RNA–Protein interactions for RNA: ENST00000328354.10

CHEK2-201, Transcript of checkpoint kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHEK2, Length 1,867 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK2-201ENST00000328354 NISCHQ9Y2I1 1504 aa31.96■■■□□ 2.71
CHEK2-201ENST00000328354 CCDC180Q9P1Z9 1646 aa27.82■■■□□ 2.04
CHEK2-201ENST00000328354 ZCCHC6Q5VYS8 1495 aaKnown RBP26.9■■□□□ 1.9
CHEK2-201ENST00000328354 DCAF1Q9Y4B6 1507 aa26.48■■□□□ 1.83
CHEK2-201ENST00000328354 ABCC9O60706 1549 aa26.46■■□□□ 1.83
CHEK2-201ENST00000328354 DCAF8L2P0C7V8 631 aa26.17■■□□□ 1.78
CHEK2-201ENST00000328354 SHROOM4Q9ULL8 1493 aa26.1■■□□□ 1.77
CHEK2-201ENST00000328354 MYO15BQ96JP2 1530 aa26.1■■□□□ 1.77
CHEK2-201ENST00000328354 NACADO15069 1562 aa25.83■■□□□ 1.73
CHEK2-201ENST00000328354 RB1CC1Q8TDY2 1594 aa25.55■■□□□ 1.68
CHEK2-201ENST00000328354 SCRIBQ14160 1630 aa25.54■■□□□ 1.68
CHEK2-201ENST00000328354 SUPT5HO00267 1087 aaKnown RBP25.21■■□□□ 1.63
CHEK2-201ENST00000328354 UNC13AQ9UPW8 1703 aa25.11■■□□□ 1.61
CHEK2-201ENST00000328354 RSF1Q96T23 1441 aaPredicted RBP24.85■■□□□ 1.57
CHEK2-201ENST00000328354 BICRAQ9NZM4 1560 aa24.8■■□□□ 1.56
CHEK2-201ENST00000328354 CECR2Q9BXF3 1484 aa24.79■■□□□ 1.56
CHEK2-201ENST00000328354 PABPN1Q86U42 306 aaKnown RBP eCLIP24.77■■□□□ 1.56
CHEK2-201ENST00000328354 MROH2BQ7Z745 1585 aa24.69■■□□□ 1.54
CHEK2-201ENST00000328354 BAZ1AQ9NRL2 1556 aaPredicted RBP24.66■■□□□ 1.54
CHEK2-201ENST00000328354 SMARCA4P51532 1647 aa24.53■■□□□ 1.52
CHEK2-201ENST00000328354 WIZO95785 1651 aa24.5■■□□□ 1.51
CHEK2-201ENST00000328354 DNAJC5BQ9UF47 199 aa24.3■■□□□ 1.48
CHEK2-201ENST00000328354 CHIC1Q5VXU3 224 aa24.3■■□□□ 1.48
CHEK2-201ENST00000328354 TOP2AP11388 1531 aaKnown RBP24.27■■□□□ 1.48
CHEK2-201ENST00000328354 PEG3Q9GZU2 1588 aa24.27■■□□□ 1.47
CHEK2-201ENST00000328354 SMARCA2P51531 1590 aa24.07■■□□□ 1.44
CHEK2-201ENST00000328354 ATAD2BQ9ULI0 1458 aa24.06■■□□□ 1.44
CHEK2-201ENST00000328354 EIF4G1Q04637 1599 aaKnown RBP24.01■■□□□ 1.43
CHEK2-201ENST00000328354 CCDC88BA6NC98 1476 aa23.99■■□□□ 1.43
CHEK2-201ENST00000328354 CC2D2AQ9P2K1 1620 aa23.92■■□□□ 1.42
CHEK2-201ENST00000328354 BAZ1BQ9UIG0 1483 aaKnown RBP23.92■■□□□ 1.42
CHEK2-201ENST00000328354 HMGXB3Q12766 1538 aa23.84■■□□□ 1.41
CHEK2-201ENST00000328354 NCAPD3P42695 1498 aa23.84■■□□□ 1.41
CHEK2-201ENST00000328354 TRIM41Q8WV44 630 aa23.7■■□□□ 1.39
CHEK2-201ENST00000328354 ABCC8Q09428 1581 aa23.54■■□□□ 1.36
CHEK2-201ENST00000328354 WRNQ14191 1432 aaPredicted RBP eCLIP23.38■■□□□ 1.33
CHEK2-201ENST00000328354 CFTRP13569 1480 aa23.36■■□□□ 1.33
CHEK2-201ENST00000328354 LOC105371045A0A1W2PR82 267 aa23.33■■□□□ 1.33
CHEK2-201ENST00000328354 PRDM2Q13029 1718 aa23.33■■□□□ 1.32
CHEK2-201ENST00000328354 SYNJ1O43426 1573 aa23.29■■□□□ 1.32
CHEK2-201ENST00000328354 FAM9AQ8IZU1 332 aaPredicted RBP23.23■■□□□ 1.31
CHEK2-201ENST00000328354 CADPSQ9ULU8 1353 aa23.21■■□□□ 1.31
CHEK2-201ENST00000328354 TOP2BQ02880 1626 aa23.2■■□□□ 1.31
CHEK2-201ENST00000328354 BIVM-ERCC5R4GMW8 1640 aa23.2■■□□□ 1.3
CHEK2-201ENST00000328354 EEA1Q15075 1411 aa23.17■■□□□ 1.3
CHEK2-201ENST00000328354 SOGA1O94964 1423 aa23.13■■□□□ 1.29
CHEK2-201ENST00000328354 CUX1P39880 1505 aa23.08■■□□□ 1.28
CHEK2-201ENST00000328354 RUSC2Q8N2Y8 1516 aa23.04■■□□□ 1.28
CHEK2-201ENST00000328354 LAMC3Q9Y6N6 1575 aa23■■□□□ 1.27
CHEK2-201ENST00000328354 CSRNP3Q8WYN3 585 aa22.98■■□□□ 1.27
CHEK2-201ENST00000328354 FANCD2Q9BXW9 1451 aa22.95■■□□□ 1.27
CHEK2-201ENST00000328354 NESP48681 1621 aa22.93■■□□□ 1.26
CHEK2-201ENST00000328354 KIF21BO75037 1637 aa22.88■■□□□ 1.25
CHEK2-201ENST00000328354 EHMT2Q96KQ7 1210 aa22.85■■□□□ 1.25
CHEK2-201ENST00000328354 GOLGA3Q08378 1498 aa22.84■■□□□ 1.25
CHEK2-201ENST00000328354 CEP164Q9UPV0 1460 aa22.83■■□□□ 1.25
CHEK2-201ENST00000328354 TNIKQ9UKE5 1360 aa22.82■■□□□ 1.24
CHEK2-201ENST00000328354 DNMBPQ6XZF7 1577 aa22.82■■□□□ 1.24
CHEK2-201ENST00000328354 PDS5BQ9NTI5 1447 aa22.77■■□□□ 1.24
CHEK2-201ENST00000328354 FGD5Q6ZNL6 1462 aa22.77■■□□□ 1.24
CHEK2-201ENST00000328354 KIF27Q86VH2 1401 aa22.76■■□□□ 1.23
CHEK2-201ENST00000328354 ERCC6Q03468 1493 aa22.76■■□□□ 1.23
CHEK2-201ENST00000328354 TOPBP1Q92547 1522 aa22.75■■□□□ 1.23
CHEK2-201ENST00000328354 KIF21AQ7Z4S6 1674 aa22.7■■□□□ 1.22
CHEK2-201ENST00000328354 ERICH3Q5RHP9 1530 aa22.7■■□□□ 1.22
CHEK2-201ENST00000328354 PRXQ9BXM0 1461 aa22.69■■□□□ 1.22
CHEK2-201ENST00000328354 CEP162Q5TB80 1403 aa22.69■■□□□ 1.22
CHEK2-201ENST00000328354 URB2Q14146 1524 aaKnown RBP22.67■■□□□ 1.22
CHEK2-201ENST00000328354 RAPGEF2Q9Y4G8 1499 aa22.67■■□□□ 1.22
CHEK2-201ENST00000328354 UBTFP17480 764 aaKnown RBP22.65■■□□□ 1.22
CHEK2-201ENST00000328354 CUX2O14529 1486 aa22.65■■□□□ 1.22
CHEK2-201ENST00000328354 POLA1P09884 1462 aaPredicted RBP22.65■■□□□ 1.22
CHEK2-201ENST00000328354 ABCA10Q8WWZ4 1543 aa22.61■■□□□ 1.21
CHEK2-201ENST00000328354 WDR97A6NE52 1622 aa22.56■■□□□ 1.2
CHEK2-201ENST00000328354 IGF1RP08069 1367 aa22.55■■□□□ 1.2
CHEK2-201ENST00000328354 RAD54L2Q9Y4B4 1467 aa22.55■■□□□ 1.2
CHEK2-201ENST00000328354 THOC2Q8NI27 1593 aaKnown RBP22.53■■□□□ 1.2
CHEK2-201ENST00000328354 MRC2Q9UBG0 1479 aa22.48■■□□□ 1.19
CHEK2-201ENST00000328354 CLIP1P30622 1438 aa22.46■■□□□ 1.19
CHEK2-201ENST00000328354 TRIM26Q12899 539 aaPredicted RBP22.45■■□□□ 1.19
CHEK2-201ENST00000328354 PCGF6Q9BYE7 350 aa22.45■■□□□ 1.19
CHEK2-201ENST00000328354 ABCA5Q8WWZ7 1642 aa22.42■■□□□ 1.18
CHEK2-201ENST00000328354 CARMIL1Q5VZK9 1371 aa22.42■■□□□ 1.18
CHEK2-201ENST00000328354 TARBP1Q13395 1621 aaKnown RBP22.41■■□□□ 1.18
CHEK2-201ENST00000328354 CUL7Q14999 1698 aa22.4■■□□□ 1.18
CHEK2-201ENST00000328354 WDR62O43379 1518 aa22.38■■□□□ 1.17
CHEK2-201ENST00000328354 GAPVD1Q14C86 1478 aa22.32■■□□□ 1.16
CHEK2-201ENST00000328354 VPS8Q8N3P4 1428 aa22.32■■□□□ 1.16
CHEK2-201ENST00000328354 TDRD9Q8NDG6 1382 aaKnown RBP22.29■■□□□ 1.16
CHEK2-201ENST00000328354 ARAP1Q96P48 1450 aa22.25■■□□□ 1.15
CHEK2-201ENST00000328354 IFT140Q96RY7 1462 aa22.25■■□□□ 1.15
CHEK2-201ENST00000328354 PBRM1Q86U86 1689 aa22.23■■□□□ 1.15
CHEK2-201ENST00000328354 ARHGAP35Q9NRY4 1499 aa22.21■■□□□ 1.15
CHEK2-201ENST00000328354 CTTNBP2Q8WZ74 1663 aa22.19■■□□□ 1.14
CHEK2-201ENST00000328354 PPARGC1BQ86YN6 1023 aaKnown RBP22.17■■□□□ 1.14
CHEK2-201ENST00000328354 RANGAP1P46060 587 aaPredicted RBP22.16■■□□□ 1.14
CHEK2-201ENST00000328354 AQRO60306 1485 aaKnown RBP eCLIP22.12■■□□□ 1.131e-11■■■■■ 27.3
CHEK2-201ENST00000328354 GRIN2BQ13224 1484 aa22.12■■□□□ 1.13
CHEK2-201ENST00000328354 ADAMTS12P58397 1594 aa22.1■■□□□ 1.13
CHEK2-201ENST00000328354 ZNF608Q9ULD9 1512 aaPredicted RBP22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms