RNA–Protein interactions for RNA: ENST00000394850.6

TTC7A-202, Transcript of tetratricopeptide repeat domain 7A, humanhuman

TSL 1 (best) BASIC

Gene TTC7A, Length 4,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC7A-202ENST00000394850 NISCHQ9Y2I1 1504 aa24.89■■□□□ 1.58
TTC7A-202ENST00000394850 DCAF8L2P0C7V8 631 aa24.87■■□□□ 1.57
TTC7A-202ENST00000394850 SUPT5HO00267 1087 aaKnown RBP24.61■■□□□ 1.53
TTC7A-202ENST00000394850 SHROOM4Q9ULL8 1493 aa24.25■■□□□ 1.47
TTC7A-202ENST00000394850 EHMT2Q96KQ7 1210 aa23.67■■□□□ 1.38
TTC7A-202ENST00000394850 PCGF6Q9BYE7 350 aa23.64■■□□□ 1.37
TTC7A-202ENST00000394850 FAM9AQ8IZU1 332 aaPredicted RBP23.14■■□□□ 1.3
TTC7A-202ENST00000394850 TTBK1Q5TCY1 1321 aaPredicted RBP22.92■■□□□ 1.26
TTC7A-202ENST00000394850 HRCP23327 699 aa22.85■■□□□ 1.25
TTC7A-202ENST00000394850 PPARGC1BQ86YN6 1023 aaKnown RBP22.72■■□□□ 1.23
TTC7A-202ENST00000394850 ZEB1P37275 1124 aaPredicted RBP22.59■■□□□ 1.21
TTC7A-202ENST00000394850 CCER1Q8TC90 406 aaPredicted RBP22.57■■□□□ 1.2
TTC7A-202ENST00000394850 TRIM41Q8WV44 630 aa22.56■■□□□ 1.2
TTC7A-202ENST00000394850 LOC105371045A0A1W2PR82 267 aa22.56■■□□□ 1.2
TTC7A-202ENST00000394850 PELP1Q8IZL8 1130 aaKnown RBP22.52■■□□□ 1.2
TTC7A-202ENST00000394850 CHIC1Q5VXU3 224 aa22.5■■□□□ 1.19
TTC7A-202ENST00000394850 CENPBP07199 599 aaPredicted RBP22.5■■□□□ 1.19
TTC7A-202ENST00000394850 TRIM26Q12899 539 aaPredicted RBP22.41■■□□□ 1.18
TTC7A-202ENST00000394850 APLP2Q06481 763 aa22.37■■□□□ 1.17
TTC7A-202ENST00000394850 YTHDC1Q96MU7 727 aaKnown RBP22.35■■□□□ 1.17
TTC7A-202ENST00000394850 RANGAP1P46060 587 aaPredicted RBP22.27■■□□□ 1.16
TTC7A-202ENST00000394850 UBTFP17480 764 aaKnown RBP22.05■■□□□ 1.12
TTC7A-202ENST00000394850 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.92■■□□□ 1.1
TTC7A-202ENST00000394850 MYT1Q01538 1121 aa21.83■■□□□ 1.09
TTC7A-202ENST00000394850 DIEXFQ68CQ4 756 aaKnown RBP21.73■■□□□ 1.07
TTC7A-202ENST00000394850 ERICH6Q7L0X2 663 aa21.71■■□□□ 1.07
TTC7A-202ENST00000394850 HNRNPUL2Q1KMD3 747 aaKnown RBP21.69■■□□□ 1.06
TTC7A-202ENST00000394850 ATP1B4Q9UN42 357 aaPredicted RBP21.65■■□□□ 1.06
TTC7A-202ENST00000394850 GTF3C3Q9Y5Q9 886 aa21.64■■□□□ 1.05
TTC7A-202ENST00000394850 NEFLP07196 543 aa21.58■■□□□ 1.04
TTC7A-202ENST00000394850 ABCC9O60706 1549 aa21.53■■□□□ 1.04
TTC7A-202ENST00000394850 ITGAEP38570 1179 aa21.51■■□□□ 1.03
TTC7A-202ENST00000394850 ACIN1Q9UKV3 1341 aaKnown RBP21.38■■□□□ 1.01
TTC7A-202ENST00000394850 SCAF1Q9H7N4 1312 aaKnown RBP21.26■□□□□ 0.99
TTC7A-202ENST00000394850 MYO15BQ96JP2 1530 aa21.22■□□□□ 0.99
TTC7A-202ENST00000394850 BCANQ96GW7 911 aa21.19■□□□□ 0.98
TTC7A-202ENST00000394850 NEUROD1Q13562 356 aa21.18■□□□□ 0.98
TTC7A-202ENST00000394850 ZNF316A6NFI3 1004 aaPredicted RBP21.15■□□□□ 0.98
TTC7A-202ENST00000394850 CNGB1Q14028 1251 aaPredicted RBP21.13■□□□□ 0.97
TTC7A-202ENST00000394850 DCAF1Q9Y4B6 1507 aa21.09■□□□□ 0.97
TTC7A-202ENST00000394850 POLR3GLQ9BT43 218 aa20.99■□□□□ 0.95
TTC7A-202ENST00000394850 CCDC180Q9P1Z9 1646 aa20.94■□□□□ 0.94
TTC7A-202ENST00000394850 PABPN1Q86U42 306 aaKnown RBP eCLIP20.83■□□□□ 0.93
TTC7A-202ENST00000394850 FAM50AQ14320 339 aaKnown RBP20.81■□□□□ 0.92
TTC7A-202ENST00000394850 CSRNP3Q8WYN3 585 aa20.75■□□□□ 0.91
TTC7A-202ENST00000394850 ZCCHC6Q5VYS8 1495 aaKnown RBP20.75■□□□□ 0.91
TTC7A-202ENST00000394850 MIER1Q8N108 512 aa20.73■□□□□ 0.91
TTC7A-202ENST00000394850 ANP32CO43423 234 aa20.64■□□□□ 0.89
TTC7A-202ENST00000394850 FKBP8Q14318 412 aa20.61■□□□□ 0.89
TTC7A-202ENST00000394850 DAXXQ9UER7 740 aaPredicted RBP20.6■□□□□ 0.89
TTC7A-202ENST00000394850 RTL5Q5HYW3 569 aaPredicted RBP20.59■□□□□ 0.89
TTC7A-202ENST00000394850 CDK11AQ9UQ88 783 aaPredicted RBP20.56■□□□□ 0.88
TTC7A-202ENST00000394850 TRIM52Q96A61 297 aa20.51■□□□□ 0.87
TTC7A-202ENST00000394850 DDX10Q13206 875 aaKnown RBP20.5■□□□□ 0.87
TTC7A-202ENST00000394850 P3H3Q8IVL6 736 aa20.45■□□□□ 0.86
TTC7A-202ENST00000394850 RB1CC1Q8TDY2 1594 aa20.39■□□□□ 0.86
TTC7A-202ENST00000394850 ZNF326Q5BKZ1 582 aaKnown RBP20.38■□□□□ 0.85
TTC7A-202ENST00000394850 SCRIBQ14160 1630 aa20.37■□□□□ 0.85
TTC7A-202ENST00000394850 HIRIP3Q9BW71 556 aaPredicted RBP20.37■□□□□ 0.85
TTC7A-202ENST00000394850 HNRNPUQ00839 825 aaKnown RBP eCLIP20.32■□□□□ 0.84
TTC7A-202ENST00000394850 CLSPNQ9HAW4 1339 aa20.3■□□□□ 0.84
TTC7A-202ENST00000394850 IRX6P78412 446 aaPredicted RBP20.28■□□□□ 0.84
TTC7A-202ENST00000394850 RSF1Q96T23 1441 aaPredicted RBP20.27■□□□□ 0.83
TTC7A-202ENST00000394850 NACADO15069 1562 aa20.26■□□□□ 0.83
TTC7A-202ENST00000394850 ARID3CA6NKF2 412 aa20.22■□□□□ 0.83
TTC7A-202ENST00000394850 NPM2Q86SE8 214 aaKnown RBP20.2■□□□□ 0.82
TTC7A-202ENST00000394850 FAM9BQ8IZU0 186 aa20.18■□□□□ 0.82
TTC7A-202ENST00000394850 CEP162Q5TB80 1403 aa20.18■□□□□ 0.82
TTC7A-202ENST00000394850 MYT1LQ9UL68 1186 aa20.16■□□□□ 0.82
TTC7A-202ENST00000394850 NBR1Q14596 966 aa20.14■□□□□ 0.81
TTC7A-202ENST00000394850 ANP32AP39687 249 aaKnown RBP20.13■□□□□ 0.81
TTC7A-202ENST00000394850 TONSLQ96HA7 1378 aa20.11■□□□□ 0.81
TTC7A-202ENST00000394850 SLC4A1APQ9BWU0 796 aaKnown RBP20.11■□□□□ 0.81
TTC7A-202ENST00000394850 ANP32EQ9BTT0 268 aa20.11■□□□□ 0.81
TTC7A-202ENST00000394850 SUPT16HQ9Y5B9 1047 aaKnown RBP20.11■□□□□ 0.81
TTC7A-202ENST00000394850 CLIP1P30622 1438 aa20.09■□□□□ 0.81
TTC7A-202ENST00000394850 SALL2Q9Y467 1007 aaPredicted RBP20.05■□□□□ 0.8
TTC7A-202ENST00000394850 SENP3-EIF4A1A0A087X0R7 540 aa20■□□□□ 0.79
TTC7A-202ENST00000394850 CHIC2Q9UKJ5 165 aa19.98■□□□□ 0.79
TTC7A-202ENST00000394850 EIF5BO60841 1220 aaKnown RBP19.95■□□□□ 0.78
TTC7A-202ENST00000394850 CCDC136Q96JN2 1154 aa19.95■□□□□ 0.78
TTC7A-202ENST00000394850 MRS2Q9HD23 443 aa19.95■□□□□ 0.78
TTC7A-202ENST00000394850 TNIKQ9UKE5 1360 aa19.92■□□□□ 0.78
TTC7A-202ENST00000394850 SIN3AQ96ST3 1273 aa19.91■□□□□ 0.78
TTC7A-202ENST00000394850 ZNF777Q9ULD5 760 aaPredicted RBP19.88■□□□□ 0.77
TTC7A-202ENST00000394850 ZBTB47Q9UFB7 747 aaPredicted RBP19.87■□□□□ 0.77
TTC7A-202ENST00000394850 GOLGA3Q08378 1498 aa19.87■□□□□ 0.77
TTC7A-202ENST00000394850 BCL11AQ9H165 835 aa19.85■□□□□ 0.77
TTC7A-202ENST00000394850 SOGA1O94964 1423 aa19.83■□□□□ 0.76
TTC7A-202ENST00000394850 CECR2Q9BXF3 1484 aa19.81■□□□□ 0.76
TTC7A-202ENST00000394850 TMC1Q8TDI8 760 aa19.8■□□□□ 0.76
TTC7A-202ENST00000394850 FBLN2P98095 1184 aa19.78■□□□□ 0.76
TTC7A-202ENST00000394850 CANXP27824 592 aaKnown RBP19.77■□□□□ 0.76
TTC7A-202ENST00000394850 TSHZ2Q9NRE2 1034 aa19.77■□□□□ 0.76
TTC7A-202ENST00000394850 EEA1Q15075 1411 aa19.76■□□□□ 0.75
TTC7A-202ENST00000394850 RBM19Q9Y4C8 960 aaKnown RBP19.75■□□□□ 0.75
TTC7A-202ENST00000394850 RRP7BPQ9NSQ0 103 aa19.75■□□□□ 0.75
TTC7A-202ENST00000394850 WRNQ14191 1432 aaPredicted RBP eCLIP19.74■□□□□ 0.75
TTC7A-202ENST00000394850 EIF4G2P78344 907 aaKnown RBP eCLIP19.72■□□□□ 0.75
TTC7A-202ENST00000394850 B4GALNT3Q6L9W6 998 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms