Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC13.24□□□□□ -0.29
GABREP78334 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
GABREP78334 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
GABREP78334 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
GABREP78334 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
GABREP78334 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
GABREP78334 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC13.24□□□□□ -0.29
GABREP78334 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
GABREP78334 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
GABREP78334 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
GABREP78334 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
GABREP78334 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
GABREP78334 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC13.24□□□□□ -0.29
GABREP78334 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
GABREP78334 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC13.24□□□□□ -0.29
GABREP78334 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
GABREP78334 CTBP1-AS2-206ENST00000581398 5652 ntBASIC13.24□□□□□ -0.29
GABREP78334 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC13.24□□□□□ -0.29
GABREP78334 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
GABREP78334 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
GABREP78334 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
GABREP78334 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC13.23□□□□□ -0.29
GABREP78334 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC13.23□□□□□ -0.29
GABREP78334 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC13.23□□□□□ -0.29
GABREP78334 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC13.23□□□□□ -0.29
GABREP78334 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
GABREP78334 PGD-201ENST00000270776 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
GABREP78334 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC13.23□□□□□ -0.29
GABREP78334 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
GABREP78334 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
GABREP78334 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC13.23□□□□□ -0.29
GABREP78334 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
GABREP78334 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
GABREP78334 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
GABREP78334 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC13.23□□□□□ -0.29
GABREP78334 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
GABREP78334 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC13.23□□□□□ -0.29
GABREP78334 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
GABREP78334 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
GABREP78334 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC13.23□□□□□ -0.29
GABREP78334 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
GABREP78334 SIRPB3P-201ENST00000340424 1216 ntBASIC13.23□□□□□ -0.29
GABREP78334 TNNT2-207ENST00000367322 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
GABREP78334 RHOC-205ENST00000369636 786 ntTSL 2 BASIC13.23□□□□□ -0.29
GABREP78334 RHOC-207ENST00000369638 1028 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
GABREP78334 HMGCLL1-203ENST00000370850 1171 ntTSL 2 BASIC13.23□□□□□ -0.29
GABREP78334 IFNLR1-203ENST00000374418 674 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
GABREP78334 PGAM1P11-201ENST00000416729 680 ntBASIC13.23□□□□□ -0.29
GABREP78334 EFNA4-203ENST00000427683 1052 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
GABREP78334 CDCA4P4-201ENST00000435216 680 ntBASIC13.23□□□□□ -0.29
GABREP78334 HDAC2-AS2-203ENST00000436876 591 ntTSL 5 BASIC13.23□□□□□ -0.29
GABREP78334 BRI3P1-201ENST00000440440 378 ntBASIC13.23□□□□□ -0.29
GABREP78334 AL121787.1-202ENST00000445838 876 ntTSL 5 BASIC13.23□□□□□ -0.29
GABREP78334 AC138409.2-203ENST00000508395 553 ntTSL 4 BASIC13.23□□□□□ -0.29
GABREP78334 OVOL3-201ENST00000585332 695 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
GABREP78334 AC008735.2-201ENST00000589456 549 ntTSL 5 BASIC13.23□□□□□ -0.29
GABREP78334 AC011462.4-201ENST00000616866 449 ntBASIC13.23□□□□□ -0.29
GABREP78334 Metazoa_SRP.200-201ENST00000622073 282 ntBASIC13.23□□□□□ -0.29
GABREP78334 OVOL3-202ENST00000633214 675 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
GABREP78334 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
GABREP78334 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC13.23□□□□□ -0.29
GABREP78334 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
GABREP78334 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
GABREP78334 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
GABREP78334 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
GABREP78334 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
GABREP78334 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
GABREP78334 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
GABREP78334 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
GABREP78334 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
GABREP78334 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
GABREP78334 BX640514.1-201ENST00000583223 1918 ntBASIC13.23□□□□□ -0.29
GABREP78334 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
GABREP78334 SARS-202ENST00000369923 1882 ntTSL 5 BASIC13.23□□□□□ -0.29
GABREP78334 TNN-203ENST00000622870 3719 ntTSL 5 BASIC13.23□□□□□ -0.29
GABREP78334 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
GABREP78334 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
GABREP78334 SNAPC2-206ENST00000597584 1413 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
GABREP78334 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
GABREP78334 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
GABREP78334 TMUB2-201ENST00000319511 2418 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
GABREP78334 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC13.22□□□□□ -0.29
GABREP78334 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC13.22□□□□□ -0.29
GABREP78334 HTR3E-205ENST00000436361 1371 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
GABREP78334 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
GABREP78334 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
GABREP78334 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC13.22□□□□□ -0.29
GABREP78334 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
GABREP78334 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC13.22□□□□□ -0.29
GABREP78334 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
GABREP78334 GNAL-203ENST00000423027 2255 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
GABREP78334 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC13.22□□□□□ -0.29
GABREP78334 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC13.22□□□□□ -0.29
GABREP78334 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
GABREP78334 CAMP-201ENST00000296435 745 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
GABREP78334 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
GABREP78334 GAPDH-204ENST00000396859 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
GABREP78334 LINC01983-201ENST00000413586 574 ntTSL 2 BASIC13.22□□□□□ -0.29
GABREP78334 AP001628.2-201ENST00000420273 784 ntTSL 2 BASIC13.22□□□□□ -0.29
GABREP78334 KRT8P30-201ENST00000432100 650 ntBASIC13.22□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms