Protein–RNA interactions for Protein: Q9NZI6

TFCP2L1, Transcription factor CP2-like protein 1, humanhuman

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFCP2L1Q9NZI6 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC36.5■■■■□ 3.43
TFCP2L1Q9NZI6 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC36.49■■■■□ 3.43
TFCP2L1Q9NZI6 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC36.49■■■■□ 3.43
TFCP2L1Q9NZI6 AC145285.7-201ENST00000614819 1539 ntBASIC36.49■■■■□ 3.43
TFCP2L1Q9NZI6 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC36.48■■■■□ 3.43
TFCP2L1Q9NZI6 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC36.48■■■■□ 3.43
TFCP2L1Q9NZI6 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC36.48■■■■□ 3.43
TFCP2L1Q9NZI6 ILK-212ENST00000532063 1617 ntTSL 2 BASIC36.48■■■■□ 3.43
TFCP2L1Q9NZI6 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC36.46■■■■□ 3.43
TFCP2L1Q9NZI6 MIR3665-201ENST00000578708 105 ntBASIC36.44■■■■□ 3.42
TFCP2L1Q9NZI6 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC36.44■■■■□ 3.42
TFCP2L1Q9NZI6 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC36.43■■■■□ 3.42
TFCP2L1Q9NZI6 AL133380.1-201ENST00000506013 324 ntBASIC36.43■■■■□ 3.42
TFCP2L1Q9NZI6 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC36.43■■■■□ 3.42
TFCP2L1Q9NZI6 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC36.42■■■■□ 3.42
TFCP2L1Q9NZI6 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC36.42■■■■□ 3.42
TFCP2L1Q9NZI6 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC36.41■■■■□ 3.42
TFCP2L1Q9NZI6 MLEC-202ENST00000412616 841 ntTSL 3 BASIC36.39■■■■□ 3.42
TFCP2L1Q9NZI6 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC36.35■■■■□ 3.41
TFCP2L1Q9NZI6 MBP-237ENST00000579129 1052 ntTSL 5 BASIC36.34■■■■□ 3.41
TFCP2L1Q9NZI6 EBPL-202ENST00000378268 680 ntTSL 3 BASIC36.33■■■■□ 3.41
TFCP2L1Q9NZI6 HLA-V-202ENST00000446817 847 ntBASIC36.33■■■■□ 3.41
TFCP2L1Q9NZI6 AC087741.3-201ENST00000624270 1347 ntBASIC36.31■■■■□ 3.4
TFCP2L1Q9NZI6 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC36.29■■■■□ 3.4
TFCP2L1Q9NZI6 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC36.29■■■■□ 3.4
TFCP2L1Q9NZI6 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC36.26■■■■□ 3.4
TFCP2L1Q9NZI6 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC36.25■■■■□ 3.39
TFCP2L1Q9NZI6 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC36.25■■■■□ 3.39
TFCP2L1Q9NZI6 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC36.24■■■■□ 3.39
TFCP2L1Q9NZI6 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC36.21■■■■□ 3.39
TFCP2L1Q9NZI6 DUX4L28-201ENST00000623687 678 ntBASIC36.21■■■■□ 3.39
TFCP2L1Q9NZI6 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC36.2■■■■□ 3.39
TFCP2L1Q9NZI6 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC36.19■■■■□ 3.38
TFCP2L1Q9NZI6 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC36.19■■■■□ 3.38
TFCP2L1Q9NZI6 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC36.19■■■■□ 3.38
TFCP2L1Q9NZI6 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC36.19■■■■□ 3.38
TFCP2L1Q9NZI6 AC044849.2-201ENST00000606596 710 ntBASIC36.15■■■■□ 3.38
TFCP2L1Q9NZI6 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC36.13■■■■□ 3.37
TFCP2L1Q9NZI6 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC36.13■■■■□ 3.37
TFCP2L1Q9NZI6 CHML-205ENST00000638160 705 ntTSL 3 BASIC36.09■■■■□ 3.37
TFCP2L1Q9NZI6 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC36.08■■■■□ 3.37
TFCP2L1Q9NZI6 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC36.08■■■■□ 3.37
TFCP2L1Q9NZI6 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC36.08■■■■□ 3.37
TFCP2L1Q9NZI6 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC36.07■■■■□ 3.36
TFCP2L1Q9NZI6 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC36.07■■■■□ 3.36
TFCP2L1Q9NZI6 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC36.06■■■■□ 3.36
TFCP2L1Q9NZI6 MIR762-201ENST00000390236 83 ntBASIC36.04■■■■□ 3.36
TFCP2L1Q9NZI6 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC36.01■■■■□ 3.35
TFCP2L1Q9NZI6 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC36■■■■□ 3.35
TFCP2L1Q9NZI6 AC005559.1-201ENST00000589661 871 ntBASIC36■■■■□ 3.35
TFCP2L1Q9NZI6 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC35.97■■■■□ 3.35
TFCP2L1Q9NZI6 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC35.97■■■■□ 3.35
TFCP2L1Q9NZI6 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC35.96■■■■□ 3.35
TFCP2L1Q9NZI6 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC35.96■■■■□ 3.35
TFCP2L1Q9NZI6 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC35.96■■■■□ 3.35
TFCP2L1Q9NZI6 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC35.95■■■■□ 3.35
TFCP2L1Q9NZI6 ZNRF2P2-203ENST00000454624 420 ntBASIC35.93■■■■□ 3.34
TFCP2L1Q9NZI6 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC35.92■■■■□ 3.34
TFCP2L1Q9NZI6 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC35.92■■■■□ 3.34
TFCP2L1Q9NZI6 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC35.92■■■■□ 3.34
TFCP2L1Q9NZI6 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC35.91■■■■□ 3.34
TFCP2L1Q9NZI6 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC35.9■■■■□ 3.34
TFCP2L1Q9NZI6 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC35.9■■■■□ 3.34
TFCP2L1Q9NZI6 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC35.89■■■■□ 3.34
TFCP2L1Q9NZI6 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC35.88■■■■□ 3.33
TFCP2L1Q9NZI6 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC35.87■■■■□ 3.33
TFCP2L1Q9NZI6 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC35.85■■■■□ 3.33
TFCP2L1Q9NZI6 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC35.84■■■■□ 3.33
TFCP2L1Q9NZI6 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC35.84■■■■□ 3.33
TFCP2L1Q9NZI6 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC35.83■■■■□ 3.33
TFCP2L1Q9NZI6 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC35.83■■■■□ 3.33
TFCP2L1Q9NZI6 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC35.83■■■■□ 3.33
TFCP2L1Q9NZI6 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC35.82■■■■□ 3.32
TFCP2L1Q9NZI6 BOD1-206ENST00000480951 814 ntTSL 2 BASIC35.82■■■■□ 3.32
TFCP2L1Q9NZI6 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC35.81■■■■□ 3.32
TFCP2L1Q9NZI6 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC35.81■■■■□ 3.32
TFCP2L1Q9NZI6 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC35.77■■■■□ 3.32
TFCP2L1Q9NZI6 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC35.76■■■■□ 3.32
TFCP2L1Q9NZI6 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC35.73■■■■□ 3.31
TFCP2L1Q9NZI6 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC35.72■■■■□ 3.31
TFCP2L1Q9NZI6 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC35.7■■■■□ 3.31
TFCP2L1Q9NZI6 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC35.7■■■■□ 3.31
TFCP2L1Q9NZI6 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC35.68■■■■□ 3.3
TFCP2L1Q9NZI6 HGH1-207ENST00000628266 258 ntTSL 5 BASIC35.68■■■■□ 3.3
TFCP2L1Q9NZI6 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC35.66■■■■□ 3.3
TFCP2L1Q9NZI6 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC35.64■■■■□ 3.3
TFCP2L1Q9NZI6 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC35.63■■■■□ 3.29
TFCP2L1Q9NZI6 RPS2-202ENST00000526522 924 ntTSL 2 BASIC35.62■■■■□ 3.29
TFCP2L1Q9NZI6 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC35.61■■■■□ 3.29
TFCP2L1Q9NZI6 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC35.6■■■■□ 3.29
TFCP2L1Q9NZI6 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC35.6■■■■□ 3.29
TFCP2L1Q9NZI6 DENR-202ENST00000455982 1052 ntTSL 5 BASIC35.6■■■■□ 3.29
TFCP2L1Q9NZI6 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC35.59■■■■□ 3.29
TFCP2L1Q9NZI6 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC35.57■■■■□ 3.29
TFCP2L1Q9NZI6 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC35.56■■■■□ 3.28
TFCP2L1Q9NZI6 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC35.55■■■■□ 3.28
TFCP2L1Q9NZI6 MIR4449-201ENST00000578365 66 ntBASIC35.55■■■■□ 3.28
TFCP2L1Q9NZI6 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC35.54■■■■□ 3.28
TFCP2L1Q9NZI6 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC35.53■■■■□ 3.28
TFCP2L1Q9NZI6 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC35.51■■■■□ 3.28
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms