Protein–RNA interactions for Protein: Q9Y2R4

DDX52, Probable ATP-dependent RNA helicase DDX52, humanhuman

Known RBP eCLIP

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX52Q9Y2R4 NDE1-210ENST00000574163 352 ntTSL 311.64□□□□□ -0.556e-6■■□□□ 13.9
DDX52Q9Y2R4 COPB1-201ENST00000249923 3481 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.566e-6■■□□□ 13.9
DDX52Q9Y2R4 SSBP3-215ENST00000533946 431 ntTSL 311.52□□□□□ -0.576e-6■■□□□ 13.9
DDX52Q9Y2R4 NDE1-207ENST00000573203 762 ntTSL 310.75□□□□□ -0.696e-6■■□□□ 13.9
DDX52Q9Y2R4 COPB1-211ENST00000534234 1584 ntTSL 510.57□□□□□ -0.726e-6■■□□□ 13.9
DDX52Q9Y2R4 NDE1-201ENST00000396354 3221 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.736e-6■■□□□ 13.9
DDX52Q9Y2R4 CTSB-205ENST00000505496 540 ntTSL 410.39□□□□□ -0.756e-6■■□□□ 13.9
DDX52Q9Y2R4 COPB1-210ENST00000533533 537 ntTSL 410.22□□□□□ -0.776e-6■■□□□ 13.9
DDX52Q9Y2R4 COPB1-202ENST00000439561 3382 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.836e-6■■□□□ 13.9
DDX52Q9Y2R4 NDE1-202ENST00000396355 3936 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.986e-6■■□□□ 13.9
DDX52Q9Y2R4 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.436e-6■■□□□ 13.9
DDX52Q9Y2R4 COPB1-212ENST00000534771 576 ntTSL 40.71□□□□□ -2.36e-6■■□□□ 13.9
DDX52Q9Y2R4 GAS5-209ENST00000430245 723 ntTSL 3 BASIC17.26■□□□□ 0.352e-11■■□□□ 13.9
DDX52Q9Y2R4 GAS5-222ENST00000451607 1007 ntTSL 5 BASIC13.41□□□□□ -0.262e-11■■□□□ 13.9
DDX52Q9Y2R4 GAS5-224ENST00000454068 688 ntTSL 5 BASIC11.68□□□□□ -0.542e-11■■□□□ 13.9
DDX52Q9Y2R4 GAS5-214ENST00000436656 822 ntTSL 311.32□□□□□ -0.62e-11■■□□□ 13.9
DDX52Q9Y2R4 GAS5-216ENST00000443799 897 ntTSL 511.32□□□□□ -0.62e-11■■□□□ 13.9
DDX52Q9Y2R4 GAS5-210ENST00000431268 1698 ntTSL 210.47□□□□□ -0.732e-11■■□□□ 13.9
DDX52Q9Y2R4 GAS5-203ENST00000416952 799 ntTSL 29.91□□□□□ -0.822e-11■■□□□ 13.9
DDX52Q9Y2R4 GAS5-219ENST00000449289 542 ntTSL 3 BASIC9.54□□□□□ -0.882e-11■■□□□ 13.9
DDX52Q9Y2R4 GAS5-220ENST00000449589 712 ntTSL 39.54□□□□□ -0.882e-11■■□□□ 13.9
DDX52Q9Y2R4 GAS5-226ENST00000455838 632 ntTSL 29.54□□□□□ -0.882e-11■■□□□ 13.9
DDX52Q9Y2R4 GAS5-227ENST00000456293 583 ntTSL 38.54□□□□□ -1.042e-11■■□□□ 13.9
DDX52Q9Y2R4 GAS5-211ENST00000432536 959 ntTSL 2 BASIC8.42□□□□□ -1.062e-11■■□□□ 13.9
DDX52Q9Y2R4 GAS5-228ENST00000456812 723 ntTSL 38.21□□□□□ -1.12e-11■■□□□ 13.9
DDX52Q9Y2R4 GAS5-206ENST00000422183 745 ntTSL 27.26□□□□□ -1.252e-11■■□□□ 13.9
DDX52Q9Y2R4 GAS5-218ENST00000448718 565 ntTSL 2 BASIC7.04□□□□□ -1.282e-11■■□□□ 13.9
DDX52Q9Y2R4 GAS5-201ENST00000412059 979 ntTSL 56.66□□□□□ -1.342e-11■■□□□ 13.9
DDX52Q9Y2R4 GAS5-205ENST00000422008 497 ntTSL 35.64□□□□□ -1.512e-11■■□□□ 13.9
DDX52Q9Y2R4 GAS5-215ENST00000442067 1114 ntTSL 25.36□□□□□ -1.552e-11■■□□□ 13.9
DDX52Q9Y2R4 GAS5-208ENST00000425771 242 ntTSL 3 BASIC5.07□□□□□ -1.62e-11■■□□□ 13.9
DDX52Q9Y2R4 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.7□□□□□ -1.662e-11■■□□□ 13.9
DDX52Q9Y2R4 GAS5-204ENST00000421068 1060 ntTSL 24.57□□□□□ -1.682e-11■■□□□ 13.9
DDX52Q9Y2R4 GAS5-213ENST00000436285 772 ntTSL 24.12□□□□□ -1.752e-11■■□□□ 13.9
DDX52Q9Y2R4 GAS5-229ENST00000458220 469 ntTSL 23.59□□□□□ -1.832e-11■■□□□ 13.9
DDX52Q9Y2R4 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.84□□□□□ -1.952e-11■■□□□ 13.9
DDX52Q9Y2R4 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.38■□□□□ 0.696e-7■■□□□ 13.9
DDX52Q9Y2R4 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.646e-7■■□□□ 13.9
DDX52Q9Y2R4 RREB1-205ENST00000467782 243 ntTSL 518.99■□□□□ 0.636e-7■■□□□ 13.9
DDX52Q9Y2R4 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.26e-7■■□□□ 13.9
DDX52Q9Y2R4 RREB1-206ENST00000471433 1021 ntTSL 515.7■□□□□ 0.16e-7■■□□□ 13.9
DDX52Q9Y2R4 RREB1-209ENST00000491191 998 ntTSL 515.7■□□□□ 0.16e-7■■□□□ 13.9
DDX52Q9Y2R4 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC14.3□□□□□ -0.126e-7■■□□□ 13.9
DDX52Q9Y2R4 NUP210-202ENST00000420141 3134 ntTSL 1 (best)25.59■■□□□ 1.691e-6■■□□□ 13.8
DDX52Q9Y2R4 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.031e-6■■□□□ 13.8
DDX52Q9Y2R4 LARP1-208ENST00000518892 399 ntTSL 325.31■■□□□ 1.641e-7■■□□□ 13.8
DDX52Q9Y2R4 LARP1-202ENST00000517616 501 ntTSL 53.83□□□□□ -1.81e-7■■□□□ 13.8
DDX52Q9Y2R4 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC29.95■■■□□ 2.394e-7■■□□□ 13.8
DDX52Q9Y2R4 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC26.85■■□□□ 1.894e-7■■□□□ 13.8
DDX52Q9Y2R4 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.864e-7■■□□□ 13.8
DDX52Q9Y2R4 R3HDM4-205ENST00000589445 705 ntTSL 326.61■■□□□ 1.854e-7■■□□□ 13.8
DDX52Q9Y2R4 R3HDM4-206ENST00000590454 1006 ntTSL 325.47■■□□□ 1.674e-7■■□□□ 13.8
DDX52Q9Y2R4 R3HDM4-204ENST00000589428 1704 ntTSL 325.1■■□□□ 1.614e-7■■□□□ 13.8
DDX52Q9Y2R4 AC010536.2-201ENST00000563036 338 ntTSL 3 BASIC10.48□□□□□ -0.733e-6■■□□□ 13.8
DDX52Q9Y2R4 IGFL2-AS1-201ENST00000594027 294 ntTSL 313.03□□□□□ -0.323e-6■■□□□ 13.8
DDX52Q9Y2R4 IGFL2-AS1-205ENST00000599817 340 ntTSL 212.82□□□□□ -0.363e-6■■□□□ 13.8
DDX52Q9Y2R4 IGFL2-AS1-203ENST00000598518 1037 ntTSL 1 (best) BASIC12.32□□□□□ -0.443e-6■■□□□ 13.8
DDX52Q9Y2R4 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.483e-6■■□□□ 13.7
DDX52Q9Y2R4 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.91□□□□□ -0.023e-6■■□□□ 13.7
DDX52Q9Y2R4 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC14.64□□□□□ -0.073e-6■■□□□ 13.7
DDX52Q9Y2R4 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.153e-6■■□□□ 13.7
DDX52Q9Y2R4 SATB2-207ENST00000463386 372 ntTSL 413.01□□□□□ -0.333e-6■■□□□ 13.7
DDX52Q9Y2R4 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.071e-6■■□□□ 13.7
DDX52Q9Y2R4 DGCR8-202ENST00000383024 4419 ntTSL 5 BASIC13.2□□□□□ -0.31e-6■■□□□ 13.7
DDX52Q9Y2R4 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC33.08■■■□□ 2.897e-6■■□□□ 13.7
DDX52Q9Y2R4 GUK1-218ENST00000469973 795 ntTSL 230.73■■■□□ 2.517e-6■■□□□ 13.7
DDX52Q9Y2R4 SH2B1-208ENST00000563591 588 ntTSL 226.96■■□□□ 1.912e-7■■□□□ 13.7
DDX52Q9Y2R4 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC25.47■■□□□ 1.677e-6■■□□□ 13.7
DDX52Q9Y2R4 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC25.13■■□□□ 1.617e-6■■□□□ 13.7
DDX52Q9Y2R4 STAU1-208ENST00000437404 1085 ntTSL 1 (best)24.37■■□□□ 1.497e-6■■□□□ 13.7
DDX52Q9Y2R4 SCAF8-204ENST00000461219 677 ntTSL 524.25■■□□□ 1.477e-6■■□□□ 13.7
DDX52Q9Y2R4 C17orf62-224ENST00000582456 545 ntTSL 423.35■■□□□ 1.337e-6■■□□□ 13.7
DDX52Q9Y2R4 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.337e-6■■□□□ 13.7
DDX52Q9Y2R4 C17orf62-208ENST00000577696 656 ntTSL 423.3■■□□□ 1.327e-6■■□□□ 13.7
DDX52Q9Y2R4 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.37e-6■■□□□ 13.7
DDX52Q9Y2R4 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC22.73■■□□□ 1.237e-6■■□□□ 13.7
DDX52Q9Y2R4 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.187e-6■■□□□ 13.7
DDX52Q9Y2R4 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC22.13■■□□□ 1.137e-6■■□□□ 13.7
DDX52Q9Y2R4 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.117e-6■■□□□ 13.7
DDX52Q9Y2R4 C17orf62-228ENST00000583242 600 ntTSL 421.88■■□□□ 1.097e-6■■□□□ 13.7
DDX52Q9Y2R4 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.087e-6■■□□□ 13.7
DDX52Q9Y2R4 C17orf62-217ENST00000578941 1079 ntTSL 1 (best)21.4■■□□□ 1.027e-6■■□□□ 13.7
DDX52Q9Y2R4 C17orf62-226ENST00000582608 559 ntTSL 421.22■□□□□ 0.997e-6■■□□□ 13.7
DDX52Q9Y2R4 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC21.15■□□□□ 0.987e-6■■□□□ 13.7
DDX52Q9Y2R4 C17orf62-229ENST00000583359 896 ntTSL 520.68■□□□□ 0.97e-6■■□□□ 13.7
DDX52Q9Y2R4 MAN2A2-221ENST00000560451 5124 ntTSL 1 (best)20.65■□□□□ 0.97e-6■■□□□ 13.7
DDX52Q9Y2R4 ITGA5-213ENST00000553071 1013 ntTSL 1 (best)20.35■□□□□ 0.857e-6■■□□□ 13.7
DDX52Q9Y2R4 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC20.15■□□□□ 0.827e-6■■□□□ 13.7
DDX52Q9Y2R4 C17orf62-225ENST00000582545 470 ntTSL 420.1■□□□□ 0.817e-6■■□□□ 13.7
DDX52Q9Y2R4 C17orf62-207ENST00000577471 573 ntTSL 420.1■□□□□ 0.817e-6■■□□□ 13.7
DDX52Q9Y2R4 C17orf62-213ENST00000578064 548 ntTSL 420.03■□□□□ 0.87e-6■■□□□ 13.7
DDX52Q9Y2R4 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.797e-6■■□□□ 13.7
DDX52Q9Y2R4 C17orf62-222ENST00000582395 565 ntTSL 419.92■□□□□ 0.787e-6■■□□□ 13.7
DDX52Q9Y2R4 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC19.74■□□□□ 0.757e-6■■□□□ 13.7
DDX52Q9Y2R4 C17orf62-240ENST00000585115 609 ntTSL 419.73■□□□□ 0.757e-6■■□□□ 13.7
DDX52Q9Y2R4 DHX9-206ENST00000483416 814 ntTSL 519.68■□□□□ 0.747e-6■■□□□ 13.7
DDX52Q9Y2R4 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.747e-6■■□□□ 13.7
DDX52Q9Y2R4 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.697e-6■■□□□ 13.7
DDX52Q9Y2R4 DGCR8-207ENST00000491892 630 ntTSL 219.09■□□□□ 0.657e-6■■□□□ 13.7
DDX52Q9Y2R4 C17orf62-209ENST00000577707 534 ntTSL 419.01■□□□□ 0.637e-6■■□□□ 13.7
Retrieved 100 of 4,483 protein–RNA pairs in 74.1 ms