Protein–RNA interactions for Protein: Q9Y5H9

PCDHA2, Protocadherin alpha-2, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA2Q9Y5H9 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
PCDHA2Q9Y5H9 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
PCDHA2Q9Y5H9 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
PCDHA2Q9Y5H9 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
PCDHA2Q9Y5H9 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC31.34■■■□□ 2.61
PCDHA2Q9Y5H9 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC31.33■■■□□ 2.61
PCDHA2Q9Y5H9 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC31.33■■■□□ 2.61
PCDHA2Q9Y5H9 AC136428.2-201ENST00000563187 214 ntBASIC31.32■■■□□ 2.6
PCDHA2Q9Y5H9 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC31.32■■■□□ 2.6
PCDHA2Q9Y5H9 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
PCDHA2Q9Y5H9 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC31.27■■■□□ 2.6
PCDHA2Q9Y5H9 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC31.26■■■□□ 2.59
PCDHA2Q9Y5H9 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
PCDHA2Q9Y5H9 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
PCDHA2Q9Y5H9 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
PCDHA2Q9Y5H9 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC31.22■■■□□ 2.59
PCDHA2Q9Y5H9 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
PCDHA2Q9Y5H9 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC31.18■■■□□ 2.58
PCDHA2Q9Y5H9 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
PCDHA2Q9Y5H9 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC31.16■■■□□ 2.58
PCDHA2Q9Y5H9 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC31.16■■■□□ 2.58
PCDHA2Q9Y5H9 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
PCDHA2Q9Y5H9 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC31.15■■■□□ 2.58
PCDHA2Q9Y5H9 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC31.14■■■□□ 2.58
PCDHA2Q9Y5H9 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC31.12■■■□□ 2.57
PCDHA2Q9Y5H9 SUZ12P1-203ENST00000578195 985 ntBASIC31.11■■■□□ 2.57
PCDHA2Q9Y5H9 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
PCDHA2Q9Y5H9 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC31.09■■■□□ 2.57
PCDHA2Q9Y5H9 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC31.08■■■□□ 2.57
PCDHA2Q9Y5H9 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
PCDHA2Q9Y5H9 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
PCDHA2Q9Y5H9 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
PCDHA2Q9Y5H9 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC31.02■■■□□ 2.56
PCDHA2Q9Y5H9 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
PCDHA2Q9Y5H9 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC31.02■■■□□ 2.56
PCDHA2Q9Y5H9 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
PCDHA2Q9Y5H9 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
PCDHA2Q9Y5H9 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
PCDHA2Q9Y5H9 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC31.01■■■□□ 2.55
PCDHA2Q9Y5H9 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC31■■■□□ 2.55
PCDHA2Q9Y5H9 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC30.99■■■□□ 2.55
PCDHA2Q9Y5H9 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC30.99■■■□□ 2.55
PCDHA2Q9Y5H9 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
PCDHA2Q9Y5H9 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC30.98■■■□□ 2.55
PCDHA2Q9Y5H9 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC30.98■■■□□ 2.55
PCDHA2Q9Y5H9 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
PCDHA2Q9Y5H9 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC30.98■■■□□ 2.55
PCDHA2Q9Y5H9 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC30.97■■■□□ 2.55
PCDHA2Q9Y5H9 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC30.97■■■□□ 2.55
PCDHA2Q9Y5H9 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
PCDHA2Q9Y5H9 AL133380.1-201ENST00000506013 324 ntBASIC30.95■■■□□ 2.55
PCDHA2Q9Y5H9 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC30.95■■■□□ 2.55
PCDHA2Q9Y5H9 CAHM-201ENST00000604200 896 ntBASIC30.95■■■□□ 2.55
PCDHA2Q9Y5H9 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.54
PCDHA2Q9Y5H9 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC30.94■■■□□ 2.54
PCDHA2Q9Y5H9 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
PCDHA2Q9Y5H9 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
PCDHA2Q9Y5H9 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
PCDHA2Q9Y5H9 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
PCDHA2Q9Y5H9 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
PCDHA2Q9Y5H9 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC30.89■■■□□ 2.54
PCDHA2Q9Y5H9 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC30.89■■■□□ 2.54
PCDHA2Q9Y5H9 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC30.89■■■□□ 2.53
PCDHA2Q9Y5H9 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
PCDHA2Q9Y5H9 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
PCDHA2Q9Y5H9 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC30.84■■■□□ 2.53
PCDHA2Q9Y5H9 AL391121.1-201ENST00000607967 1349 ntBASIC30.84■■■□□ 2.53
PCDHA2Q9Y5H9 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC30.84■■■□□ 2.53
PCDHA2Q9Y5H9 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC30.83■■■□□ 2.53
PCDHA2Q9Y5H9 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC30.83■■■□□ 2.53
PCDHA2Q9Y5H9 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
PCDHA2Q9Y5H9 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC30.81■■■□□ 2.52
PCDHA2Q9Y5H9 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC30.81■■■□□ 2.52
PCDHA2Q9Y5H9 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC30.8■■■□□ 2.52
PCDHA2Q9Y5H9 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC30.8■■■□□ 2.52
PCDHA2Q9Y5H9 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
PCDHA2Q9Y5H9 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
PCDHA2Q9Y5H9 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC30.77■■■□□ 2.52
PCDHA2Q9Y5H9 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC30.76■■■□□ 2.51
PCDHA2Q9Y5H9 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC30.76■■■□□ 2.51
PCDHA2Q9Y5H9 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC30.75■■■□□ 2.51
PCDHA2Q9Y5H9 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC30.74■■■□□ 2.51
PCDHA2Q9Y5H9 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
PCDHA2Q9Y5H9 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC30.73■■■□□ 2.51
PCDHA2Q9Y5H9 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
PCDHA2Q9Y5H9 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC30.73■■■□□ 2.51
PCDHA2Q9Y5H9 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC30.73■■■□□ 2.51
PCDHA2Q9Y5H9 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
PCDHA2Q9Y5H9 RPS2P35-201ENST00000443417 897 ntBASIC30.71■■■□□ 2.51
PCDHA2Q9Y5H9 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC30.71■■■□□ 2.51
PCDHA2Q9Y5H9 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
PCDHA2Q9Y5H9 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
PCDHA2Q9Y5H9 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
PCDHA2Q9Y5H9 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
PCDHA2Q9Y5H9 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
PCDHA2Q9Y5H9 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
PCDHA2Q9Y5H9 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
PCDHA2Q9Y5H9 EBPL-202ENST00000378268 680 ntTSL 3 BASIC30.63■■■□□ 2.49
PCDHA2Q9Y5H9 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC30.63■■■□□ 2.49
PCDHA2Q9Y5H9 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms