RNA–Protein interactions for RNA: ENST00000597584.5

SNAPC2-206, Transcript of small nuclear RNA activating complex polypeptide 2, humanhuman

TSL 1 (best) BASIC

Gene SNAPC2, Length 1,413 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC2-206ENST00000597584 NISCHQ9Y2I1 1504 aa32.67■■■□□ 2.82
SNAPC2-206ENST00000597584 CCDC180Q9P1Z9 1646 aa28.75■■■□□ 2.19
SNAPC2-206ENST00000597584 ABCC9O60706 1549 aa27.92■■■□□ 2.06
SNAPC2-206ENST00000597584 DCAF8L2P0C7V8 631 aa27.38■■□□□ 1.97
SNAPC2-206ENST00000597584 ZCCHC6Q5VYS8 1495 aaKnown RBP27.25■■□□□ 1.95
SNAPC2-206ENST00000597584 NACADO15069 1562 aa27.02■■□□□ 1.92
SNAPC2-206ENST00000597584 DCAF1Q9Y4B6 1507 aa26.99■■□□□ 1.91
SNAPC2-206ENST00000597584 MYO15BQ96JP2 1530 aa26.95■■□□□ 1.91
SNAPC2-206ENST00000597584 RB1CC1Q8TDY2 1594 aa26.94■■□□□ 1.9
SNAPC2-206ENST00000597584 SCRIBQ14160 1630 aa26.35■■□□□ 1.81
SNAPC2-206ENST00000597584 UNC13AQ9UPW8 1703 aa26.27■■□□□ 1.8
SNAPC2-206ENST00000597584 PABPN1Q86U42 306 aaKnown RBP eCLIP26.26■■□□□ 1.79
SNAPC2-206ENST00000597584 SHROOM4Q9ULL8 1493 aa26.18■■□□□ 1.78
SNAPC2-206ENST00000597584 BICRAQ9NZM4 1560 aa26.1■■□□□ 1.77
SNAPC2-206ENST00000597584 CECR2Q9BXF3 1484 aa25.45■■□□□ 1.67
SNAPC2-206ENST00000597584 EIF4G1Q04637 1599 aaKnown RBP25.4■■□□□ 1.66
SNAPC2-206ENST00000597584 DNAJC5BQ9UF47 199 aa25.36■■□□□ 1.65
SNAPC2-206ENST00000597584 BAZ1AQ9NRL2 1556 aaPredicted RBP25.27■■□□□ 1.64
SNAPC2-206ENST00000597584 SMARCA4P51532 1647 aa25.22■■□□□ 1.63
SNAPC2-206ENST00000597584 CC2D2AQ9P2K1 1620 aa25.21■■□□□ 1.63
SNAPC2-206ENST00000597584 MROH2BQ7Z745 1585 aa25.2■■□□□ 1.62
SNAPC2-206ENST00000597584 RSF1Q96T23 1441 aaPredicted RBP25.08■■□□□ 1.61
SNAPC2-206ENST00000597584 ATAD2BQ9ULI0 1458 aa25.04■■□□□ 1.6
SNAPC2-206ENST00000597584 SMARCA2P51531 1590 aa24.99■■□□□ 1.59
SNAPC2-206ENST00000597584 NCAPD3P42695 1498 aa24.97■■□□□ 1.59
SNAPC2-206ENST00000597584 PEG3Q9GZU2 1588 aa24.94■■□□□ 1.58
SNAPC2-206ENST00000597584 WIZO95785 1651 aa24.93■■□□□ 1.58
SNAPC2-206ENST00000597584 SUPT5HO00267 1087 aaKnown RBP24.89■■□□□ 1.58
SNAPC2-206ENST00000597584 BAZ1BQ9UIG0 1483 aaKnown RBP24.85■■□□□ 1.57
SNAPC2-206ENST00000597584 HMGXB3Q12766 1538 aa24.8■■□□□ 1.56
SNAPC2-206ENST00000597584 TOP2AP11388 1531 aaKnown RBP24.66■■□□□ 1.54
SNAPC2-206ENST00000597584 CCDC88BA6NC98 1476 aa24.45■■□□□ 1.5
SNAPC2-206ENST00000597584 CADPSQ9ULU8 1353 aa24.31■■□□□ 1.48
SNAPC2-206ENST00000597584 NESP48681 1621 aa24.26■■□□□ 1.47
SNAPC2-206ENST00000597584 CFTRP13569 1480 aa24.19■■□□□ 1.46
SNAPC2-206ENST00000597584 LAMC3Q9Y6N6 1575 aa24.19■■□□□ 1.46
SNAPC2-206ENST00000597584 PDS5BQ9NTI5 1447 aa24.1■■□□□ 1.45
SNAPC2-206ENST00000597584 ERCC6Q03468 1493 aa24.02■■□□□ 1.44
SNAPC2-206ENST00000597584 FANCD2Q9BXW9 1451 aa23.98■■□□□ 1.43
SNAPC2-206ENST00000597584 PRDM2Q13029 1718 aa23.9■■□□□ 1.42
SNAPC2-206ENST00000597584 CEP164Q9UPV0 1460 aa23.9■■□□□ 1.42
SNAPC2-206ENST00000597584 KIF21AQ7Z4S6 1674 aa23.89■■□□□ 1.42
SNAPC2-206ENST00000597584 MRC2Q9UBG0 1479 aa23.78■■□□□ 1.4
SNAPC2-206ENST00000597584 URB2Q14146 1524 aaKnown RBP23.71■■□□□ 1.39
SNAPC2-206ENST00000597584 THOC2Q8NI27 1593 aaKnown RBP23.7■■□□□ 1.38
SNAPC2-206ENST00000597584 ABCC8Q09428 1581 aa23.67■■□□□ 1.38
SNAPC2-206ENST00000597584 WDR62O43379 1518 aa23.64■■□□□ 1.37
SNAPC2-206ENST00000597584 TOPBP1Q92547 1522 aa23.64■■□□□ 1.37
SNAPC2-206ENST00000597584 WRNQ14191 1432 aaPredicted RBP eCLIP23.63■■□□□ 1.37
SNAPC2-206ENST00000597584 DNMBPQ6XZF7 1577 aa23.61■■□□□ 1.37
SNAPC2-206ENST00000597584 CUX1P39880 1505 aa23.59■■□□□ 1.37
SNAPC2-206ENST00000597584 CUX2O14529 1486 aa23.57■■□□□ 1.36
SNAPC2-206ENST00000597584 SYNJ1O43426 1573 aa23.49■■□□□ 1.35
SNAPC2-206ENST00000597584 TRIM41Q8WV44 630 aa23.49■■□□□ 1.35
SNAPC2-206ENST00000597584 FGD5Q6ZNL6 1462 aa23.47■■□□□ 1.35
SNAPC2-206ENST00000597584 TOP2BQ02880 1626 aa23.47■■□□□ 1.35
SNAPC2-206ENST00000597584 POLA1P09884 1462 aaPredicted RBP23.46■■□□□ 1.35
SNAPC2-206ENST00000597584 SOGA1O94964 1423 aa23.45■■□□□ 1.34
SNAPC2-206ENST00000597584 CHIC1Q5VXU3 224 aa23.44■■□□□ 1.34
SNAPC2-206ENST00000597584 BIVM-ERCC5R4GMW8 1640 aa23.43■■□□□ 1.34
SNAPC2-206ENST00000597584 RAD54L2Q9Y4B4 1467 aa23.4■■□□□ 1.34
SNAPC2-206ENST00000597584 IFT140Q96RY7 1462 aa23.4■■□□□ 1.34
SNAPC2-206ENST00000597584 TARBP1Q13395 1621 aaKnown RBP23.3■■□□□ 1.32
SNAPC2-206ENST00000597584 TDRD9Q8NDG6 1382 aaKnown RBP23.28■■□□□ 1.32
SNAPC2-206ENST00000597584 ZNF608Q9ULD9 1512 aaPredicted RBP23.26■■□□□ 1.31
SNAPC2-206ENST00000597584 ABCA10Q8WWZ4 1543 aa23.25■■□□□ 1.31
SNAPC2-206ENST00000597584 AQRO60306 1485 aaKnown RBP eCLIP23.24■■□□□ 1.311e-8■■■■□ 21.1
SNAPC2-206ENST00000597584 GAPVD1Q14C86 1478 aa23.14■■□□□ 1.29
SNAPC2-206ENST00000597584 WDR97A6NE52 1622 aa23.14■■□□□ 1.29
SNAPC2-206ENST00000597584 KIF27Q86VH2 1401 aa23.12■■□□□ 1.29
SNAPC2-206ENST00000597584 EIF4G3O43432 1585 aaKnown RBP23.11■■□□□ 1.29
SNAPC2-206ENST00000597584 GRIN2BQ13224 1484 aa23.06■■□□□ 1.28
SNAPC2-206ENST00000597584 RUSC2Q8N2Y8 1516 aa23.06■■□□□ 1.28
SNAPC2-206ENST00000597584 ABCA5Q8WWZ7 1642 aa23.05■■□□□ 1.28
SNAPC2-206ENST00000597584 IGF1RP08069 1367 aa23.02■■□□□ 1.28
SNAPC2-206ENST00000597584 FAM9AQ8IZU1 332 aaPredicted RBP23.02■■□□□ 1.28
SNAPC2-206ENST00000597584 FBLN2P98095 1184 aa22.98■■□□□ 1.27
SNAPC2-206ENST00000597584 SNAPC4Q5SXM2 1469 aa22.97■■□□□ 1.27
SNAPC2-206ENST00000597584 CSRNP3Q8WYN3 585 aa22.96■■□□□ 1.27
SNAPC2-206ENST00000597584 ERICH3Q5RHP9 1530 aa22.96■■□□□ 1.27
SNAPC2-206ENST00000597584 PBRM1Q86U86 1689 aa22.95■■□□□ 1.26
SNAPC2-206ENST00000597584 CHMP7Q8WUX9 453 aaPredicted RBP22.95■■□□□ 1.26
SNAPC2-206ENST00000597584 MAGI1Q96QZ7 1491 aaPredicted RBP22.93■■□□□ 1.26
SNAPC2-206ENST00000597584 EEA1Q15075 1411 aa22.92■■□□□ 1.26
SNAPC2-206ENST00000597584 CARMIL1Q5VZK9 1371 aa22.9■■□□□ 1.26
SNAPC2-206ENST00000597584 FHAD1B1AJZ9 1412 aa22.89■■□□□ 1.25
SNAPC2-206ENST00000597584 SYNJ2O15056 1496 aa22.85■■□□□ 1.25
SNAPC2-206ENST00000597584 OSCARQ8IYS5 282 aa22.82■■□□□ 1.24
SNAPC2-206ENST00000597584 ADAMTS12P58397 1594 aa22.81■■□□□ 1.24
SNAPC2-206ENST00000597584 CUL7Q14999 1698 aa22.79■■□□□ 1.24
SNAPC2-206ENST00000597584 GRIN2AQ12879 1464 aa22.75■■□□□ 1.23
SNAPC2-206ENST00000597584 RAPGEF2Q9Y4G8 1499 aa22.75■■□□□ 1.23
SNAPC2-206ENST00000597584 PRXQ9BXM0 1461 aa22.75■■□□□ 1.23
SNAPC2-206ENST00000597584 CHD1O14646 1710 aa22.74■■□□□ 1.23
SNAPC2-206ENST00000597584 EHMT2Q96KQ7 1210 aa22.72■■□□□ 1.23
SNAPC2-206ENST00000597584 NUP160Q12769 1436 aa22.63■■□□□ 1.21
SNAPC2-206ENST00000597584 UBTFP17480 764 aaKnown RBP22.61■■□□□ 1.21
SNAPC2-206ENST00000597584 CEP170Q5SW79 1584 aa22.6■■□□□ 1.21
SNAPC2-206ENST00000597584 KIF21BO75037 1637 aa22.59■■□□□ 1.21
SNAPC2-206ENST00000597584 GOLGA3Q08378 1498 aa22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms