Protein–RNA interactions for Protein: Q9H3P2

NELFA, Negative elongation factor A, humanhuman

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELFAQ9H3P2 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC24.63■■□□□ 1.53
NELFAQ9H3P2 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC24.63■■□□□ 1.53
NELFAQ9H3P2 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC24.63■■□□□ 1.53
NELFAQ9H3P2 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
NELFAQ9H3P2 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC24.61■■□□□ 1.53
NELFAQ9H3P2 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
NELFAQ9H3P2 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
NELFAQ9H3P2 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC24.61■■□□□ 1.53
NELFAQ9H3P2 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
NELFAQ9H3P2 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC24.6■■□□□ 1.53
NELFAQ9H3P2 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC24.6■■□□□ 1.53
NELFAQ9H3P2 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC24.58■■□□□ 1.53
NELFAQ9H3P2 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
NELFAQ9H3P2 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC24.57■■□□□ 1.52
NELFAQ9H3P2 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
NELFAQ9H3P2 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC24.56■■□□□ 1.52
NELFAQ9H3P2 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC24.54■■□□□ 1.52
NELFAQ9H3P2 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC24.53■■□□□ 1.52
NELFAQ9H3P2 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC24.51■■□□□ 1.51
NELFAQ9H3P2 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
NELFAQ9H3P2 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC24.5■■□□□ 1.51
NELFAQ9H3P2 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC24.5■■□□□ 1.51
NELFAQ9H3P2 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC24.5■■□□□ 1.51
NELFAQ9H3P2 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC24.5■■□□□ 1.51
NELFAQ9H3P2 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC24.49■■□□□ 1.51
NELFAQ9H3P2 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
NELFAQ9H3P2 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC24.45■■□□□ 1.51
NELFAQ9H3P2 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC24.45■■□□□ 1.51
NELFAQ9H3P2 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
NELFAQ9H3P2 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC24.44■■□□□ 1.5
NELFAQ9H3P2 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC24.44■■□□□ 1.5
NELFAQ9H3P2 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC24.43■■□□□ 1.5
NELFAQ9H3P2 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
NELFAQ9H3P2 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
NELFAQ9H3P2 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC24.42■■□□□ 1.5
NELFAQ9H3P2 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
NELFAQ9H3P2 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
NELFAQ9H3P2 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
NELFAQ9H3P2 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
NELFAQ9H3P2 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
NELFAQ9H3P2 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC24.37■■□□□ 1.49
NELFAQ9H3P2 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
NELFAQ9H3P2 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
NELFAQ9H3P2 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
NELFAQ9H3P2 KLF16-203ENST00000592313 508 ntTSL 3 BASIC24.36■■□□□ 1.49
NELFAQ9H3P2 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC24.35■■□□□ 1.49
NELFAQ9H3P2 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC24.34■■□□□ 1.49
NELFAQ9H3P2 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC24.34■■□□□ 1.49
NELFAQ9H3P2 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
NELFAQ9H3P2 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC24.33■■□□□ 1.49
NELFAQ9H3P2 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC24.33■■□□□ 1.49
NELFAQ9H3P2 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC24.31■■□□□ 1.48
NELFAQ9H3P2 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
NELFAQ9H3P2 RARRES2P7-201ENST00000567349 469 ntBASIC24.3■■□□□ 1.48
NELFAQ9H3P2 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
NELFAQ9H3P2 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC24.29■■□□□ 1.48
NELFAQ9H3P2 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC24.29■■□□□ 1.48
NELFAQ9H3P2 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC24.29■■□□□ 1.48
NELFAQ9H3P2 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
NELFAQ9H3P2 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC24.28■■□□□ 1.48
NELFAQ9H3P2 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
NELFAQ9H3P2 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC24.26■■□□□ 1.47
NELFAQ9H3P2 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
NELFAQ9H3P2 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
NELFAQ9H3P2 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
NELFAQ9H3P2 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
NELFAQ9H3P2 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
NELFAQ9H3P2 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC24.24■■□□□ 1.47
NELFAQ9H3P2 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC24.24■■□□□ 1.47
NELFAQ9H3P2 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
NELFAQ9H3P2 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC24.23■■□□□ 1.47
NELFAQ9H3P2 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
NELFAQ9H3P2 AC120057.4-201ENST00000624722 1615 ntBASIC24.23■■□□□ 1.47
NELFAQ9H3P2 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC24.23■■□□□ 1.47
NELFAQ9H3P2 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
NELFAQ9H3P2 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC24.22■■□□□ 1.47
NELFAQ9H3P2 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
NELFAQ9H3P2 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
NELFAQ9H3P2 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
NELFAQ9H3P2 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
NELFAQ9H3P2 SETD8P1-201ENST00000623146 1180 ntBASIC24.2■■□□□ 1.46
NELFAQ9H3P2 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
NELFAQ9H3P2 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC24.19■■□□□ 1.46
NELFAQ9H3P2 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
NELFAQ9H3P2 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
NELFAQ9H3P2 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
NELFAQ9H3P2 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
NELFAQ9H3P2 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC24.15■■□□□ 1.46
NELFAQ9H3P2 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC24.15■■□□□ 1.46
NELFAQ9H3P2 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
NELFAQ9H3P2 ST7-205ENST00000393446 2114 ntTSL 5 BASIC24.13■■□□□ 1.45
NELFAQ9H3P2 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
NELFAQ9H3P2 AL133380.1-201ENST00000506013 324 ntBASIC24.13■■□□□ 1.45
NELFAQ9H3P2 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC24.12■■□□□ 1.45
NELFAQ9H3P2 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC24.12■■□□□ 1.45
NELFAQ9H3P2 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC24.11■■□□□ 1.45
NELFAQ9H3P2 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
NELFAQ9H3P2 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC24.1■■□□□ 1.45
NELFAQ9H3P2 AC136428.2-201ENST00000563187 214 ntBASIC24.1■■□□□ 1.45
NELFAQ9H3P2 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms