RNA–Protein interactions for RNA: ENST00000457008.6

ERN2-202, Transcript of endoplasmic reticulum to nucleus signaling 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ERN2, Length 3,169 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERN2-202ENST00000457008 NISCHQ9Y2I1 1504 aa31.08■■■□□ 2.57
ERN2-202ENST00000457008 CCDC180Q9P1Z9 1646 aa26.47■■□□□ 1.83
ERN2-202ENST00000457008 ZCCHC6Q5VYS8 1495 aaKnown RBP26.35■■□□□ 1.81
ERN2-202ENST00000457008 SHROOM4Q9ULL8 1493 aa26.35■■□□□ 1.81
ERN2-202ENST00000457008 SUPT5HO00267 1087 aaKnown RBP25.86■■□□□ 1.73
ERN2-202ENST00000457008 DCAF1Q9Y4B6 1507 aa25.59■■□□□ 1.69
ERN2-202ENST00000457008 DCAF8L2P0C7V8 631 aa25.42■■□□□ 1.66
ERN2-202ENST00000457008 MYO15BQ96JP2 1530 aa25.3■■□□□ 1.64
ERN2-202ENST00000457008 CHIC1Q5VXU3 224 aa25.3■■□□□ 1.64
ERN2-202ENST00000457008 ABCC9O60706 1549 aa24.91■■□□□ 1.58
ERN2-202ENST00000457008 HRCP23327 699 aa24.7■■□□□ 1.55
ERN2-202ENST00000457008 SCRIBQ14160 1630 aa24.7■■□□□ 1.54
ERN2-202ENST00000457008 RSF1Q96T23 1441 aaPredicted RBP24.6■■□□□ 1.53
ERN2-202ENST00000457008 PCGF6Q9BYE7 350 aa24.54■■□□□ 1.52
ERN2-202ENST00000457008 LOC105371045A0A1W2PR82 267 aa24.48■■□□□ 1.51
ERN2-202ENST00000457008 RB1CC1Q8TDY2 1594 aa24.4■■□□□ 1.5
ERN2-202ENST00000457008 NACADO15069 1562 aa24.39■■□□□ 1.5
ERN2-202ENST00000457008 CECR2Q9BXF3 1484 aa24.17■■□□□ 1.46
ERN2-202ENST00000457008 TRIM41Q8WV44 630 aa24.13■■□□□ 1.45
ERN2-202ENST00000457008 MROH2BQ7Z745 1585 aa24.13■■□□□ 1.45
ERN2-202ENST00000457008 TRIM26Q12899 539 aaPredicted RBP24.13■■□□□ 1.45
ERN2-202ENST00000457008 PPARGC1BQ86YN6 1023 aaKnown RBP24.08■■□□□ 1.45
ERN2-202ENST00000457008 WIZO95785 1651 aa24.02■■□□□ 1.44
ERN2-202ENST00000457008 BAZ1AQ9NRL2 1556 aaPredicted RBP23.95■■□□□ 1.42
ERN2-202ENST00000457008 EIF4G1Q04637 1599 aaKnown RBP23.87■■□□□ 1.41
ERN2-202ENST00000457008 FAM9AQ8IZU1 332 aaPredicted RBP23.85■■□□□ 1.41
ERN2-202ENST00000457008 TOP2AP11388 1531 aaKnown RBP23.69■■□□□ 1.38
ERN2-202ENST00000457008 SMARCA4P51532 1647 aa23.67■■□□□ 1.38
ERN2-202ENST00000457008 ZEB1P37275 1124 aaPredicted RBP23.66■■□□□ 1.38
ERN2-202ENST00000457008 UNC13AQ9UPW8 1703 aa23.65■■□□□ 1.38
ERN2-202ENST00000457008 EHMT2Q96KQ7 1210 aa23.57■■□□□ 1.36
ERN2-202ENST00000457008 SMARCA2P51531 1590 aa23.56■■□□□ 1.36
ERN2-202ENST00000457008 CCDC88BA6NC98 1476 aa23.54■■□□□ 1.36
ERN2-202ENST00000457008 ABCC8Q09428 1581 aa23.49■■□□□ 1.35
ERN2-202ENST00000457008 BICRAQ9NZM4 1560 aa23.32■■□□□ 1.32
ERN2-202ENST00000457008 WRNQ14191 1432 aaPredicted RBP eCLIP23.31■■□□□ 1.32
ERN2-202ENST00000457008 PEG3Q9GZU2 1588 aa23.28■■□□□ 1.32
ERN2-202ENST00000457008 SOGA1O94964 1423 aa23.26■■□□□ 1.31
ERN2-202ENST00000457008 EEA1Q15075 1411 aa23.24■■□□□ 1.31
ERN2-202ENST00000457008 CEP162Q5TB80 1403 aa23.23■■□□□ 1.31
ERN2-202ENST00000457008 TNIKQ9UKE5 1360 aa23.2■■□□□ 1.3
ERN2-202ENST00000457008 RUSC2Q8N2Y8 1516 aa23.14■■□□□ 1.29
ERN2-202ENST00000457008 PABPN1Q86U42 306 aaKnown RBP eCLIP23.11■■□□□ 1.29
ERN2-202ENST00000457008 CSRNP3Q8WYN3 585 aa23.1■■□□□ 1.29
ERN2-202ENST00000457008 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.07■■□□□ 1.28
ERN2-202ENST00000457008 GOLGA3Q08378 1498 aa23.06■■□□□ 1.28
ERN2-202ENST00000457008 SYNJ1O43426 1573 aa23.02■■□□□ 1.28
ERN2-202ENST00000457008 CCER1Q8TC90 406 aaPredicted RBP23.02■■□□□ 1.28
ERN2-202ENST00000457008 ATAD2BQ9ULI0 1458 aa22.99■■□□□ 1.27
ERN2-202ENST00000457008 KIF21BO75037 1637 aa22.97■■□□□ 1.27
ERN2-202ENST00000457008 UBTFP17480 764 aaKnown RBP22.93■■□□□ 1.26
ERN2-202ENST00000457008 CEP164Q9UPV0 1460 aa22.93■■□□□ 1.26
ERN2-202ENST00000457008 BAZ1BQ9UIG0 1483 aaKnown RBP22.92■■□□□ 1.26
ERN2-202ENST00000457008 TTBK1Q5TCY1 1321 aaPredicted RBP22.87■■□□□ 1.25
ERN2-202ENST00000457008 SCAF1Q9H7N4 1312 aaKnown RBP22.8■■□□□ 1.24
ERN2-202ENST00000457008 TOP2BQ02880 1626 aa22.76■■□□□ 1.23
ERN2-202ENST00000457008 CLIP1P30622 1438 aa22.76■■□□□ 1.23
ERN2-202ENST00000457008 RAPGEF2Q9Y4G8 1499 aa22.72■■□□□ 1.23
ERN2-202ENST00000457008 VPS8Q8N3P4 1428 aa22.72■■□□□ 1.23
ERN2-202ENST00000457008 BIVM-ERCC5R4GMW8 1640 aa22.7■■□□□ 1.23
ERN2-202ENST00000457008 DIEXFQ68CQ4 756 aaKnown RBP22.65■■□□□ 1.22
ERN2-202ENST00000457008 HMGXB3Q12766 1538 aa22.61■■□□□ 1.21
ERN2-202ENST00000457008 ERICH3Q5RHP9 1530 aa22.58■■□□□ 1.21
ERN2-202ENST00000457008 ACIN1Q9UKV3 1341 aaKnown RBP22.56■■□□□ 1.2
ERN2-202ENST00000457008 NCAPD3P42695 1498 aa22.55■■□□□ 1.2
ERN2-202ENST00000457008 PRXQ9BXM0 1461 aa22.54■■□□□ 1.2
ERN2-202ENST00000457008 NEUROD1Q13562 356 aa22.5■■□□□ 1.19
ERN2-202ENST00000457008 ZNF316A6NFI3 1004 aaPredicted RBP22.49■■□□□ 1.19
ERN2-202ENST00000457008 CUX1P39880 1505 aa22.48■■□□□ 1.19
ERN2-202ENST00000457008 HNRNPUL2Q1KMD3 747 aaKnown RBP22.48■■□□□ 1.19
ERN2-202ENST00000457008 PELP1Q8IZL8 1130 aaKnown RBP22.45■■□□□ 1.18
ERN2-202ENST00000457008 ARAP1Q96P48 1450 aa22.45■■□□□ 1.18
ERN2-202ENST00000457008 APLP2Q06481 763 aa22.44■■□□□ 1.18
ERN2-202ENST00000457008 CFTRP13569 1480 aa22.4■■□□□ 1.18
ERN2-202ENST00000457008 CENPBP07199 599 aaPredicted RBP22.39■■□□□ 1.18
ERN2-202ENST00000457008 RANGAP1P46060 587 aaPredicted RBP22.36■■□□□ 1.17
ERN2-202ENST00000457008 KIF27Q86VH2 1401 aa22.36■■□□□ 1.17
ERN2-202ENST00000457008 PRDM2Q13029 1718 aa22.32■■□□□ 1.16
ERN2-202ENST00000457008 GTF3C3Q9Y5Q9 886 aa22.25■■□□□ 1.15
ERN2-202ENST00000457008 RRBP1Q9P2E9 1410 aaKnown RBP22.23■■□□□ 1.15
ERN2-202ENST00000457008 CLSPNQ9HAW4 1339 aa22.23■■□□□ 1.15
ERN2-202ENST00000457008 KANK4Q5T7N3 995 aaPredicted RBP22.22■■□□□ 1.15
ERN2-202ENST00000457008 ARHGAP35Q9NRY4 1499 aa22.22■■□□□ 1.15
ERN2-202ENST00000457008 DHX57Q6P158 1386 aaKnown RBP22.2■■□□□ 1.15
ERN2-202ENST00000457008 CUX2O14529 1486 aa22.16■■□□□ 1.14
ERN2-202ENST00000457008 MIER1Q8N108 512 aa22.15■■□□□ 1.14
ERN2-202ENST00000457008 IGF1RP08069 1367 aa22.1■■□□□ 1.13
ERN2-202ENST00000457008 CADPSQ9ULU8 1353 aa22.07■■□□□ 1.12
ERN2-202ENST00000457008 CCNB3Q8WWL7 1395 aa22.07■■□□□ 1.12
ERN2-202ENST00000457008 MAP3K1Q13233 1512 aa22.05■■□□□ 1.12
ERN2-202ENST00000457008 FGD5Q6ZNL6 1462 aa22.04■■□□□ 1.12
ERN2-202ENST00000457008 YTHDC1Q96MU7 727 aaKnown RBP22.03■■□□□ 1.12
ERN2-202ENST00000457008 TIAM1Q13009 1591 aa22.03■■□□□ 1.12
ERN2-202ENST00000457008 CARMIL1Q5VZK9 1371 aa21.98■■□□□ 1.11
ERN2-202ENST00000457008 LRRC9Q6ZRR7 1453 aa21.91■■□□□ 1.1
ERN2-202ENST00000457008 CFAP43Q8NDM7 1665 aa21.91■■□□□ 1.1
ERN2-202ENST00000457008 CC2D2AQ9P2K1 1620 aa21.9■■□□□ 1.1
ERN2-202ENST00000457008 FANCD2Q9BXW9 1451 aa21.88■■□□□ 1.09
ERN2-202ENST00000457008 MAPKBP1O60336 1514 aa21.87■■□□□ 1.09
ERN2-202ENST00000457008 RAB3GAP2Q9H2M9 1393 aa21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms