Protein–RNA interactions for Protein: Q9H269

VPS16, Vacuolar protein sorting-associated protein 16 homolog, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16Q9H269 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
VPS16Q9H269 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
VPS16Q9H269 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC30.57■■■□□ 2.48
VPS16Q9H269 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC30.55■■■□□ 2.48
VPS16Q9H269 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
VPS16Q9H269 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC30.52■■■□□ 2.48
VPS16Q9H269 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC30.51■■■□□ 2.47
VPS16Q9H269 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC30.5■■■□□ 2.47
VPS16Q9H269 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
VPS16Q9H269 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC30.5■■■□□ 2.47
VPS16Q9H269 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
VPS16Q9H269 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
VPS16Q9H269 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC30.47■■■□□ 2.47
VPS16Q9H269 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
VPS16Q9H269 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
VPS16Q9H269 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
VPS16Q9H269 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC30.45■■■□□ 2.47
VPS16Q9H269 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.46
VPS16Q9H269 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC30.44■■■□□ 2.46
VPS16Q9H269 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
VPS16Q9H269 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
VPS16Q9H269 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
VPS16Q9H269 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
VPS16Q9H269 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC30.39■■■□□ 2.46
VPS16Q9H269 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
VPS16Q9H269 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
VPS16Q9H269 ZNRF2P1-201ENST00000441407 443 ntBASIC30.38■■■□□ 2.45
VPS16Q9H269 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
VPS16Q9H269 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC30.37■■■□□ 2.45
VPS16Q9H269 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC30.37■■■□□ 2.45
VPS16Q9H269 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC30.37■■■□□ 2.45
VPS16Q9H269 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC30.35■■■□□ 2.45
VPS16Q9H269 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
VPS16Q9H269 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
VPS16Q9H269 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC30.33■■■□□ 2.45
VPS16Q9H269 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
VPS16Q9H269 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
VPS16Q9H269 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
VPS16Q9H269 AC120057.4-201ENST00000624722 1615 ntBASIC30.32■■■□□ 2.44
VPS16Q9H269 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC30.31■■■□□ 2.44
VPS16Q9H269 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC30.31■■■□□ 2.44
VPS16Q9H269 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC30.31■■■□□ 2.44
VPS16Q9H269 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC30.3■■■□□ 2.44
VPS16Q9H269 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC30.27■■■□□ 2.44
VPS16Q9H269 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC30.26■■■□□ 2.43
VPS16Q9H269 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
VPS16Q9H269 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC30.24■■■□□ 2.43
VPS16Q9H269 MVK-208ENST00000539696 608 ntTSL 5 BASIC30.24■■■□□ 2.43
VPS16Q9H269 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC30.22■■■□□ 2.43
VPS16Q9H269 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC30.21■■■□□ 2.43
VPS16Q9H269 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC30.19■■■□□ 2.42
VPS16Q9H269 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
VPS16Q9H269 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
VPS16Q9H269 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC30.17■■■□□ 2.42
VPS16Q9H269 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC30.16■■■□□ 2.42
VPS16Q9H269 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
VPS16Q9H269 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC30.14■■■□□ 2.42
VPS16Q9H269 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC30.13■■■□□ 2.41
VPS16Q9H269 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC30.12■■■□□ 2.41
VPS16Q9H269 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
VPS16Q9H269 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC30.11■■■□□ 2.41
VPS16Q9H269 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
VPS16Q9H269 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC30.11■■■□□ 2.41
VPS16Q9H269 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
VPS16Q9H269 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
VPS16Q9H269 DYNLL1-208ENST00000550178 581 ntBASIC30.07■■■□□ 2.4
VPS16Q9H269 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
VPS16Q9H269 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
VPS16Q9H269 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
VPS16Q9H269 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC30.05■■■□□ 2.4
VPS16Q9H269 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
VPS16Q9H269 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC30.03■■■□□ 2.4
VPS16Q9H269 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
VPS16Q9H269 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
VPS16Q9H269 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
VPS16Q9H269 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
VPS16Q9H269 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC30■■■□□ 2.39
VPS16Q9H269 ABCB10P1-201ENST00000614297 2181 ntBASIC30■■■□□ 2.39
VPS16Q9H269 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
VPS16Q9H269 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
VPS16Q9H269 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
VPS16Q9H269 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC29.96■■■□□ 2.39
VPS16Q9H269 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC29.96■■■□□ 2.39
VPS16Q9H269 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC29.94■■■□□ 2.38
VPS16Q9H269 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC29.93■■■□□ 2.38
VPS16Q9H269 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
VPS16Q9H269 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
VPS16Q9H269 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC29.91■■■□□ 2.38
VPS16Q9H269 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC29.91■■■□□ 2.38
VPS16Q9H269 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC29.9■■■□□ 2.38
VPS16Q9H269 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
VPS16Q9H269 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
VPS16Q9H269 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC29.89■■■□□ 2.38
VPS16Q9H269 AL031258.1-201ENST00000623562 325 ntBASIC29.87■■■□□ 2.37
VPS16Q9H269 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC29.86■■■□□ 2.37
VPS16Q9H269 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC29.86■■■□□ 2.37
VPS16Q9H269 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC29.85■■■□□ 2.37
VPS16Q9H269 EBPL-203ENST00000378270 579 ntTSL 2 BASIC29.84■■■□□ 2.37
VPS16Q9H269 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
VPS16Q9H269 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC29.83■■■□□ 2.37
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms