Protein–RNA interactions for Protein: Q9H8H2

DDX31, Probable ATP-dependent RNA helicase DDX31, humanhuman

Known RBP Predictions only

Length 851 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX31Q9H8H2 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC26.47■■□□□ 1.83
DDX31Q9H8H2 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC26.46■■□□□ 1.83
DDX31Q9H8H2 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC26.46■■□□□ 1.83
DDX31Q9H8H2 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC26.46■■□□□ 1.83
DDX31Q9H8H2 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
DDX31Q9H8H2 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC26.43■■□□□ 1.82
DDX31Q9H8H2 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
DDX31Q9H8H2 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC26.42■■□□□ 1.82
DDX31Q9H8H2 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
DDX31Q9H8H2 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC26.39■■□□□ 1.82
DDX31Q9H8H2 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC26.39■■□□□ 1.81
DDX31Q9H8H2 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC26.38■■□□□ 1.81
DDX31Q9H8H2 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
DDX31Q9H8H2 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC26.38■■□□□ 1.81
DDX31Q9H8H2 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC26.37■■□□□ 1.81
DDX31Q9H8H2 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC26.36■■□□□ 1.81
DDX31Q9H8H2 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
DDX31Q9H8H2 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC26.34■■□□□ 1.81
DDX31Q9H8H2 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
DDX31Q9H8H2 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC26.33■■□□□ 1.8
DDX31Q9H8H2 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
DDX31Q9H8H2 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
DDX31Q9H8H2 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
DDX31Q9H8H2 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC26.29■■□□□ 1.8
DDX31Q9H8H2 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC26.29■■□□□ 1.8
DDX31Q9H8H2 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
DDX31Q9H8H2 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC26.28■■□□□ 1.8
DDX31Q9H8H2 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC26.28■■□□□ 1.8
DDX31Q9H8H2 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
DDX31Q9H8H2 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
DDX31Q9H8H2 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
DDX31Q9H8H2 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
DDX31Q9H8H2 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC26.23■■□□□ 1.79
DDX31Q9H8H2 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
DDX31Q9H8H2 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC26.22■■□□□ 1.79
DDX31Q9H8H2 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC26.22■■□□□ 1.79
DDX31Q9H8H2 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
DDX31Q9H8H2 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC26.2■■□□□ 1.79
DDX31Q9H8H2 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC26.2■■□□□ 1.78
DDX31Q9H8H2 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC26.19■■□□□ 1.78
DDX31Q9H8H2 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC26.19■■□□□ 1.78
DDX31Q9H8H2 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC26.19■■□□□ 1.78
DDX31Q9H8H2 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC26.19■■□□□ 1.78
DDX31Q9H8H2 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
DDX31Q9H8H2 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
DDX31Q9H8H2 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
DDX31Q9H8H2 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
DDX31Q9H8H2 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
DDX31Q9H8H2 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC26.17■■□□□ 1.78
DDX31Q9H8H2 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
DDX31Q9H8H2 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC26.16■■□□□ 1.78
DDX31Q9H8H2 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
DDX31Q9H8H2 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
DDX31Q9H8H2 AC120057.4-201ENST00000624722 1615 ntBASIC26.15■■□□□ 1.78
DDX31Q9H8H2 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC26.15■■□□□ 1.78
DDX31Q9H8H2 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
DDX31Q9H8H2 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
DDX31Q9H8H2 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC26.13■■□□□ 1.77
DDX31Q9H8H2 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
DDX31Q9H8H2 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC26.1■■□□□ 1.77
DDX31Q9H8H2 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
DDX31Q9H8H2 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC26.09■■□□□ 1.77
DDX31Q9H8H2 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
DDX31Q9H8H2 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
DDX31Q9H8H2 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
DDX31Q9H8H2 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC26.06■■□□□ 1.76
DDX31Q9H8H2 KLF16-203ENST00000592313 508 ntTSL 3 BASIC26.04■■□□□ 1.76
DDX31Q9H8H2 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC26.04■■□□□ 1.76
DDX31Q9H8H2 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC26.03■■□□□ 1.76
DDX31Q9H8H2 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
DDX31Q9H8H2 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC26.02■■□□□ 1.76
DDX31Q9H8H2 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
DDX31Q9H8H2 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
DDX31Q9H8H2 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC26■■□□□ 1.75
DDX31Q9H8H2 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
DDX31Q9H8H2 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC26■■□□□ 1.75
DDX31Q9H8H2 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC26■■□□□ 1.75
DDX31Q9H8H2 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC25.99■■□□□ 1.75
DDX31Q9H8H2 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
DDX31Q9H8H2 ST7-205ENST00000393446 2114 ntTSL 5 BASIC25.97■■□□□ 1.75
DDX31Q9H8H2 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC25.97■■□□□ 1.75
DDX31Q9H8H2 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC25.97■■□□□ 1.75
DDX31Q9H8H2 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
DDX31Q9H8H2 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC25.96■■□□□ 1.75
DDX31Q9H8H2 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC25.91■■□□□ 1.74
DDX31Q9H8H2 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC25.91■■□□□ 1.74
DDX31Q9H8H2 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
DDX31Q9H8H2 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
DDX31Q9H8H2 ST7-202ENST00000323984 2142 ntTSL 5 BASIC25.88■■□□□ 1.73
DDX31Q9H8H2 ST7-207ENST00000393449 2127 ntTSL 5 BASIC25.88■■□□□ 1.73
DDX31Q9H8H2 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC25.88■■□□□ 1.73
DDX31Q9H8H2 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC25.86■■□□□ 1.73
DDX31Q9H8H2 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC25.86■■□□□ 1.73
DDX31Q9H8H2 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC25.85■■□□□ 1.73
DDX31Q9H8H2 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
DDX31Q9H8H2 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
DDX31Q9H8H2 AL133380.1-201ENST00000506013 324 ntBASIC25.84■■□□□ 1.73
DDX31Q9H8H2 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC25.84■■□□□ 1.73
DDX31Q9H8H2 RARRES2P7-201ENST00000567349 469 ntBASIC25.84■■□□□ 1.73
DDX31Q9H8H2 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC25.84■■□□□ 1.73
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms