Protein–RNA interactions for Protein: Q9NR96

TLR9, Toll-like receptor 9, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR9Q9NR96 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
TLR9Q9NR96 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC30.12■■■□□ 2.41
TLR9Q9NR96 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC30.1■■■□□ 2.41
TLR9Q9NR96 AL133380.1-201ENST00000506013 324 ntBASIC30.1■■■□□ 2.41
TLR9Q9NR96 NRG1-221ENST00000614767 762 ntTSL 5 BASIC30.09■■■□□ 2.41
TLR9Q9NR96 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC30.06■■■□□ 2.4
TLR9Q9NR96 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC30.06■■■□□ 2.4
TLR9Q9NR96 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
TLR9Q9NR96 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
TLR9Q9NR96 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
TLR9Q9NR96 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC30■■■□□ 2.39
TLR9Q9NR96 HNRNPLP2-201ENST00000568980 1570 ntBASIC29.99■■■□□ 2.39
TLR9Q9NR96 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
TLR9Q9NR96 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC29.98■■■□□ 2.39
TLR9Q9NR96 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
TLR9Q9NR96 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC29.98■■■□□ 2.39
TLR9Q9NR96 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC29.94■■■□□ 2.38
TLR9Q9NR96 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC29.93■■■□□ 2.38
TLR9Q9NR96 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC29.93■■■□□ 2.38
TLR9Q9NR96 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC29.93■■■□□ 2.38
TLR9Q9NR96 EBPL-202ENST00000378268 680 ntTSL 3 BASIC29.92■■■□□ 2.38
TLR9Q9NR96 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC29.91■■■□□ 2.38
TLR9Q9NR96 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC29.9■■■□□ 2.38
TLR9Q9NR96 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC29.89■■■□□ 2.38
TLR9Q9NR96 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC29.89■■■□□ 2.38
TLR9Q9NR96 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC29.88■■■□□ 2.37
TLR9Q9NR96 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
TLR9Q9NR96 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC29.85■■■□□ 2.37
TLR9Q9NR96 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC29.85■■■□□ 2.37
TLR9Q9NR96 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC29.85■■■□□ 2.37
TLR9Q9NR96 MIR3665-201ENST00000578708 105 ntBASIC29.85■■■□□ 2.37
TLR9Q9NR96 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC29.83■■■□□ 2.37
TLR9Q9NR96 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC29.82■■■□□ 2.36
TLR9Q9NR96 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC29.81■■■□□ 2.36
TLR9Q9NR96 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC29.8■■■□□ 2.36
TLR9Q9NR96 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC29.76■■■□□ 2.36
TLR9Q9NR96 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC29.76■■■□□ 2.35
TLR9Q9NR96 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
TLR9Q9NR96 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
TLR9Q9NR96 AC087741.3-201ENST00000624270 1347 ntBASIC29.71■■■□□ 2.35
TLR9Q9NR96 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.35
TLR9Q9NR96 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.35
TLR9Q9NR96 ABHD17AP4-201ENST00000411545 909 ntBASIC29.7■■■□□ 2.35
TLR9Q9NR96 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC29.7■■■□□ 2.34
TLR9Q9NR96 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
TLR9Q9NR96 DUX4L28-201ENST00000623687 678 ntBASIC29.69■■■□□ 2.34
TLR9Q9NR96 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
TLR9Q9NR96 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC29.68■■■□□ 2.34
TLR9Q9NR96 MIR7108-201ENST00000614319 87 ntBASIC29.68■■■□□ 2.34
TLR9Q9NR96 CHML-205ENST00000638160 705 ntTSL 3 BASIC29.68■■■□□ 2.34
TLR9Q9NR96 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
TLR9Q9NR96 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
TLR9Q9NR96 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC29.66■■■□□ 2.34
TLR9Q9NR96 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC29.66■■■□□ 2.34
TLR9Q9NR96 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC29.66■■■□□ 2.34
TLR9Q9NR96 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC29.65■■■□□ 2.34
TLR9Q9NR96 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
TLR9Q9NR96 MIR762-201ENST00000390236 83 ntBASIC29.64■■■□□ 2.34
TLR9Q9NR96 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
TLR9Q9NR96 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC29.63■■■□□ 2.33
TLR9Q9NR96 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
TLR9Q9NR96 MLEC-202ENST00000412616 841 ntTSL 3 BASIC29.63■■■□□ 2.33
TLR9Q9NR96 AC044849.2-201ENST00000606596 710 ntBASIC29.61■■■□□ 2.33
TLR9Q9NR96 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
TLR9Q9NR96 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
TLR9Q9NR96 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
TLR9Q9NR96 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC29.6■■■□□ 2.33
TLR9Q9NR96 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC29.6■■■□□ 2.33
TLR9Q9NR96 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC29.6■■■□□ 2.33
TLR9Q9NR96 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC29.6■■■□□ 2.33
TLR9Q9NR96 AC005559.1-201ENST00000589661 871 ntBASIC29.59■■■□□ 2.33
TLR9Q9NR96 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC29.57■■■□□ 2.32
TLR9Q9NR96 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC29.57■■■□□ 2.32
TLR9Q9NR96 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC29.56■■■□□ 2.32
TLR9Q9NR96 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC29.56■■■□□ 2.32
TLR9Q9NR96 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC29.53■■■□□ 2.32
TLR9Q9NR96 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC29.52■■■□□ 2.32
TLR9Q9NR96 PVT1-219ENST00000523427 938 ntTSL 3 BASIC29.52■■■□□ 2.32
TLR9Q9NR96 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
TLR9Q9NR96 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC29.51■■■□□ 2.31
TLR9Q9NR96 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC29.51■■■□□ 2.31
TLR9Q9NR96 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
TLR9Q9NR96 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
TLR9Q9NR96 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC29.47■■■□□ 2.31
TLR9Q9NR96 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
TLR9Q9NR96 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
TLR9Q9NR96 DENR-202ENST00000455982 1052 ntTSL 5 BASIC29.45■■■□□ 2.31
TLR9Q9NR96 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
TLR9Q9NR96 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
TLR9Q9NR96 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC29.42■■■□□ 2.3
TLR9Q9NR96 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC29.42■■■□□ 2.3
TLR9Q9NR96 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC29.42■■■□□ 2.3
TLR9Q9NR96 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC29.42■■■□□ 2.3
TLR9Q9NR96 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC29.41■■■□□ 2.3
TLR9Q9NR96 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC29.4■■■□□ 2.3
TLR9Q9NR96 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC29.4■■■□□ 2.3
TLR9Q9NR96 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC29.4■■■□□ 2.3
TLR9Q9NR96 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC29.39■■■□□ 2.3
TLR9Q9NR96 HLA-V-202ENST00000446817 847 ntBASIC29.37■■■□□ 2.29
TLR9Q9NR96 MBP-237ENST00000579129 1052 ntTSL 5 BASIC29.36■■■□□ 2.29
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms