Protein–RNA interactions for Protein: Q9UJ98

STAG3, Cohesin subunit SA-3, humanhuman

Predictions only

Length 1,225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG3Q9UJ98 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC41.12■■■■■ 4.17
STAG3Q9UJ98 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC41.11■■■■■ 4.17
STAG3Q9UJ98 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC41.1■■■■■ 4.17
STAG3Q9UJ98 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC41.1■■■■■ 4.17
STAG3Q9UJ98 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC41.09■■■■■ 4.17
STAG3Q9UJ98 AL133380.1-201ENST00000506013 324 ntBASIC41.09■■■■■ 4.17
STAG3Q9UJ98 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC41.09■■■■■ 4.17
STAG3Q9UJ98 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC41.07■■■■■ 4.17
STAG3Q9UJ98 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC41.05■■■■■ 4.16
STAG3Q9UJ98 HNRNPLP2-201ENST00000568980 1570 ntBASIC41.03■■■■■ 4.16
STAG3Q9UJ98 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC40.96■■■■■ 4.15
STAG3Q9UJ98 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC40.95■■■■■ 4.15
STAG3Q9UJ98 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC40.94■■■■■ 4.14
STAG3Q9UJ98 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC40.93■■■■■ 4.14
STAG3Q9UJ98 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC40.92■■■■■ 4.14
STAG3Q9UJ98 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC40.92■■■■■ 4.14
STAG3Q9UJ98 EBPL-202ENST00000378268 680 ntTSL 3 BASIC40.91■■■■■ 4.14
STAG3Q9UJ98 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC40.89■■■■■ 4.14
STAG3Q9UJ98 MIR3665-201ENST00000578708 105 ntBASIC40.87■■■■■ 4.13
STAG3Q9UJ98 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC40.86■■■■■ 4.13
STAG3Q9UJ98 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC40.85■■■■■ 4.13
STAG3Q9UJ98 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC40.85■■■■■ 4.13
STAG3Q9UJ98 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC40.85■■■■■ 4.13
STAG3Q9UJ98 ABHD17AP4-201ENST00000411545 909 ntBASIC40.84■■■■■ 4.13
STAG3Q9UJ98 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC40.84■■■■■ 4.13
STAG3Q9UJ98 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC40.84■■■■■ 4.13
STAG3Q9UJ98 MIR7108-201ENST00000614319 87 ntBASIC40.84■■■■■ 4.13
STAG3Q9UJ98 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC40.81■■■■■ 4.12
STAG3Q9UJ98 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC40.81■■■■■ 4.12
STAG3Q9UJ98 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC40.77■■■■■ 4.12
STAG3Q9UJ98 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC40.76■■■■■ 4.11
STAG3Q9UJ98 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC40.73■■■■■ 4.11
STAG3Q9UJ98 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC40.72■■■■■ 4.11
STAG3Q9UJ98 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC40.7■■■■■ 4.11
STAG3Q9UJ98 AC087741.3-201ENST00000624270 1347 ntBASIC40.68■■■■■ 4.1
STAG3Q9UJ98 PVT1-219ENST00000523427 938 ntTSL 3 BASIC40.67■■■■■ 4.1
STAG3Q9UJ98 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC40.67■■■■■ 4.1
STAG3Q9UJ98 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC40.67■■■■■ 4.1
STAG3Q9UJ98 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC40.66■■■■■ 4.1
STAG3Q9UJ98 MLEC-202ENST00000412616 841 ntTSL 3 BASIC40.65■■■■■ 4.1
STAG3Q9UJ98 DUX4L28-201ENST00000623687 678 ntBASIC40.64■■■■■ 4.1
STAG3Q9UJ98 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC40.62■■■■■ 4.09
STAG3Q9UJ98 CHML-205ENST00000638160 705 ntTSL 3 BASIC40.58■■■■■ 4.09
STAG3Q9UJ98 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC40.58■■■■■ 4.09
STAG3Q9UJ98 MIR762-201ENST00000390236 83 ntBASIC40.54■■■■■ 4.08
STAG3Q9UJ98 AC044849.2-201ENST00000606596 710 ntBASIC40.54■■■■■ 4.08
STAG3Q9UJ98 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC40.53■■■■■ 4.08
STAG3Q9UJ98 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC40.52■■■■■ 4.08
STAG3Q9UJ98 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC40.52■■■■■ 4.08
STAG3Q9UJ98 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC40.51■■■■■ 4.08
STAG3Q9UJ98 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC40.5■■■■■ 4.07
STAG3Q9UJ98 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC40.49■■■■■ 4.07
STAG3Q9UJ98 AC005559.1-201ENST00000589661 871 ntBASIC40.48■■■■■ 4.07
STAG3Q9UJ98 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC40.45■■■■■ 4.07
STAG3Q9UJ98 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC40.45■■■■■ 4.07
STAG3Q9UJ98 HLA-V-202ENST00000446817 847 ntBASIC40.44■■■■■ 4.06
STAG3Q9UJ98 MBP-237ENST00000579129 1052 ntTSL 5 BASIC40.43■■■■■ 4.06
STAG3Q9UJ98 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC40.43■■■■■ 4.06
STAG3Q9UJ98 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC40.41■■■■■ 4.06
STAG3Q9UJ98 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC40.41■■■■■ 4.06
STAG3Q9UJ98 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC40.4■■■■■ 4.06
STAG3Q9UJ98 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC40.38■■■■■ 4.06
STAG3Q9UJ98 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC40.38■■■■■ 4.05
STAG3Q9UJ98 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC40.36■■■■■ 4.05
STAG3Q9UJ98 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC40.36■■■■■ 4.05
STAG3Q9UJ98 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC40.36■■■■■ 4.05
STAG3Q9UJ98 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC40.36■■■■■ 4.05
STAG3Q9UJ98 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC40.35■■■■■ 4.05
STAG3Q9UJ98 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC40.35■■■■■ 4.05
STAG3Q9UJ98 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC40.35■■■■■ 4.05
STAG3Q9UJ98 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC40.34■■■■■ 4.05
STAG3Q9UJ98 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC40.33■■■■■ 4.05
STAG3Q9UJ98 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC40.32■■■■■ 4.05
STAG3Q9UJ98 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC40.31■■■■■ 4.04
STAG3Q9UJ98 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC40.3■■■■■ 4.04
STAG3Q9UJ98 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC40.29■■■■■ 4.04
STAG3Q9UJ98 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC40.29■■■■■ 4.04
STAG3Q9UJ98 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC40.24■■■■■ 4.03
STAG3Q9UJ98 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC40.24■■■■■ 4.03
STAG3Q9UJ98 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC40.23■■■■■ 4.03
STAG3Q9UJ98 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC40.22■■■■■ 4.03
STAG3Q9UJ98 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC40.22■■■■■ 4.03
STAG3Q9UJ98 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC40.21■■■■■ 4.03
STAG3Q9UJ98 BOD1-206ENST00000480951 814 ntTSL 2 BASIC40.21■■■■■ 4.03
STAG3Q9UJ98 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC40.21■■■■■ 4.03
STAG3Q9UJ98 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC40.19■■■■■ 4.02
STAG3Q9UJ98 ZNRF2P2-203ENST00000454624 420 ntBASIC40.19■■■■■ 4.02
STAG3Q9UJ98 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC40.17■■■■■ 4.02
STAG3Q9UJ98 DENR-202ENST00000455982 1052 ntTSL 5 BASIC40.16■■■■■ 4.02
STAG3Q9UJ98 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC40.16■■■■■ 4.02
STAG3Q9UJ98 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC40.15■■■■■ 4.02
STAG3Q9UJ98 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC40.13■■■■■ 4.02
STAG3Q9UJ98 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC40.13■■■■■ 4.01
STAG3Q9UJ98 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC40.12■■■■■ 4.01
STAG3Q9UJ98 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC40.11■■■■■ 4.01
STAG3Q9UJ98 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC40.09■■■■■ 4.01
STAG3Q9UJ98 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC40.08■■■■■ 4.01
STAG3Q9UJ98 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC40.06■■■■■ 4
STAG3Q9UJ98 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC40.06■■■■■ 4
STAG3Q9UJ98 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC40.05■■■■■ 4
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms