RNA–Protein interactions for RNA: ENST00000369636.6

RHOC-205, Transcript of ras homolog family member C, humanhuman

TSL 2 BASIC

Gene RHOC, Length 786 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHOC-205ENST00000369636 NISCHQ9Y2I1 1504 aa32.59■■■□□ 2.81
RHOC-205ENST00000369636 CCDC180Q9P1Z9 1646 aa29.13■■■□□ 2.25
RHOC-205ENST00000369636 ABCC9O60706 1549 aa28.43■■■□□ 2.14
RHOC-205ENST00000369636 DCAF8L2P0C7V8 631 aa27.58■■■□□ 2.01
RHOC-205ENST00000369636 RB1CC1Q8TDY2 1594 aa27.27■■□□□ 1.96
RHOC-205ENST00000369636 NACADO15069 1562 aa27.18■■□□□ 1.94
RHOC-205ENST00000369636 ZCCHC6Q5VYS8 1495 aaKnown RBP27.15■■□□□ 1.94
RHOC-205ENST00000369636 UNC13AQ9UPW8 1703 aa27.06■■□□□ 1.92
RHOC-205ENST00000369636 MYO15BQ96JP2 1530 aa26.93■■□□□ 1.9
RHOC-205ENST00000369636 DCAF1Q9Y4B6 1507 aa26.87■■□□□ 1.89
RHOC-205ENST00000369636 PABPN1Q86U42 306 aaKnown RBP eCLIP26.7■■□□□ 1.86
RHOC-205ENST00000369636 SCRIBQ14160 1630 aa26.59■■□□□ 1.85
RHOC-205ENST00000369636 BICRAQ9NZM4 1560 aa26.54■■□□□ 1.84
RHOC-205ENST00000369636 DNAJC5BQ9UF47 199 aa26.2■■□□□ 1.78
RHOC-205ENST00000369636 SHROOM4Q9ULL8 1493 aa26.04■■□□□ 1.76
RHOC-205ENST00000369636 EIF4G1Q04637 1599 aaKnown RBP25.78■■□□□ 1.72
RHOC-205ENST00000369636 CC2D2AQ9P2K1 1620 aa25.71■■□□□ 1.71
RHOC-205ENST00000369636 CECR2Q9BXF3 1484 aa25.5■■□□□ 1.67
RHOC-205ENST00000369636 SMARCA4P51532 1647 aa25.39■■□□□ 1.66
RHOC-205ENST00000369636 BAZ1AQ9NRL2 1556 aaPredicted RBP25.24■■□□□ 1.63
RHOC-205ENST00000369636 MROH2BQ7Z745 1585 aa25.18■■□□□ 1.62
RHOC-205ENST00000369636 ATAD2BQ9ULI0 1458 aa25.15■■□□□ 1.62
RHOC-205ENST00000369636 NCAPD3P42695 1498 aa25.09■■□□□ 1.61
RHOC-205ENST00000369636 SMARCA2P51531 1590 aa25.08■■□□□ 1.61
RHOC-205ENST00000369636 PEG3Q9GZU2 1588 aa25.04■■□□□ 1.6
RHOC-205ENST00000369636 HMGXB3Q12766 1538 aa25.02■■□□□ 1.6
RHOC-205ENST00000369636 WIZO95785 1651 aa25.01■■□□□ 1.59
RHOC-205ENST00000369636 BAZ1BQ9UIG0 1483 aaKnown RBP24.94■■□□□ 1.58
RHOC-205ENST00000369636 RSF1Q96T23 1441 aaPredicted RBP24.9■■□□□ 1.58
RHOC-205ENST00000369636 TOP2AP11388 1531 aaKnown RBP24.62■■□□□ 1.53
RHOC-205ENST00000369636 NESP48681 1621 aa24.62■■□□□ 1.53
RHOC-205ENST00000369636 SUPT5HO00267 1087 aaKnown RBP24.55■■□□□ 1.52
RHOC-205ENST00000369636 KIF21AQ7Z4S6 1674 aa24.52■■□□□ 1.52
RHOC-205ENST00000369636 LAMC3Q9Y6N6 1575 aa24.47■■□□□ 1.51
RHOC-205ENST00000369636 PRDM2Q13029 1718 aa24.45■■□□□ 1.5
RHOC-205ENST00000369636 ERCC6Q03468 1493 aa24.45■■□□□ 1.5
RHOC-205ENST00000369636 CADPSQ9ULU8 1353 aa24.42■■□□□ 1.5
RHOC-205ENST00000369636 CCDC88BA6NC98 1476 aa24.38■■□□□ 1.49
RHOC-205ENST00000369636 THOC2Q8NI27 1593 aaKnown RBP24.31■■□□□ 1.48
RHOC-205ENST00000369636 PDS5BQ9NTI5 1447 aa24.29■■□□□ 1.48
RHOC-205ENST00000369636 CFTRP13569 1480 aa24.24■■□□□ 1.47
RHOC-205ENST00000369636 FANCD2Q9BXW9 1451 aa24.13■■□□□ 1.45
RHOC-205ENST00000369636 CUX2O14529 1486 aa24.07■■□□□ 1.44
RHOC-205ENST00000369636 CEP164Q9UPV0 1460 aa24.07■■□□□ 1.44
RHOC-205ENST00000369636 MRC2Q9UBG0 1479 aa24.02■■□□□ 1.44
RHOC-205ENST00000369636 WDR62O43379 1518 aa23.99■■□□□ 1.43
RHOC-205ENST00000369636 URB2Q14146 1524 aaKnown RBP23.9■■□□□ 1.42
RHOC-205ENST00000369636 DNMBPQ6XZF7 1577 aa23.75■■□□□ 1.39
RHOC-205ENST00000369636 TOPBP1Q92547 1522 aa23.74■■□□□ 1.39
RHOC-205ENST00000369636 ABCC8Q09428 1581 aa23.67■■□□□ 1.38
RHOC-205ENST00000369636 CUX1P39880 1505 aa23.6■■□□□ 1.37
RHOC-205ENST00000369636 TARBP1Q13395 1621 aaKnown RBP23.56■■□□□ 1.36
RHOC-205ENST00000369636 IFT140Q96RY7 1462 aa23.55■■□□□ 1.36
RHOC-205ENST00000369636 RAD54L2Q9Y4B4 1467 aa23.55■■□□□ 1.36
RHOC-205ENST00000369636 WDR97A6NE52 1622 aa23.55■■□□□ 1.36
RHOC-205ENST00000369636 ZNF608Q9ULD9 1512 aaPredicted RBP23.54■■□□□ 1.36
RHOC-205ENST00000369636 POLA1P09884 1462 aaPredicted RBP23.54■■□□□ 1.36
RHOC-205ENST00000369636 EIF4G3O43432 1585 aaKnown RBP23.53■■□□□ 1.36
RHOC-205ENST00000369636 SOGA1O94964 1423 aa23.52■■□□□ 1.36
RHOC-205ENST00000369636 BIVM-ERCC5R4GMW8 1640 aa23.51■■□□□ 1.35
RHOC-205ENST00000369636 FGD5Q6ZNL6 1462 aa23.51■■□□□ 1.35
RHOC-205ENST00000369636 SYNJ1O43426 1573 aa23.48■■□□□ 1.35
RHOC-205ENST00000369636 DNAJC5Q9H3Z4 198 aa23.47■■□□□ 1.35
RHOC-205ENST00000369636 AQRO60306 1485 aaKnown RBP eCLIP23.46■■□□□ 1.354e-7■■■■■ 38.2
RHOC-205ENST00000369636 WRNQ14191 1432 aaPredicted RBP eCLIP23.46■■□□□ 1.356e-6■■■□□ 16.7
RHOC-205ENST00000369636 TDRD9Q8NDG6 1382 aaKnown RBP23.44■■□□□ 1.34
RHOC-205ENST00000369636 TOP2BQ02880 1626 aa23.42■■□□□ 1.34
RHOC-205ENST00000369636 PBRM1Q86U86 1689 aa23.4■■□□□ 1.34
RHOC-205ENST00000369636 CHD1O14646 1710 aa23.38■■□□□ 1.33
RHOC-205ENST00000369636 FBLN2P98095 1184 aa23.3■■□□□ 1.32
RHOC-205ENST00000369636 ABCA5Q8WWZ7 1642 aa23.28■■□□□ 1.32
RHOC-205ENST00000369636 OSCARQ8IYS5 282 aa23.27■■□□□ 1.32
RHOC-205ENST00000369636 ABCA10Q8WWZ4 1543 aa23.23■■□□□ 1.31
RHOC-205ENST00000369636 GAPVD1Q14C86 1478 aa23.2■■□□□ 1.3
RHOC-205ENST00000369636 GRIN2BQ13224 1484 aa23.16■■□□□ 1.3
RHOC-205ENST00000369636 CHMP7Q8WUX9 453 aaPredicted RBP23.15■■□□□ 1.3
RHOC-205ENST00000369636 SNAPC4Q5SXM2 1469 aa23.15■■□□□ 1.3
RHOC-205ENST00000369636 TRIM41Q8WV44 630 aa23.1■■□□□ 1.29
RHOC-205ENST00000369636 ADAMTS12P58397 1594 aa23.06■■□□□ 1.28
RHOC-205ENST00000369636 MAGI1Q96QZ7 1491 aaPredicted RBP23.04■■□□□ 1.28
RHOC-205ENST00000369636 SYNJ2O15056 1496 aa22.98■■□□□ 1.27
RHOC-205ENST00000369636 KIF27Q86VH2 1401 aa22.96■■□□□ 1.27
RHOC-205ENST00000369636 IGF1RP08069 1367 aa22.94■■□□□ 1.26
RHOC-205ENST00000369636 ERICH3Q5RHP9 1530 aa22.93■■□□□ 1.26
RHOC-205ENST00000369636 RIMBP3CA6NJZ7 1639 aa22.91■■□□□ 1.26
RHOC-205ENST00000369636 RIMBP3BA6NNM3 1639 aa22.91■■□□□ 1.26
RHOC-205ENST00000369636 RIMBP3Q9UFD9 1639 aa22.91■■□□□ 1.26
RHOC-205ENST00000369636 FHAD1B1AJZ9 1412 aa22.91■■□□□ 1.26
RHOC-205ENST00000369636 RUSC2Q8N2Y8 1516 aa22.9■■□□□ 1.26
RHOC-205ENST00000369636 CLASP1Q7Z460 1538 aa22.89■■□□□ 1.26
RHOC-205ENST00000369636 CUL7Q14999 1698 aa22.87■■□□□ 1.25
RHOC-205ENST00000369636 CHIC1Q5VXU3 224 aa22.86■■□□□ 1.25
RHOC-205ENST00000369636 GRIN2AQ12879 1464 aa22.85■■□□□ 1.25
RHOC-205ENST00000369636 CEP170Q5SW79 1584 aa22.84■■□□□ 1.25
RHOC-205ENST00000369636 CARMIL1Q5VZK9 1371 aa22.8■■□□□ 1.24
RHOC-205ENST00000369636 ARHGEF11O15085 1522 aa22.79■■□□□ 1.24
RHOC-205ENST00000369636 CYB5RLQ6IPT4 315 aa22.76■■□□□ 1.23
RHOC-205ENST00000369636 FAM9AQ8IZU1 332 aaPredicted RBP22.75■■□□□ 1.23
RHOC-205ENST00000369636 NUP160Q12769 1436 aa22.73■■□□□ 1.23
RHOC-205ENST00000369636 SHROOM2Q13796 1616 aa22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms