C3orf18-206ENST00000449241 CCER1Q8TC90 406 aaPredicted RBP21.05■□□□□ 0.96
C3orf18-206ENST00000449241 CEP162Q5TB80 1403 aa21.04■□□□□ 0.96
C3orf18-206ENST00000449241 TDRD9Q8NDG6 1382 aaKnown RBP21.03■□□□□ 0.96
C3orf18-206ENST00000449241 ABCA10Q8WWZ4 1543 aa21.02■□□□□ 0.96
C3orf18-206ENST00000449241 TARBP1Q13395 1621 aaKnown RBP21.02■□□□□ 0.96
C3orf18-206ENST00000449241 TNIKQ9UKE5 1360 aa21.02■□□□□ 0.96
C3orf18-206ENST00000449241 IFT140Q96RY7 1462 aa21.01■□□□□ 0.95
C3orf18-206ENST00000449241 PELP1Q8IZL8 1130 aaKnown RBP21.01■□□□□ 0.95
C3orf18-206ENST00000449241 EEA1Q15075 1411 aa21.01■□□□□ 0.95
C3orf18-206ENST00000449241 KIF27Q86VH2 1401 aa20.99■□□□□ 0.95
C3orf18-206ENST00000449241 ZNF608Q9ULD9 1512 aaPredicted RBP20.98■□□□□ 0.95
C3orf18-206ENST00000449241 AQRO60306 1485 aaKnown RBP eCLIP20.95■□□□□ 0.94
C3orf18-206ENST00000449241 WDR97A6NE52 1622 aa20.94■□□□□ 0.94
C3orf18-206ENST00000449241 CSRNP3Q8WYN3 585 aa20.92■□□□□ 0.94
C3orf18-206ENST00000449241 GAPVD1Q14C86 1478 aa20.9■□□□□ 0.94
C3orf18-206ENST00000449241 IGF1RP08069 1367 aa20.87■□□□□ 0.93
C3orf18-206ENST00000449241 ABCA5Q8WWZ7 1642 aa20.87■□□□□ 0.93
C3orf18-206ENST00000449241 GOLGA3Q08378 1498 aa20.85■□□□□ 0.93
C3orf18-206ENST00000449241 EIF4G3O43432 1585 aaKnown RBP20.84■□□□□ 0.93
C3orf18-206ENST00000449241 ACIN1Q9UKV3 1341 aaKnown RBP20.83■□□□□ 0.93
C3orf18-206ENST00000449241 DIEXFQ68CQ4 756 aaKnown RBP20.81■□□□□ 0.92
C3orf18-206ENST00000449241 TTBK1Q5TCY1 1321 aaPredicted RBP20.79■□□□□ 0.92
C3orf18-206ENST00000449241 UBTFP17480 764 aaKnown RBP20.79■□□□□ 0.92
C3orf18-206ENST00000449241 GRIN2BQ13224 1484 aa20.78■□□□□ 0.92
C3orf18-206ENST00000449241 ERICH3Q5RHP9 1530 aa20.76■□□□□ 0.91
C3orf18-206ENST00000449241 NEUROD1Q13562 356 aa20.75■□□□□ 0.91
C3orf18-206ENST00000449241 CARMIL1Q5VZK9 1371 aa20.75■□□□□ 0.91
C3orf18-206ENST00000449241 PBRM1Q86U86 1689 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms