RNA–Protein interactions for RNA: ENST00000427683.2

EFNA4-203, Transcript of ephrin A4, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene EFNA4, Length 1,052 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA4-203ENST00000427683 NISCHQ9Y2I1 1504 aa32.83■■■□□ 2.85
EFNA4-203ENST00000427683 ABCC9O60706 1549 aa29.55■■■□□ 2.32
EFNA4-203ENST00000427683 CCDC180Q9P1Z9 1646 aa29.23■■■□□ 2.27
EFNA4-203ENST00000427683 DNAJC5BQ9UF47 199 aa28.22■■■□□ 2.11
EFNA4-203ENST00000427683 RB1CC1Q8TDY2 1594 aa27.87■■■□□ 2.05
EFNA4-203ENST00000427683 NACADO15069 1562 aa27.56■■■□□ 2
EFNA4-203ENST00000427683 DCAF8L2P0C7V8 631 aa27.47■■□□□ 1.99
EFNA4-203ENST00000427683 ZCCHC6Q5VYS8 1495 aaKnown RBP27.44■■□□□ 1.98
EFNA4-203ENST00000427683 UNC13AQ9UPW8 1703 aa27.36■■□□□ 1.97
EFNA4-203ENST00000427683 PABPN1Q86U42 306 aaKnown RBP eCLIP27.35■■□□□ 1.97
EFNA4-203ENST00000427683 MYO15BQ96JP2 1530 aa27.26■■□□□ 1.95
EFNA4-203ENST00000427683 DCAF1Q9Y4B6 1507 aa27.22■■□□□ 1.95
EFNA4-203ENST00000427683 BICRAQ9NZM4 1560 aa27.21■■□□□ 1.95
EFNA4-203ENST00000427683 SHROOM4Q9ULL8 1493 aa26.71■■□□□ 1.87
EFNA4-203ENST00000427683 CC2D2AQ9P2K1 1620 aa26.71■■□□□ 1.87
EFNA4-203ENST00000427683 SCRIBQ14160 1630 aa26.68■■□□□ 1.86
EFNA4-203ENST00000427683 CECR2Q9BXF3 1484 aa26.68■■□□□ 1.86
EFNA4-203ENST00000427683 EIF4G1Q04637 1599 aaKnown RBP26.53■■□□□ 1.84
EFNA4-203ENST00000427683 DNAJC5Q9H3Z4 198 aa26.22■■□□□ 1.79
EFNA4-203ENST00000427683 CUX2O14529 1486 aa25.69■■□□□ 1.7
EFNA4-203ENST00000427683 ERCC6Q03468 1493 aa25.49■■□□□ 1.67
EFNA4-203ENST00000427683 SMARCA4P51532 1647 aa25.48■■□□□ 1.67
EFNA4-203ENST00000427683 NCAPD3P42695 1498 aa25.45■■□□□ 1.66
EFNA4-203ENST00000427683 BAZ1AQ9NRL2 1556 aaPredicted RBP25.41■■□□□ 1.66
EFNA4-203ENST00000427683 ATAD2BQ9ULI0 1458 aa25.37■■□□□ 1.65
EFNA4-203ENST00000427683 SMARCA2P51531 1590 aa25.35■■□□□ 1.65
EFNA4-203ENST00000427683 MROH2BQ7Z745 1585 aa25.31■■□□□ 1.64
EFNA4-203ENST00000427683 NESP48681 1621 aa25.28■■□□□ 1.64
EFNA4-203ENST00000427683 HMGXB3Q12766 1538 aa25.27■■□□□ 1.64
EFNA4-203ENST00000427683 PEG3Q9GZU2 1588 aa25.21■■□□□ 1.63
EFNA4-203ENST00000427683 RSF1Q96T23 1441 aaPredicted RBP25.2■■□□□ 1.63
EFNA4-203ENST00000427683 THOC2Q8NI27 1593 aaKnown RBP25.2■■□□□ 1.62
EFNA4-203ENST00000427683 BAZ1BQ9UIG0 1483 aaKnown RBP25.17■■□□□ 1.62
EFNA4-203ENST00000427683 WIZO95785 1651 aa25■■□□□ 1.59
EFNA4-203ENST00000427683 LAMC3Q9Y6N6 1575 aa24.97■■□□□ 1.59
EFNA4-203ENST00000427683 KIF21AQ7Z4S6 1674 aa24.95■■□□□ 1.58
EFNA4-203ENST00000427683 TRIM41Q8WV44 630 aa24.8■■□□□ 1.56
EFNA4-203ENST00000427683 SUPT5HO00267 1087 aaKnown RBP24.78■■□□□ 1.56
EFNA4-203ENST00000427683 TOP2AP11388 1531 aaKnown RBP24.77■■□□□ 1.56
EFNA4-203ENST00000427683 PDS5BQ9NTI5 1447 aa24.76■■□□□ 1.55
EFNA4-203ENST00000427683 WDR62O43379 1518 aa24.69■■□□□ 1.54
EFNA4-203ENST00000427683 MRC2Q9UBG0 1479 aa24.67■■□□□ 1.54
EFNA4-203ENST00000427683 CADPSQ9ULU8 1353 aa24.63■■□□□ 1.53
EFNA4-203ENST00000427683 CCDC88BA6NC98 1476 aa24.53■■□□□ 1.52
EFNA4-203ENST00000427683 CFTRP13569 1480 aa24.44■■□□□ 1.5
EFNA4-203ENST00000427683 CEP164Q9UPV0 1460 aa24.44■■□□□ 1.5
EFNA4-203ENST00000427683 FANCD2Q9BXW9 1451 aa24.38■■□□□ 1.49
EFNA4-203ENST00000427683 PRDM2Q13029 1718 aa24.3■■□□□ 1.48
EFNA4-203ENST00000427683 URB2Q14146 1524 aaKnown RBP24.27■■□□□ 1.48
EFNA4-203ENST00000427683 OSCARQ8IYS5 282 aa24.26■■□□□ 1.47
EFNA4-203ENST00000427683 RIMBP3CA6NJZ7 1639 aa24.22■■□□□ 1.47
EFNA4-203ENST00000427683 RIMBP3BA6NNM3 1639 aa24.22■■□□□ 1.47
EFNA4-203ENST00000427683 RIMBP3Q9UFD9 1639 aa24.22■■□□□ 1.47
EFNA4-203ENST00000427683 ARHGEF11O15085 1522 aa24.08■■□□□ 1.45
EFNA4-203ENST00000427683 ZNF608Q9ULD9 1512 aaPredicted RBP24.05■■□□□ 1.44
EFNA4-203ENST00000427683 TOPBP1Q92547 1522 aa23.96■■□□□ 1.43
EFNA4-203ENST00000427683 IFT140Q96RY7 1462 aa23.96■■□□□ 1.43
EFNA4-203ENST00000427683 EIF4G3O43432 1585 aaKnown RBP23.92■■□□□ 1.42
EFNA4-203ENST00000427683 ABCC8Q09428 1581 aa23.92■■□□□ 1.42
EFNA4-203ENST00000427683 DNMBPQ6XZF7 1577 aa23.92■■□□□ 1.42
EFNA4-203ENST00000427683 ARAP1Q96P48 1450 aa23.83■■□□□ 1.41
EFNA4-203ENST00000427683 CHD1O14646 1710 aa23.82■■□□□ 1.4
EFNA4-203ENST00000427683 CYB5RLQ6IPT4 315 aa23.76■■□□□ 1.39
EFNA4-203ENST00000427683 TARBP1Q13395 1621 aaKnown RBP23.75■■□□□ 1.39
EFNA4-203ENST00000427683 POLA1P09884 1462 aaPredicted RBP23.74■■□□□ 1.39
EFNA4-203ENST00000427683 CUX1P39880 1505 aa23.7■■□□□ 1.38
EFNA4-203ENST00000427683 AQRO60306 1485 aaKnown RBP eCLIP23.69■■□□□ 1.38
EFNA4-203ENST00000427683 WRNQ14191 1432 aaPredicted RBP eCLIP23.69■■□□□ 1.38
EFNA4-203ENST00000427683 FGD5Q6ZNL6 1462 aa23.67■■□□□ 1.38
EFNA4-203ENST00000427683 RAD54L2Q9Y4B4 1467 aa23.65■■□□□ 1.38
EFNA4-203ENST00000427683 SOGA1O94964 1423 aa23.63■■□□□ 1.37
EFNA4-203ENST00000427683 TRHP20396 242 aaPredicted RBP23.61■■□□□ 1.37
EFNA4-203ENST00000427683 SYNJ1O43426 1573 aa23.61■■□□□ 1.37
EFNA4-203ENST00000427683 TOP2BQ02880 1626 aa23.59■■□□□ 1.37
EFNA4-203ENST00000427683 CLASP1Q7Z460 1538 aa23.57■■□□□ 1.36
EFNA4-203ENST00000427683 BIVM-ERCC5R4GMW8 1640 aa23.56■■□□□ 1.36
EFNA4-203ENST00000427683 TDRD9Q8NDG6 1382 aaKnown RBP23.53■■□□□ 1.36
EFNA4-203ENST00000427683 WDR97A6NE52 1622 aa23.51■■□□□ 1.35
EFNA4-203ENST00000427683 FBLN2P98095 1184 aa23.49■■□□□ 1.35
EFNA4-203ENST00000427683 SNAPC4Q5SXM2 1469 aa23.49■■□□□ 1.35
EFNA4-203ENST00000427683 CHIC1Q5VXU3 224 aa23.48■■□□□ 1.35
EFNA4-203ENST00000427683 ABCA10Q8WWZ4 1543 aa23.4■■□□□ 1.34
EFNA4-203ENST00000427683 GRIN2BQ13224 1484 aa23.39■■□□□ 1.34
EFNA4-203ENST00000427683 GAPVD1Q14C86 1478 aa23.36■■□□□ 1.33
EFNA4-203ENST00000427683 MAGI1Q96QZ7 1491 aaPredicted RBP23.36■■□□□ 1.33
EFNA4-203ENST00000427683 PBRM1Q86U86 1689 aa23.36■■□□□ 1.33
EFNA4-203ENST00000427683 ABCA5Q8WWZ7 1642 aa23.35■■□□□ 1.33
EFNA4-203ENST00000427683 SYNJ2O15056 1496 aa23.3■■□□□ 1.32
EFNA4-203ENST00000427683 AEBP2Q6ZN18 517 aaPredicted RBP23.27■■□□□ 1.32
EFNA4-203ENST00000427683 CHMP7Q8WUX9 453 aaPredicted RBP23.26■■□□□ 1.31
EFNA4-203ENST00000427683 ERCC6L2Q5T890 1561 aa23.18■■□□□ 1.3
EFNA4-203ENST00000427683 ADAMTS12P58397 1594 aa23.16■■□□□ 1.3
EFNA4-203ENST00000427683 KIF27Q86VH2 1401 aa23.15■■□□□ 1.3
EFNA4-203ENST00000427683 ERICH3Q5RHP9 1530 aa23.13■■□□□ 1.29
EFNA4-203ENST00000427683 RUSC2Q8N2Y8 1516 aa23.13■■□□□ 1.29
EFNA4-203ENST00000427683 IGF1RP08069 1367 aa23.11■■□□□ 1.29
EFNA4-203ENST00000427683 GRIN2AQ12879 1464 aa23.1■■□□□ 1.29
EFNA4-203ENST00000427683 FHAD1B1AJZ9 1412 aa23.08■■□□□ 1.28
EFNA4-203ENST00000427683 CEP170Q5SW79 1584 aa23.03■■□□□ 1.28
EFNA4-203ENST00000427683 EEA1Q15075 1411 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms