RNA–Protein interactions for RNA: ENST00000370850.6

HMGCLL1-203, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2 BASIC

Gene HMGCLL1, Length 1,171 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-203ENST00000370850 NISCHQ9Y2I1 1504 aa33.05■■■□□ 2.88
HMGCLL1-203ENST00000370850 AEBP2Q6ZN18 517 aaPredicted RBP29.77■■■□□ 2.36
HMGCLL1-203ENST00000370850 CCDC180Q9P1Z9 1646 aa29.43■■■□□ 2.3
HMGCLL1-203ENST00000370850 ABCC9O60706 1549 aa28.54■■■□□ 2.16
HMGCLL1-203ENST00000370850 CHIC1Q5VXU3 224 aa27.87■■■□□ 2.05
HMGCLL1-203ENST00000370850 NACADO15069 1562 aa27.6■■■□□ 2.01
HMGCLL1-203ENST00000370850 RB1CC1Q8TDY2 1594 aa27.6■■■□□ 2.01
HMGCLL1-203ENST00000370850 ZCCHC6Q5VYS8 1495 aaKnown RBP27.58■■■□□ 2.01
HMGCLL1-203ENST00000370850 MYO15BQ96JP2 1530 aa27.53■■■□□ 2
HMGCLL1-203ENST00000370850 DCAF1Q9Y4B6 1507 aa27.43■■□□□ 1.98
HMGCLL1-203ENST00000370850 DCAF8L2P0C7V8 631 aa27.35■■□□□ 1.97
HMGCLL1-203ENST00000370850 UNC13AQ9UPW8 1703 aa26.97■■□□□ 1.91
HMGCLL1-203ENST00000370850 BICRAQ9NZM4 1560 aa26.75■■□□□ 1.87
HMGCLL1-203ENST00000370850 SCRIBQ14160 1630 aa26.75■■□□□ 1.87
HMGCLL1-203ENST00000370850 PABPN1Q86U42 306 aaKnown RBP eCLIP26.61■■□□□ 1.85
HMGCLL1-203ENST00000370850 SHROOM4Q9ULL8 1493 aa26.59■■□□□ 1.85
HMGCLL1-203ENST00000370850 DNAJC5BQ9UF47 199 aa26.06■■□□□ 1.76
HMGCLL1-203ENST00000370850 EIF4G1Q04637 1599 aaKnown RBP26.03■■□□□ 1.76
HMGCLL1-203ENST00000370850 CC2D2AQ9P2K1 1620 aa25.89■■□□□ 1.74
HMGCLL1-203ENST00000370850 CECR2Q9BXF3 1484 aa25.67■■□□□ 1.7
HMGCLL1-203ENST00000370850 SMARCA4P51532 1647 aa25.64■■□□□ 1.7
HMGCLL1-203ENST00000370850 BAZ1AQ9NRL2 1556 aaPredicted RBP25.63■■□□□ 1.69
HMGCLL1-203ENST00000370850 SENP3Q9H4L4 574 aaPredicted RBP25.53■■□□□ 1.68
HMGCLL1-203ENST00000370850 SMARCA2P51531 1590 aa25.46■■□□□ 1.67
HMGCLL1-203ENST00000370850 NCAPD3P42695 1498 aa25.45■■□□□ 1.66
HMGCLL1-203ENST00000370850 ATAD2BQ9ULI0 1458 aa25.45■■□□□ 1.66
HMGCLL1-203ENST00000370850 PEG3Q9GZU2 1588 aa25.44■■□□□ 1.66
HMGCLL1-203ENST00000370850 MROH2BQ7Z745 1585 aa25.44■■□□□ 1.66
HMGCLL1-203ENST00000370850 HMGXB3Q12766 1538 aa25.37■■□□□ 1.65
HMGCLL1-203ENST00000370850 BAZ1BQ9UIG0 1483 aaKnown RBP25.24■■□□□ 1.63
HMGCLL1-203ENST00000370850 RSF1Q96T23 1441 aaPredicted RBP25.18■■□□□ 1.62
HMGCLL1-203ENST00000370850 WIZO95785 1651 aa25.17■■□□□ 1.62
HMGCLL1-203ENST00000370850 PHF23Q9BUL5 403 aaPredicted RBP25.1■■□□□ 1.61
HMGCLL1-203ENST00000370850 TOP2AP11388 1531 aaKnown RBP24.96■■□□□ 1.59
HMGCLL1-203ENST00000370850 LAMC3Q9Y6N6 1575 aa24.79■■□□□ 1.56
HMGCLL1-203ENST00000370850 NESP48681 1621 aa24.74■■□□□ 1.55
HMGCLL1-203ENST00000370850 CADPSQ9ULU8 1353 aa24.67■■□□□ 1.54
HMGCLL1-203ENST00000370850 ERCC6Q03468 1493 aa24.62■■□□□ 1.53
HMGCLL1-203ENST00000370850 CCDC88BA6NC98 1476 aa24.6■■□□□ 1.53
HMGCLL1-203ENST00000370850 CFTRP13569 1480 aa24.58■■□□□ 1.52
HMGCLL1-203ENST00000370850 PDS5BQ9NTI5 1447 aa24.57■■□□□ 1.52
HMGCLL1-203ENST00000370850 KIF21AQ7Z4S6 1674 aa24.5■■□□□ 1.51
HMGCLL1-203ENST00000370850 PRDM2Q13029 1718 aa24.47■■□□□ 1.51
HMGCLL1-203ENST00000370850 SUPT5HO00267 1087 aaKnown RBP24.45■■□□□ 1.5
HMGCLL1-203ENST00000370850 THOC2Q8NI27 1593 aaKnown RBP24.45■■□□□ 1.5
HMGCLL1-203ENST00000370850 CUX2O14529 1486 aa24.41■■□□□ 1.5
HMGCLL1-203ENST00000370850 FANCD2Q9BXW9 1451 aa24.39■■□□□ 1.5
HMGCLL1-203ENST00000370850 CEP164Q9UPV0 1460 aa24.37■■□□□ 1.49
HMGCLL1-203ENST00000370850 MRC2Q9UBG0 1479 aa24.32■■□□□ 1.48
HMGCLL1-203ENST00000370850 WDR62O43379 1518 aa24.28■■□□□ 1.48
HMGCLL1-203ENST00000370850 URB2Q14146 1524 aaKnown RBP24.15■■□□□ 1.46
HMGCLL1-203ENST00000370850 ABCC8Q09428 1581 aa24.07■■□□□ 1.44
HMGCLL1-203ENST00000370850 DNMBPQ6XZF7 1577 aa24.03■■□□□ 1.44
HMGCLL1-203ENST00000370850 TOPBP1Q92547 1522 aa24.02■■□□□ 1.44
HMGCLL1-203ENST00000370850 CUX1P39880 1505 aa23.87■■□□□ 1.41
HMGCLL1-203ENST00000370850 IFT140Q96RY7 1462 aa23.87■■□□□ 1.41
HMGCLL1-203ENST00000370850 FOXD1Q16676 465 aa23.84■■□□□ 1.41
HMGCLL1-203ENST00000370850 POLA1P09884 1462 aaPredicted RBP23.82■■□□□ 1.4
HMGCLL1-203ENST00000370850 TARBP1Q13395 1621 aaKnown RBP23.79■■□□□ 1.4
HMGCLL1-203ENST00000370850 FGD5Q6ZNL6 1462 aa23.77■■□□□ 1.4
HMGCLL1-203ENST00000370850 BIVM-ERCC5R4GMW8 1640 aa23.75■■□□□ 1.39
HMGCLL1-203ENST00000370850 WRNQ14191 1432 aaPredicted RBP eCLIP23.74■■□□□ 1.39
HMGCLL1-203ENST00000370850 TOP2BQ02880 1626 aa23.73■■□□□ 1.39
HMGCLL1-203ENST00000370850 ZNF608Q9ULD9 1512 aaPredicted RBP23.7■■□□□ 1.38
HMGCLL1-203ENST00000370850 SYNJ1O43426 1573 aa23.69■■□□□ 1.38
HMGCLL1-203ENST00000370850 WDR97A6NE52 1622 aa23.69■■□□□ 1.38
HMGCLL1-203ENST00000370850 SOGA1O94964 1423 aa23.68■■□□□ 1.38
HMGCLL1-203ENST00000370850 EIF4G3O43432 1585 aaKnown RBP23.68■■□□□ 1.38
HMGCLL1-203ENST00000370850 RAD54L2Q9Y4B4 1467 aa23.67■■□□□ 1.38
HMGCLL1-203ENST00000370850 ABCA10Q8WWZ4 1543 aa23.58■■□□□ 1.36
HMGCLL1-203ENST00000370850 AQRO60306 1485 aaKnown RBP eCLIP23.56■■□□□ 1.36
HMGCLL1-203ENST00000370850 ABCA5Q8WWZ7 1642 aa23.51■■□□□ 1.35
HMGCLL1-203ENST00000370850 TDRD9Q8NDG6 1382 aaKnown RBP23.51■■□□□ 1.35
HMGCLL1-203ENST00000370850 DNAJC5Q9H3Z4 198 aa23.46■■□□□ 1.35
HMGCLL1-203ENST00000370850 GRIN2BQ13224 1484 aa23.44■■□□□ 1.34
HMGCLL1-203ENST00000370850 GAPVD1Q14C86 1478 aa23.44■■□□□ 1.34
HMGCLL1-203ENST00000370850 PBRM1Q86U86 1689 aa23.44■■□□□ 1.34
HMGCLL1-203ENST00000370850 MAGI1Q96QZ7 1491 aaPredicted RBP23.4■■□□□ 1.34
HMGCLL1-203ENST00000370850 SNAPC4Q5SXM2 1469 aa23.39■■□□□ 1.34
HMGCLL1-203ENST00000370850 CHD1O14646 1710 aa23.34■■□□□ 1.33
HMGCLL1-203ENST00000370850 ERICH3Q5RHP9 1530 aa23.32■■□□□ 1.32
HMGCLL1-203ENST00000370850 OSCARQ8IYS5 282 aa23.3■■□□□ 1.32
HMGCLL1-203ENST00000370850 SYNJ2O15056 1496 aa23.3■■□□□ 1.32
HMGCLL1-203ENST00000370850 ADAMTS12P58397 1594 aa23.27■■□□□ 1.32
HMGCLL1-203ENST00000370850 KIF27Q86VH2 1401 aa23.24■■□□□ 1.31
HMGCLL1-203ENST00000370850 FHAD1B1AJZ9 1412 aa23.19■■□□□ 1.3
HMGCLL1-203ENST00000370850 CHMP7Q8WUX9 453 aaPredicted RBP23.18■■□□□ 1.3
HMGCLL1-203ENST00000370850 FBLN2P98095 1184 aa23.17■■□□□ 1.3
HMGCLL1-203ENST00000370850 GRIN2AQ12879 1464 aa23.15■■□□□ 1.3
HMGCLL1-203ENST00000370850 CUL7Q14999 1698 aa23.14■■□□□ 1.29
HMGCLL1-203ENST00000370850 TRIM41Q8WV44 630 aa23.14■■□□□ 1.29
HMGCLL1-203ENST00000370850 CLASP1Q7Z460 1538 aa23.13■■□□□ 1.29
HMGCLL1-203ENST00000370850 IGF1RP08069 1367 aa23.11■■□□□ 1.29
HMGCLL1-203ENST00000370850 NUP160Q12769 1436 aa23.06■■□□□ 1.28
HMGCLL1-203ENST00000370850 CEP170Q5SW79 1584 aa23.03■■□□□ 1.28
HMGCLL1-203ENST00000370850 ARHGEF11O15085 1522 aa22.99■■□□□ 1.27
HMGCLL1-203ENST00000370850 RUSC2Q8N2Y8 1516 aa22.99■■□□□ 1.27
HMGCLL1-203ENST00000370850 RIMBP3CA6NJZ7 1639 aa22.99■■□□□ 1.27
HMGCLL1-203ENST00000370850 RIMBP3BA6NNM3 1639 aa22.99■■□□□ 1.27
HMGCLL1-203ENST00000370850 RIMBP3Q9UFD9 1639 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms