RNA–Protein interactions for RNA: ENST00000518892.1

LARP1-208, Transcript of La ribonucleoprotein domain family member 1, humanhuman

TSL 3

Gene LARP1, Length 399 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LARP1-208ENST00000518892 NISCHQ9Y2I1 1504 aa52.03■■■■■ 5.92
LARP1-208ENST00000518892 CCDC180Q9P1Z9 1646 aa46.28■■■■■ 5
LARP1-208ENST00000518892 ABCC9O60706 1549 aa45.42■■■■■ 4.86
LARP1-208ENST00000518892 RB1CC1Q8TDY2 1594 aa43.59■■■■■ 4.57
LARP1-208ENST00000518892 NACADO15069 1562 aa43.54■■■■■ 4.56
LARP1-208ENST00000518892 DCAF8L2P0C7V8 631 aa43.46■■■■■ 4.55
LARP1-208ENST00000518892 ZCCHC6Q5VYS8 1495 aaKnown RBP43.3■■■■■ 4.52
LARP1-208ENST00000518892 MYO15BQ96JP2 1530 aa43.26■■■■■ 4.52
LARP1-208ENST00000518892 DCAF1Q9Y4B6 1507 aa43.03■■■■■ 4.48
LARP1-208ENST00000518892 UNC13AQ9UPW8 1703 aa42.74■■■■■ 4.43
LARP1-208ENST00000518892 PABPN1Q86U42 306 aaKnown RBP eCLIP42.45■■■■■ 4.39
LARP1-208ENST00000518892 BICRAQ9NZM4 1560 aa42.39■■■■■ 4.38
LARP1-208ENST00000518892 SCRIBQ14160 1630 aa42.2■■■■■ 4.35
LARP1-208ENST00000518892 DNAJC5BQ9UF47 199 aa41.94■■■■■ 4.3
LARP1-208ENST00000518892 SHROOM4Q9ULL8 1493 aa41.79■■■■■ 4.28
LARP1-208ENST00000518892 EIF4G1Q04637 1599 aaKnown RBP41.21■■■■■ 4.19
LARP1-208ENST00000518892 CC2D2AQ9P2K1 1620 aa41.1■■■■■ 4.17
LARP1-208ENST00000518892 CECR2Q9BXF3 1484 aa40.81■■■■■ 4.12
LARP1-208ENST00000518892 SMARCA4P51532 1647 aa40.38■■■■■ 4.06
LARP1-208ENST00000518892 BAZ1AQ9NRL2 1556 aaPredicted RBP40.28■■■■■ 4.04
LARP1-208ENST00000518892 NCAPD3P42695 1498 aa40.22■■■■■ 4.03
LARP1-208ENST00000518892 ATAD2BQ9ULI0 1458 aa40.21■■■■■ 4.03
LARP1-208ENST00000518892 MROH2BQ7Z745 1585 aa40.12■■■■■ 4.01
LARP1-208ENST00000518892 SMARCA2P51531 1590 aa40.1■■■■■ 4.01
LARP1-208ENST00000518892 PEG3Q9GZU2 1588 aa40.01■■■■■ 4
LARP1-208ENST00000518892 HMGXB3Q12766 1538 aa39.96■■■■□ 3.99
LARP1-208ENST00000518892 BAZ1BQ9UIG0 1483 aaKnown RBP39.81■■■■□ 3.96
LARP1-208ENST00000518892 WIZO95785 1651 aa39.68■■■■□ 3.94
LARP1-208ENST00000518892 RSF1Q96T23 1441 aaPredicted RBP39.61■■■■□ 3.93
LARP1-208ENST00000518892 NESP48681 1621 aa39.31■■■■□ 3.88
LARP1-208ENST00000518892 TOP2AP11388 1531 aaKnown RBP39.19■■■■□ 3.86
LARP1-208ENST00000518892 LAMC3Q9Y6N6 1575 aa39.12■■■■□ 3.85
LARP1-208ENST00000518892 ERCC6Q03468 1493 aa39.07■■■■□ 3.85
LARP1-208ENST00000518892 CADPSQ9ULU8 1353 aa39.02■■■■□ 3.84
LARP1-208ENST00000518892 PDS5BQ9NTI5 1447 aa38.84■■■■□ 3.81
LARP1-208ENST00000518892 KIF21AQ7Z4S6 1674 aa38.83■■■■□ 3.81
LARP1-208ENST00000518892 CCDC88BA6NC98 1476 aa38.79■■■■□ 3.8
LARP1-208ENST00000518892 CFTRP13569 1480 aa38.77■■■■□ 3.8
LARP1-208ENST00000518892 CUX2O14529 1486 aa38.75■■■■□ 3.79
LARP1-208ENST00000518892 THOC2Q8NI27 1593 aaKnown RBP38.71■■■■□ 3.79
LARP1-208ENST00000518892 FANCD2Q9BXW9 1451 aa38.54■■■■□ 3.76
LARP1-208ENST00000518892 CEP164Q9UPV0 1460 aa38.47■■■■□ 3.75
LARP1-208ENST00000518892 MRC2Q9UBG0 1479 aa38.47■■■■□ 3.75
LARP1-208ENST00000518892 PRDM2Q13029 1718 aa38.46■■■■□ 3.75
LARP1-208ENST00000518892 SUPT5HO00267 1087 aaKnown RBP38.45■■■■□ 3.75
LARP1-208ENST00000518892 WDR62O43379 1518 aa38.38■■■■□ 3.73
LARP1-208ENST00000518892 URB2Q14146 1524 aaKnown RBP38.22■■■■□ 3.71
LARP1-208ENST00000518892 TOPBP1Q92547 1522 aa37.95■■■■□ 3.67
LARP1-208ENST00000518892 ABCC8Q09428 1581 aa37.88■■■■□ 3.65
LARP1-208ENST00000518892 DNMBPQ6XZF7 1577 aa37.86■■■■□ 3.65
LARP1-208ENST00000518892 DNAJC5Q9H3Z4 198 aa37.8■■■■□ 3.64
LARP1-208ENST00000518892 IFT140Q96RY7 1462 aa37.7■■■■□ 3.63
LARP1-208ENST00000518892 CUX1P39880 1505 aa37.63■■■■□ 3.61
LARP1-208ENST00000518892 POLA1P09884 1462 aaPredicted RBP37.61■■■■□ 3.61
LARP1-208ENST00000518892 ZNF608Q9ULD9 1512 aaPredicted RBP37.61■■■■□ 3.61
LARP1-208ENST00000518892 TARBP1Q13395 1621 aaKnown RBP37.57■■■■□ 3.6
LARP1-208ENST00000518892 FGD5Q6ZNL6 1462 aa37.49■■■■□ 3.59
LARP1-208ENST00000518892 RAD54L2Q9Y4B4 1467 aa37.47■■■■□ 3.59
LARP1-208ENST00000518892 SOGA1O94964 1423 aa37.44■■■■□ 3.58
LARP1-208ENST00000518892 EIF4G3O43432 1585 aaKnown RBP37.39■■■■□ 3.58
LARP1-208ENST00000518892 AQRO60306 1485 aaKnown RBP eCLIP37.37■■■■□ 3.571e-6■■■■□ 26.1
LARP1-208ENST00000518892 WRNQ14191 1432 aaPredicted RBP eCLIP37.29■■■■□ 3.569e-7■■■□□ 17.2
LARP1-208ENST00000518892 TDRD9Q8NDG6 1382 aaKnown RBP37.27■■■■□ 3.56
LARP1-208ENST00000518892 BIVM-ERCC5R4GMW8 1640 aa37.26■■■■□ 3.56
LARP1-208ENST00000518892 SYNJ1O43426 1573 aa37.25■■■■□ 3.55
LARP1-208ENST00000518892 TOP2BQ02880 1626 aa37.25■■■■□ 3.55
LARP1-208ENST00000518892 WDR97A6NE52 1622 aa37.22■■■■□ 3.55
LARP1-208ENST00000518892 OSCARQ8IYS5 282 aa37.15■■■■□ 3.54
LARP1-208ENST00000518892 ABCA10Q8WWZ4 1543 aa37.13■■■■□ 3.53
LARP1-208ENST00000518892 ABCA5Q8WWZ7 1642 aa37■■■■□ 3.51
LARP1-208ENST00000518892 GRIN2BQ13224 1484 aa37■■■■□ 3.51
LARP1-208ENST00000518892 GAPVD1Q14C86 1478 aa37■■■■□ 3.51
LARP1-208ENST00000518892 CHD1O14646 1710 aa36.99■■■■□ 3.51
LARP1-208ENST00000518892 SNAPC4Q5SXM2 1469 aa36.97■■■■□ 3.51
LARP1-208ENST00000518892 PBRM1Q86U86 1689 aa36.94■■■■□ 3.5
LARP1-208ENST00000518892 MAGI1Q96QZ7 1491 aaPredicted RBP36.9■■■■□ 3.5
LARP1-208ENST00000518892 FBLN2P98095 1184 aa36.86■■■■□ 3.49
LARP1-208ENST00000518892 SYNJ2O15056 1496 aa36.77■■■■□ 3.48
LARP1-208ENST00000518892 CHMP7Q8WUX9 453 aaPredicted RBP36.75■■■■□ 3.47
LARP1-208ENST00000518892 ERICH3Q5RHP9 1530 aa36.65■■■■□ 3.46
LARP1-208ENST00000518892 ADAMTS12P58397 1594 aa36.63■■■■□ 3.45
LARP1-208ENST00000518892 RIMBP3CA6NJZ7 1639 aa36.59■■■■□ 3.45
LARP1-208ENST00000518892 RIMBP3BA6NNM3 1639 aa36.59■■■■□ 3.45
LARP1-208ENST00000518892 RIMBP3Q9UFD9 1639 aa36.59■■■■□ 3.45
LARP1-208ENST00000518892 CLASP1Q7Z460 1538 aa36.59■■■■□ 3.45
LARP1-208ENST00000518892 FHAD1B1AJZ9 1412 aa36.56■■■■□ 3.44
LARP1-208ENST00000518892 ARHGEF11O15085 1522 aa36.55■■■■□ 3.44
LARP1-208ENST00000518892 GRIN2AQ12879 1464 aa36.53■■■■□ 3.44
LARP1-208ENST00000518892 KIF27Q86VH2 1401 aa36.5■■■■□ 3.43
LARP1-208ENST00000518892 IGF1RP08069 1367 aa36.46■■■■□ 3.43
LARP1-208ENST00000518892 TRIM41Q8WV44 630 aa36.42■■■■□ 3.42
LARP1-208ENST00000518892 NUP160Q12769 1436 aa36.41■■■■□ 3.42
LARP1-208ENST00000518892 CEP170Q5SW79 1584 aa36.39■■■■□ 3.42
LARP1-208ENST00000518892 CUL7Q14999 1698 aa36.28■■■■□ 3.4
LARP1-208ENST00000518892 ARAP1Q96P48 1450 aa36.27■■■■□ 3.4
LARP1-208ENST00000518892 RUSC2Q8N2Y8 1516 aa36.26■■■■□ 3.4
LARP1-208ENST00000518892 CYB5RLQ6IPT4 315 aa36.23■■■■□ 3.39
LARP1-208ENST00000518892 CARMIL1Q5VZK9 1371 aa36.19■■■■□ 3.38
LARP1-208ENST00000518892 SHROOM2Q13796 1616 aa36.16■■■■□ 3.38
LARP1-208ENST00000518892 ERCC6L2Q5T890 1561 aa36.11■■■■□ 3.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms