RNA–Protein interactions for RNA: ENST00000563591.5

SH2B1-208, Transcript of SH2B adaptor protein 1, humanhuman

TSL 2

Gene SH2B1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2B1-208ENST00000563591 NISCHQ9Y2I1 1504 aa54.86■■■■■ 6.37
SH2B1-208ENST00000563591 CCDC180Q9P1Z9 1646 aa48.54■■■■■ 5.36
SH2B1-208ENST00000563591 ABCC9O60706 1549 aa47.78■■■■■ 5.24
SH2B1-208ENST00000563591 DCAF8L2P0C7V8 631 aa46.13■■■■■ 4.98
SH2B1-208ENST00000563591 RB1CC1Q8TDY2 1594 aa45.81■■■■■ 4.92
SH2B1-208ENST00000563591 NACADO15069 1562 aa45.78■■■■■ 4.92
SH2B1-208ENST00000563591 ZCCHC6Q5VYS8 1495 aaKnown RBP45.65■■■■■ 4.9
SH2B1-208ENST00000563591 MYO15BQ96JP2 1530 aa45.49■■■■■ 4.87
SH2B1-208ENST00000563591 DCAF1Q9Y4B6 1507 aa45.31■■■■■ 4.84
SH2B1-208ENST00000563591 PABPN1Q86U42 306 aaKnown RBP eCLIP44.83■■■■■ 4.77
SH2B1-208ENST00000563591 UNC13AQ9UPW8 1703 aa44.62■■■■■ 4.73
SH2B1-208ENST00000563591 BICRAQ9NZM4 1560 aa44.47■■■■■ 4.71
SH2B1-208ENST00000563591 SCRIBQ14160 1630 aa44.44■■■■■ 4.7
SH2B1-208ENST00000563591 DNAJC5BQ9UF47 199 aa44.05■■■■■ 4.64
SH2B1-208ENST00000563591 SHROOM4Q9ULL8 1493 aa43.89■■■■■ 4.62
SH2B1-208ENST00000563591 EIF4G1Q04637 1599 aaKnown RBP43.29■■■■■ 4.52
SH2B1-208ENST00000563591 CC2D2AQ9P2K1 1620 aa43.11■■■■■ 4.49
SH2B1-208ENST00000563591 CECR2Q9BXF3 1484 aa42.91■■■■■ 4.46
SH2B1-208ENST00000563591 SMARCA4P51532 1647 aa42.48■■■■■ 4.39
SH2B1-208ENST00000563591 BAZ1AQ9NRL2 1556 aaPredicted RBP42.45■■■■■ 4.39
SH2B1-208ENST00000563591 ATAD2BQ9ULI0 1458 aa42.37■■■■■ 4.37
SH2B1-208ENST00000563591 NCAPD3P42695 1498 aa42.36■■■■■ 4.37
SH2B1-208ENST00000563591 MROH2BQ7Z745 1585 aa42.31■■■■■ 4.36
SH2B1-208ENST00000563591 SMARCA2P51531 1590 aa42.22■■■■■ 4.35
SH2B1-208ENST00000563591 PEG3Q9GZU2 1588 aa42.05■■■■■ 4.32
SH2B1-208ENST00000563591 HMGXB3Q12766 1538 aa42■■■■■ 4.31
SH2B1-208ENST00000563591 BAZ1BQ9UIG0 1483 aaKnown RBP41.98■■■■■ 4.31
SH2B1-208ENST00000563591 RSF1Q96T23 1441 aaPredicted RBP41.89■■■■■ 4.3
SH2B1-208ENST00000563591 WIZO95785 1651 aa41.78■■■■■ 4.28
SH2B1-208ENST00000563591 NESP48681 1621 aa41.35■■■■■ 4.21
SH2B1-208ENST00000563591 TOP2AP11388 1531 aaKnown RBP41.33■■■■■ 4.21
SH2B1-208ENST00000563591 CADPSQ9ULU8 1353 aa41.17■■■■■ 4.18
SH2B1-208ENST00000563591 ERCC6Q03468 1493 aa41.15■■■■■ 4.18
SH2B1-208ENST00000563591 LAMC3Q9Y6N6 1575 aa41.09■■■■■ 4.17
SH2B1-208ENST00000563591 SUPT5HO00267 1087 aaKnown RBP41■■■■■ 4.15
SH2B1-208ENST00000563591 CCDC88BA6NC98 1476 aa40.97■■■■■ 4.15
SH2B1-208ENST00000563591 PDS5BQ9NTI5 1447 aa40.95■■■■■ 4.15
SH2B1-208ENST00000563591 CFTRP13569 1480 aa40.86■■■■■ 4.13
SH2B1-208ENST00000563591 KIF21AQ7Z4S6 1674 aa40.66■■■■■ 4.1
SH2B1-208ENST00000563591 CUX2O14529 1486 aa40.64■■■■■ 4.1
SH2B1-208ENST00000563591 FANCD2Q9BXW9 1451 aa40.64■■■■■ 4.1
SH2B1-208ENST00000563591 THOC2Q8NI27 1593 aaKnown RBP40.53■■■■■ 4.08
SH2B1-208ENST00000563591 CEP164Q9UPV0 1460 aa40.53■■■■■ 4.08
SH2B1-208ENST00000563591 MRC2Q9UBG0 1479 aa40.48■■■■■ 4.07
SH2B1-208ENST00000563591 WDR62O43379 1518 aa40.29■■■■■ 4.04
SH2B1-208ENST00000563591 URB2Q14146 1524 aaKnown RBP40.22■■■■■ 4.03
SH2B1-208ENST00000563591 PRDM2Q13029 1718 aa40.21■■■■■ 4.03
SH2B1-208ENST00000563591 TOPBP1Q92547 1522 aa39.96■■■■□ 3.99
SH2B1-208ENST00000563591 ABCC8Q09428 1581 aa39.93■■■■□ 3.98
SH2B1-208ENST00000563591 DNMBPQ6XZF7 1577 aa39.84■■■■□ 3.97
SH2B1-208ENST00000563591 IFT140Q96RY7 1462 aa39.71■■■■□ 3.95
SH2B1-208ENST00000563591 CUX1P39880 1505 aa39.67■■■■□ 3.94
SH2B1-208ENST00000563591 POLA1P09884 1462 aaPredicted RBP39.63■■■■□ 3.94
SH2B1-208ENST00000563591 DNAJC5Q9H3Z4 198 aa39.61■■■■□ 3.93
SH2B1-208ENST00000563591 ZNF608Q9ULD9 1512 aaPredicted RBP39.59■■■■□ 3.93
SH2B1-208ENST00000563591 SOGA1O94964 1423 aa39.57■■■■□ 3.92
SH2B1-208ENST00000563591 FGD5Q6ZNL6 1462 aa39.54■■■■□ 3.92
SH2B1-208ENST00000563591 RAD54L2Q9Y4B4 1467 aa39.54■■■■□ 3.92
SH2B1-208ENST00000563591 TARBP1Q13395 1621 aaKnown RBP39.46■■■■□ 3.91
SH2B1-208ENST00000563591 WRNQ14191 1432 aaPredicted RBP eCLIP39.46■■■■□ 3.91
SH2B1-208ENST00000563591 AQRO60306 1485 aaKnown RBP eCLIP39.42■■■■□ 3.91e-8■■□□□ 13
SH2B1-208ENST00000563591 TDRD9Q8NDG6 1382 aaKnown RBP39.39■■■■□ 3.9
SH2B1-208ENST00000563591 SYNJ1O43426 1573 aa39.28■■■■□ 3.88
SH2B1-208ENST00000563591 TOP2BQ02880 1626 aa39.25■■■■□ 3.87
SH2B1-208ENST00000563591 EIF4G3O43432 1585 aaKnown RBP39.25■■■■□ 3.87
SH2B1-208ENST00000563591 BIVM-ERCC5R4GMW8 1640 aa39.18■■■■□ 3.86
SH2B1-208ENST00000563591 OSCARQ8IYS5 282 aa39.18■■■■□ 3.86
SH2B1-208ENST00000563591 ABCA10Q8WWZ4 1543 aa39.14■■■■□ 3.86
SH2B1-208ENST00000563591 FBLN2P98095 1184 aa39.04■■■■□ 3.84
SH2B1-208ENST00000563591 GAPVD1Q14C86 1478 aa39.04■■■■□ 3.84
SH2B1-208ENST00000563591 WDR97A6NE52 1622 aa39.03■■■■□ 3.84
SH2B1-208ENST00000563591 GRIN2BQ13224 1484 aa39.01■■■■□ 3.84
SH2B1-208ENST00000563591 SNAPC4Q5SXM2 1469 aa38.95■■■■□ 3.83
SH2B1-208ENST00000563591 CHMP7Q8WUX9 453 aaPredicted RBP38.89■■■■□ 3.82
SH2B1-208ENST00000563591 ABCA5Q8WWZ7 1642 aa38.88■■■■□ 3.81
SH2B1-208ENST00000563591 MAGI1Q96QZ7 1491 aaPredicted RBP38.86■■■■□ 3.81
SH2B1-208ENST00000563591 SYNJ2O15056 1496 aa38.74■■■■□ 3.79
SH2B1-208ENST00000563591 PBRM1Q86U86 1689 aa38.73■■■■□ 3.79
SH2B1-208ENST00000563591 CHD1O14646 1710 aa38.71■■■■□ 3.79
SH2B1-208ENST00000563591 TRIM41Q8WV44 630 aa38.69■■■■□ 3.78
SH2B1-208ENST00000563591 KIF27Q86VH2 1401 aa38.64■■■■□ 3.78
SH2B1-208ENST00000563591 ERICH3Q5RHP9 1530 aa38.63■■■■□ 3.77
SH2B1-208ENST00000563591 IGF1RP08069 1367 aa38.59■■■■□ 3.77
SH2B1-208ENST00000563591 FHAD1B1AJZ9 1412 aa38.59■■■■□ 3.77
SH2B1-208ENST00000563591 ADAMTS12P58397 1594 aa38.51■■■■□ 3.76
SH2B1-208ENST00000563591 GRIN2AQ12879 1464 aa38.49■■■■□ 3.75
SH2B1-208ENST00000563591 CLASP1Q7Z460 1538 aa38.38■■■■□ 3.74
SH2B1-208ENST00000563591 RUSC2Q8N2Y8 1516 aa38.37■■■■□ 3.73
SH2B1-208ENST00000563591 ARHGEF11O15085 1522 aa38.36■■■■□ 3.73
SH2B1-208ENST00000563591 NUP160Q12769 1436 aa38.34■■■■□ 3.73
SH2B1-208ENST00000563591 CARMIL1Q5VZK9 1371 aa38.32■■■■□ 3.73
SH2B1-208ENST00000563591 RIMBP3CA6NJZ7 1639 aa38.3■■■■□ 3.72
SH2B1-208ENST00000563591 RIMBP3BA6NNM3 1639 aa38.3■■■■□ 3.72
SH2B1-208ENST00000563591 RIMBP3Q9UFD9 1639 aa38.3■■■■□ 3.72
SH2B1-208ENST00000563591 CEP170Q5SW79 1584 aa38.27■■■■□ 3.72
SH2B1-208ENST00000563591 CHIC1Q5VXU3 224 aa38.25■■■■□ 3.71
SH2B1-208ENST00000563591 CYB5RLQ6IPT4 315 aa38.23■■■■□ 3.71
SH2B1-208ENST00000563591 CUL7Q14999 1698 aa38.18■■■■□ 3.7
SH2B1-208ENST00000563591 JPH4Q96JJ6 628 aa38.12■■■■□ 3.69
SH2B1-208ENST00000563591 ARAP1Q96P48 1450 aa38.07■■■■□ 3.68
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms