Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC27.21■■□□□ 1.95
PCDHB11Q9Y5F2 KLF16-203ENST00000592313 508 ntTSL 3 BASIC27.21■■□□□ 1.95
PCDHB11Q9Y5F2 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
PCDHB11Q9Y5F2 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
PCDHB11Q9Y5F2 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC27.19■■□□□ 1.94
PCDHB11Q9Y5F2 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
PCDHB11Q9Y5F2 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC27.19■■□□□ 1.94
PCDHB11Q9Y5F2 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC27.18■■□□□ 1.94
PCDHB11Q9Y5F2 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
PCDHB11Q9Y5F2 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
PCDHB11Q9Y5F2 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC27.16■■□□□ 1.94
PCDHB11Q9Y5F2 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC27.14■■□□□ 1.94
PCDHB11Q9Y5F2 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
PCDHB11Q9Y5F2 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
PCDHB11Q9Y5F2 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC27.11■■□□□ 1.93
PCDHB11Q9Y5F2 AC136428.2-201ENST00000563187 214 ntBASIC27.11■■□□□ 1.93
PCDHB11Q9Y5F2 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC27.1■■□□□ 1.93
PCDHB11Q9Y5F2 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC27.07■■□□□ 1.92
PCDHB11Q9Y5F2 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC27.05■■□□□ 1.92
PCDHB11Q9Y5F2 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC27.05■■□□□ 1.92
PCDHB11Q9Y5F2 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC27.05■■□□□ 1.92
PCDHB11Q9Y5F2 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
PCDHB11Q9Y5F2 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC27.04■■□□□ 1.92
PCDHB11Q9Y5F2 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC27.03■■□□□ 1.92
PCDHB11Q9Y5F2 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
PCDHB11Q9Y5F2 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC27.01■■□□□ 1.91
PCDHB11Q9Y5F2 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC27■■□□□ 1.91
PCDHB11Q9Y5F2 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC27■■□□□ 1.91
PCDHB11Q9Y5F2 SUZ12P1-203ENST00000578195 985 ntBASIC26.99■■□□□ 1.91
PCDHB11Q9Y5F2 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
PCDHB11Q9Y5F2 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC26.98■■□□□ 1.91
PCDHB11Q9Y5F2 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
PCDHB11Q9Y5F2 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC26.97■■□□□ 1.91
PCDHB11Q9Y5F2 RPS2P35-201ENST00000443417 897 ntBASIC26.95■■□□□ 1.9
PCDHB11Q9Y5F2 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
PCDHB11Q9Y5F2 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC26.95■■□□□ 1.9
PCDHB11Q9Y5F2 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
PCDHB11Q9Y5F2 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC26.94■■□□□ 1.9
PCDHB11Q9Y5F2 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
PCDHB11Q9Y5F2 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
PCDHB11Q9Y5F2 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
PCDHB11Q9Y5F2 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
PCDHB11Q9Y5F2 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC26.91■■□□□ 1.9
PCDHB11Q9Y5F2 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC26.91■■□□□ 1.9
PCDHB11Q9Y5F2 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
PCDHB11Q9Y5F2 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
PCDHB11Q9Y5F2 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC26.89■■□□□ 1.9
PCDHB11Q9Y5F2 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
PCDHB11Q9Y5F2 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
PCDHB11Q9Y5F2 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC26.87■■□□□ 1.89
PCDHB11Q9Y5F2 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC26.87■■□□□ 1.89
PCDHB11Q9Y5F2 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
PCDHB11Q9Y5F2 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
PCDHB11Q9Y5F2 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
PCDHB11Q9Y5F2 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC26.83■■□□□ 1.89
PCDHB11Q9Y5F2 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC26.82■■□□□ 1.88
PCDHB11Q9Y5F2 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
PCDHB11Q9Y5F2 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC26.82■■□□□ 1.88
PCDHB11Q9Y5F2 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC26.82■■□□□ 1.88
PCDHB11Q9Y5F2 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC26.81■■□□□ 1.88
PCDHB11Q9Y5F2 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC26.8■■□□□ 1.88
PCDHB11Q9Y5F2 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC26.8■■□□□ 1.88
PCDHB11Q9Y5F2 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
PCDHB11Q9Y5F2 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
PCDHB11Q9Y5F2 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
PCDHB11Q9Y5F2 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC26.79■■□□□ 1.88
PCDHB11Q9Y5F2 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC26.77■■□□□ 1.88
PCDHB11Q9Y5F2 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC26.75■■□□□ 1.87
PCDHB11Q9Y5F2 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
PCDHB11Q9Y5F2 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC26.75■■□□□ 1.87
PCDHB11Q9Y5F2 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
PCDHB11Q9Y5F2 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
PCDHB11Q9Y5F2 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC26.73■■□□□ 1.87
PCDHB11Q9Y5F2 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC26.73■■□□□ 1.87
PCDHB11Q9Y5F2 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
PCDHB11Q9Y5F2 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC26.73■■□□□ 1.87
PCDHB11Q9Y5F2 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC26.72■■□□□ 1.87
PCDHB11Q9Y5F2 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC26.7■■□□□ 1.87
PCDHB11Q9Y5F2 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC26.7■■□□□ 1.86
PCDHB11Q9Y5F2 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC26.7■■□□□ 1.86
PCDHB11Q9Y5F2 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
PCDHB11Q9Y5F2 ST7-205ENST00000393446 2114 ntTSL 5 BASIC26.68■■□□□ 1.86
PCDHB11Q9Y5F2 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
PCDHB11Q9Y5F2 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
PCDHB11Q9Y5F2 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC26.67■■□□□ 1.86
PCDHB11Q9Y5F2 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
PCDHB11Q9Y5F2 AP006261.1-201ENST00000584783 668 ntBASIC26.66■■□□□ 1.86
PCDHB11Q9Y5F2 CAHM-201ENST00000604200 896 ntBASIC26.66■■□□□ 1.86
PCDHB11Q9Y5F2 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
PCDHB11Q9Y5F2 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC26.65■■□□□ 1.86
PCDHB11Q9Y5F2 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
PCDHB11Q9Y5F2 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
PCDHB11Q9Y5F2 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC26.64■■□□□ 1.86
PCDHB11Q9Y5F2 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
PCDHB11Q9Y5F2 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
PCDHB11Q9Y5F2 AL133380.1-201ENST00000506013 324 ntBASIC26.61■■□□□ 1.85
PCDHB11Q9Y5F2 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
PCDHB11Q9Y5F2 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC26.6■■□□□ 1.85
PCDHB11Q9Y5F2 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
PCDHB11Q9Y5F2 ST7-202ENST00000323984 2142 ntTSL 5 BASIC26.6■■□□□ 1.85
Retrieved 100 of 98,524 protein–RNA pairs in 8.2 ms